A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
O18762_PIG   ENSSSCG00000005592 1:280125370-280133426   CU633730,CH242-82E3,1:280090425-280133791
(Clone quality: bE82E3 on chr=1; Num_of_Contigs=5; )
O18916_PIG   ENSSSCG00000017748 12:41272513-41545005    
O46422_PIG   ENSSSCG00000018006 12:52321065-52323264   CU896583,CH242-266H2,12:52318419-52326160
(Clone quality: bE266H2 on chr=12; Num_of_Contigs=8; )
O46536_PIG   ENSSSCG00000008766 8:19095682-19096086   CU582884,CH242-26K3,8:19093821-19096630
(Clone quality: bE26K3 on chr=8; Num_of_Contigs=2; )
O46536_PIG   ENSSSCG00000008765 8:18939926-18948728    
O46558_PIG   ENSSSCG00000001694 7:45063966-45064037   CU633430,CH242-74P4,7:45061715-45064923
(Clone quality: bE74P4 on chr=7; Num_of_Contigs=15; )
O46604_PIG   ENSSSCG00000010695 14:137312881-137415111   CU633661,CH242-210O20,14:137234060-137447590
(Clone quality: bE210O20 on chr=14; Num_of_Contigs=2; )
O46604_PIG   ENSSSCG00000010695 14:137312881-137415111   CU633661,CH242-210O20,14:137234060-137447590
(Clone quality: bE210O20 on chr=14; Num_of_Contigs=2; )
O46604_PIG   ENSSSCG00000010698 14:137545133-137610498    
O46604_PIG   ENSSSCG00000010695 14:137312881-137415111   CU633661,CH242-210O20,14:137234060-137447590
(Clone quality: bE210O20 on chr=14; Num_of_Contigs=2; )
O46604_PIG   ENSSSCG00000010698 14:137545133-137610498    
O46604_PIG   ENSSSCG00000010698 14:137545133-137610498    
O46604_PIG   ENSSSCG00000010695 14:137312881-137415111   CU633661,CH242-210O20,14:137234060-137447590
(Clone quality: bE210O20 on chr=14; Num_of_Contigs=2; )
O62629_PIG   ENSSSCG00000013443 2:46842340-46842612   FP236669,CH242-487E14,2:46826661-46859499
(Clone quality: bE487E14 on chr=2; Num_of_Contigs=9; )
O62629_PIG   ENSSSCG00000011908 13:106423890-106424162   CU633666,CH242-229M20,13:106390303-106485096
(Clone quality: bE229M20 on chr=13; Num_of_Contigs=2; )
O62631_PIG   ENSSSCG00000012471 X:70859888-70860160 FP085367,CH242-184K14,X:70742273-70879229
(Clone quality: bE184K14 on chr=X; Num_of_Contigs=1; ) 		 
O62632_PIG   ENSSSCG00000007793 3:16422800-16423072   CU928725,CH242-25P12,3:16421352-16446649
(Clone quality: bE25P12 on chr=3; Num_of_Contigs=8; )
O62660_PIG   ENSSSCG00000017436 12:18905520-18905771   CU929492,CH242-164M20,12:18896495-18909387
(Clone quality: bE164M20 on chr=12; Num_of_Contigs=5; )
O62660_PIG   ENSSSCG00000017442 12:18998656-18998907   CU929492,CH242-164M20,12:18977432-19004793
(Clone quality: bE164M20 on chr=12; Num_of_Contigs=5; )
O62724_PIG   ENSSSCG00000011868 13:103191797-103191937   CU466991,CH242-220A1,13:103185809-103210249
(Clone quality: bE220A1 on chr=13; Num_of_Contigs=5; )
O62737_PIG   ENSSSCG00000004624 1:124590098-124603484   CU468047,CH242-327N5,1:124551351-124620384
(Clone quality: bE327N5 on chr=1; Num_of_Contigs=4; )
O62788_PIG   ENSSSCG00000004804 1:143735142-143736549   CU633172,CH242-367L17,1:143731030-143743680
(Clone quality: bE367L17 on chr=1; Num_of_Contigs=16; )
O77542_PIG   ENSSSCG00000001313 7:26050602-26051564 CU633828,CH242-250L23,7:25997094-26187544
(Clone quality: bE250L23 on chr=7; Num_of_Contigs=12; ) 		 
O77545_PIG   ENSSSCG00000014470 2:137152675-137153619   CU928592,CH242-110I19,2:137146876-137169104
(Clone quality: bE110I19 on chr=2; Num_of_Contigs=15; )
