A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IFNW1 location ⇒ 1:210034319-210033757   CU469469,CH242-142L3,1:210028841-210062618
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW1 location ⇒ 1:210071844-210071282   CU469469,CH242-142L3,1:210062719-210118069
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW1 location ⇒ 1:210107139-210106577   CU469469,CH242-142L3,1:210062719-210118069
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW1 location ⇒ 1:210479948-210479386   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFNW2 location ⇒ 1:210071857-210071910   CU469469,CH242-142L3,1:210062719-210118069
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW2 location ⇒ 1:210545842-210545895   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFNW3 location ⇒ 1:210060994-210061097   CU469469,CH242-142L3,1:210028841-210062618
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW3 location ⇒ 1:210290724-210290827   CU651597,CH242-112J16,1:210238405-210311157
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
IFNW3 location ⇒ 1:210404789-210404892   CU651597,CH242-112J16,1:210398404-210404982
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
IFNW3 location ⇒ 1:210569356-210569408   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFNW4 location ⇒ 1:210060994-210061097   CU469469,CH242-142L3,1:210028841-210062618
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW4 location ⇒ 1:210290724-210290827   CU651597,CH242-112J16,1:210238405-210311157
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
IFNW4 location ⇒ 1:210404789-210404892   CU651597,CH242-112J16,1:210398404-210404982
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
IFNW4 location ⇒ 1:210569356-210569408   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFNW5 location ⇒ 1:210060994-210061097   CU469469,CH242-142L3,1:210028841-210062618
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW5 location ⇒ 1:210290724-210290827   CU651597,CH242-112J16,1:210238405-210311157
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
IFNW5 location ⇒ 1:210404789-210404892   CU651597,CH242-112J16,1:210398404-210404982
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
IFNW5 location ⇒ 1:210569356-210569408   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFNW6 location ⇒ 1:210071399-210071965   CU469469,CH242-142L3,1:210062719-210118069
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW6 location ⇒ 1:210106694-210107230   CU469469,CH242-142L3,1:210062719-210118069
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW6 location ⇒ 1:210479503-210480075   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFNW6 location ⇒ 1:210545384-210545956   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFNW7 location ⇒ 1:210010003-210009897   CU074336,CH242-81E23,1:210009003-210015128
(Clone quality: bE81E23 on chr=1; Num_of_Contigs=6; )
IFNW7 location ⇒ 1:210029226-210029332   CU469469,CH242-142L3,1:210028841-210062618
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW7 location ⇒ 1:210060991-210061097   CU469469,CH242-142L3,1:210028841-210062618
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFNW7 location ⇒ 1:210569356-210569408   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFRD1 ENSSSCG00000016646 18:31939460-31962335   CU928378,CH242-57L18,18:31908994-32026468
(Clone quality: bE57L18 on chr=18; Num_of_Contigs=7; )
IFRD1 location ⇒ 18:31940056-31939868   CU928378,CH242-57L18,18:31908994-32026468
(Clone quality: bE57L18 on chr=18; Num_of_Contigs=7; )
IFRD1 location ⇒ 18:31940056-31939868   CU928378,CH242-57L18,18:31908994-32026468
(Clone quality: bE57L18 on chr=18; Num_of_Contigs=7; )
IFRD1 location ⇒ 18:31962310-31962019   CU928378,CH242-57L18,18:31908994-32026468
(Clone quality: bE57L18 on chr=18; Num_of_Contigs=7; )
IFRD1 location ⇒ 18:31962310-31962019   CU928378,CH242-57L18,18:31908994-32026468
(Clone quality: bE57L18 on chr=18; Num_of_Contigs=7; )
IFT122   ENSSSCG00000011589 13:57337813-57388756    
IFT140   ENSSSCG00000008020 3:36002113-36060373   CU694571,CH242-220O7,3:36001073-36124729
(Clone quality: bE220O7 on chr=3; Num_of_Contigs=5; )
IFT52   ENSSSCG00000007364 17:47969886-48007601    
IFT57 ENSSSCG00000011941 13:112357709-112415974    
IFT74   ENSSSCG00000005124 1:205327650-205414645   CU313306,CH242-263I20,1:205257395-205450475
(Clone quality: bE263I20 on chr=1; Num_of_Contigs=1; )
IFT80   ENSSSCG00000011733 13:78873415-78913688    
IFT81   ENSSSCG00000009818 14:31564609-31653974    
IFT88   ENSSSCG00000009270 11:108973-137059    
IgA ENSSSCG00000014360 2:128952333-128952491   CU693462,CH242-200N5,2:128937308-128956225
(Clone quality: bE200N5 on chr=2; Num_of_Contigs=6; )
IgA ENSSSCG00000003017 6:34090685-34099941    
IgA ENSSSCG00000003284 6:41064930-41074740    
IgA ENSSSCG00000005485 1:267724937-267739649   CU407201,CH242-322N22,1:267675230-267763474
(Clone quality: bE322N22 on chr=1; Num_of_Contigs=4; )
IGBP1 location ⇒ X:55019450-55019145   CU487220,CH242-264C4,X:55016691-55022034
(Clone quality: bE264C4 on chr=X; Num_of_Contigs=10; )
IGBP1 location ⇒ X:55042680-55042482   CU487220,CH242-264C4,X:55022135-55082470
(Clone quality: bE264C4 on chr=X; Num_of_Contigs=10; )
IGBP1 location ⇒ X:55050588-55050292   CU487220,CH242-264C4,X:55022135-55082470
(Clone quality: bE264C4 on chr=X; Num_of_Contigs=10; )
IGBP1 location ⇒ X:55051178-55050968   CU487220,CH242-264C4,X:55022135-55082470
(Clone quality: bE264C4 on chr=X; Num_of_Contigs=10; )
IGDCC3   ENSSSCG00000004932 1:170410018-170452342    
IGDCC4   ENSSSCG00000004931 1:170390013-170403202   CU633232,CH242-191H9,1:170387390-170434800
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
IgE ENSSSCG00000006357 4:92750928-92754912   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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