O77545_PIG   ENSSSCG00000014479 2:137291487-137292425   CU928805,CH242-143K11,2:137273070-137326243
(Clone quality: bE143K11 on chr=2; Num_of_Contigs=9; )
O77547_PIG   ENSSSCG00000013822 2:59659899-59660825   FP102479,CH242-142N9,2:59625317-59669553
(Clone quality: bE142N9 on chr=2; Num_of_Contigs=4; )
O77548_PIG   ENSSSCG00000005548 1:276978381-276979506    
O77665_PIG   ENSSSCG00000001460 7:29316379-29326886 CU633196,CH242-203E5,7:29272940-29352095
(Clone quality: bE203E5 on chr=7; Num_of_Contigs=1; ) 		 
O77677_PIG   ENSSSCG00000017312 12:15086224-15086991   CU693465,CH242-266I14,12:15085716-15108218
(Clone quality: bE266I14 on chr=12; Num_of_Contigs=9; )
O77739_PIG   ENSSSCG00000002490 7:124755334-124756812   CU041307,CH242-24A8,7:124696417-124896527
(Clone quality: bE24A8 on chr=7; Num_of_Contigs=5; )
O77739_PIG   ENSSSCG00000002489 7:124671771-124672439   CU302448,CH242-17C18,7:124558761-124696416
(Clone quality: bE17C18 on chr=7; Num_of_Contigs=5; )
O77789_PIG   ENSSSCG00000007744 3:15339526-15341664   FP102627,CH242-216K18,3:15339207-15358620
(Clone quality: bE216K18 on chr=3; Num_of_Contigs=6; )
O97673_PIG   ENSSSCG00000013564 2:50619055-50632124   FP102248,CH242-295L18,2:50597874-50637371
(Clone quality: bE295L18 on chr=2; Num_of_Contigs=7; )
O97673_PIG   ENSSSCG00000013564 2:50619055-50632124   FP102248,CH242-295L18,2:50597874-50637371
(Clone quality: bE295L18 on chr=2; Num_of_Contigs=7; )
OAF   ENSSSCG00000015127 9:46038340-46042576   CU951450,CH242-156D15,9:46026822-46049405
(Clone quality: bE156D15 on chr=9; Num_of_Contigs=11; )
OAS1 ENSSSCG00000009882 14:39194604-39205725   CU468469,CH242-242L24,14:39192866-39211513
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
OAS1 location ⇒ 14:39197872-39197638   CU468469,CH242-242L24,14:39192866-39211513
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
OAS1 location ⇒ 14:39201490-39201193   CU468469,CH242-242L24,14:39192866-39211513
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
OAS1 location ⇒ 14:39202553-39202338   CU468469,CH242-242L24,14:39192866-39211513
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
OAS1 location ⇒ 14:39204691-39204394   CU468469,CH242-242L24,14:39192866-39211513
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
OAS2 ENSSSCG00000009881 14:39137441-39149442    
OAS2 location ⇒ 14:39143723-39144002   CU468469,CH242-242L24,14:39137333-39147770
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
OAS2 location ⇒ 14:39148858-39150112   CU468469,CH242-242L24,14:39147871-39169162
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
OAS2 location ⇒ 14:39188228-39187954   CU468469,CH242-242L24,14:39185321-39192765
(Clone quality: bE242L24 on chr=14; Num_of_Contigs=11; )
OAS2 location ⇒ 14:45097828-45097773   CU405730,CH242-440O24,14:45080063-45256123
(Clone quality: bE440O24 on chr=14; Num_of_Contigs=1; )
OASL ENSSSCG00000009921 14:41061729-41079109    
OASL location ⇒ 14:41061973-41061729   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
OASL location ⇒ 14:41064963-41064719   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
OASL location ⇒ 14:41072999-41072718   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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