A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
7SK   ENSSSCG00000018604 8:17083254-17083572   CU694737,CH242-49O12,8:17070578-17086240
(Clone quality: bE49O12 on chr=8; Num_of_Contigs=3; )
7SK   ENSSSCG00000018539 X:3815855-3816160 CU582811,CH242-403F13,X:3777157-3822581
(Clone quality: bE403F13 on chr=X; Num_of_Contigs=10; ) 		 
7SK   ENSSSCG00000019134 2:112605991-112606302   CU657949,CH242-142E14,2:112578771-112654310
(Clone quality: bE142E14 on chr=2; Num_of_Contigs=12; )
7SK   ENSSSCG00000018596 9:108809071-108809388   FP089545,CH242-181N7,9:108784321-108877315
(Clone quality: bE181N7 on chr=9; Num_of_Contigs=5; )
7SK   ENSSSCG00000018238 15:29296866-29297173   CU915352,CH242-394A12,15:29292911-29308624
(Clone quality: bE394A12 on chr=15; Num_of_Contigs=17; )
7SK   ENSSSCG00000019036 15:51875698-51875999   CU466337,CH242-87K22,15:51869763-51877812
(Clone quality: bE87K22 on chr=15; Num_of_Contigs=10; )
7SK   ENSSSCG00000019074 1:39633228-39633542   CU407243,CH242-427B13,1:39618359-39642586
(Clone quality: bE427B13 on chr=1; Num_of_Contigs=4; )
7SK   ENSSSCG00000018968 8:63917092-63917400   CU694669,CH242-131H20,8:63898083-63927909
(Clone quality: bE131H20 on chr=8; Num_of_Contigs=9; )
7SK   ENSSSCG00000018945 8:54350707-54350988   CU861530,CH242-195P17,8:54288911-54436332
(Clone quality: bE195P17 on chr=8; Num_of_Contigs=2; )
7SK   ENSSSCG00000018561 18:13275259-13275585   CU638836,CH242-199F13,18:13224232-13295613
(Clone quality: bE199F13 on chr=18; Num_of_Contigs=2; )
7SK   ENSSSCG00000019107 13:119016960-119017269   CU861564,CH242-3F17,13:119007461-119049459
(Clone quality: bE3F17 on chr=13; Num_of_Contigs=5; )
7SK   ENSSSCG00000019247 9:60279160-60279469   CU929969,CH242-7J8,9:60239777-60281344
(Clone quality: bE7J8 on chr=9; Num_of_Contigs=6; )
7SK   ENSSSCG00000018836 6:7282647-7282957   CU929768,CH242-317J11,6:7280695-7327056
(Clone quality: bE317J11 on chr=6; Num_of_Contigs=9; )
7SK   ENSSSCG00000019167 6:40932314-40932619 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2) 		 
7SK   ENSSSCG00000018528 7:106818702-106818988   CU640425,CH242-467P21,7:106806930-106859222
(Clone quality: bE467P21 on chr=7; Num_of_Contigs=11; )
7SK   ENSSSCG00000018510 4:96547460-96547758   CU463081,CH242-277L12,4:96443097-96559871
(Clone quality: bE277L12 on chr=4; Num_of_Contigs=2; )
7SK   ENSSSCG00000019200 8:22149845-22150167   CU915507,CH242-458N21,8:22143005-22153669
(Clone quality: bE458N21 on chr=8; Num_of_Contigs=14; )
7SK   ENSSSCG00000018661 14:21187539-21187840   CU468191,CH242-99P23,14:21177895-21204159
(Clone quality: bE99P23 on chr=14; Num_of_Contigs=4; )
7SK   ENSSSCG00000018871 1:223715710-223716028   CU481262,CH242-247K6,1:223702395-223754695
(Clone quality: bE247K6 on chr=1; Num_of_Contigs=3; )
7SK   ENSSSCG00000019239 4:24631483-24631791   CU468508,CH242-62J18,4:24583929-24631905
(Clone quality: bE62J18 on chr=4; Num_of_Contigs=3; )
7SK   ENSSSCG00000018687 1:169359276-169359573   CU062642,CH242-134P7,1:169351551-169370307
(Clone quality: bE134P7 on chr=1; Num_of_Contigs=3; )
7SK   ENSSSCG00000018857 1:247267129-247267445   CU062653,CH242-128J7,1:247251808-247267835
(Clone quality: bE128J7 on chr=1; Num_of_Contigs=2; )
7SK   ENSSSCG00000019242 15:116801349-116801666   CU929812,CH242-470H17,15:116729506-116815721
(Clone quality: bE470H17 on chr=15; Num_of_Contigs=1; )
7SK   ENSSSCG00000018557 2:113982013-113982320   FP102025,CH242-171C14,2:113978490-113985789
(Clone quality: bE171C14 on chr=2; Num_of_Contigs=14; )
7SK   ENSSSCG00000018938 5:48262473-48262805   CU695217,CH242-373K14,5:48258673-48263300
(Clone quality: bE373K14 on chr=5; Num_of_Contigs=22; )
7SK   ENSSSCG00000018933 1:169406818-169407115   CU393546,CH242-229J10,1:169400849-169418566
(Clone quality: bE229J10 on chr=1; Num_of_Contigs=9; )
7SK   ENSSSCG00000018401 9:91463880-91464156   CU856596,CH242-343E8,9:91459055-91464158
(Clone quality: bE343E8 on chr=9; Num_of_Contigs=5; )
7SK   ENSSSCG00000018434 1:120089811-120090134   CU928645,CH242-517E12,1:120057302-120090850
(Clone quality: bE517E12 on chr=1; Num_of_Contigs=7; )
7SK   ENSSSCG00000018785 18:8633820-8634119   FP236740,CH242-273C18,18:8630336-8642076
(Clone quality: bE273C18 on chr=18; Num_of_Contigs=4; )
7SK   ENSSSCG00000019097 6:43008636-43008942   FP102593,CH242-171J19,6:43003816-43012496
(Clone quality: bE171J19 on chr=6; Num_of_Contigs=11; )
7SK   ENSSSCG00000018835 14:133005878-133006182 CT737198,CH242-101L9,14:132896369-133092131
(Clone quality: bE101L9 on chr=14; Num_of_Contigs=2; ) 		 
7SK   ENSSSCG00000018815 13:38541085-38541385   CU928752,CH242-456A19,13:38529645-38543059
(Clone quality: bE456A19 on chr=13; Num_of_Contigs=3; )
7SK   ENSSSCG00000018485 7:100814011-100814335   CT956041,CH242-255G15,7:100778435-100877181
(Clone quality: bE255G15 on chr=7; Num_of_Contigs=4; )
7SK   ENSSSCG00000018421 10:34379504-34379805   CU929727,CH242-22P6,10:34364513-34382962
(Clone quality: bE22P6 on chr=10; Num_of_Contigs=8; )
7SK   ENSSSCG00000018445 2:33671617-33671936   CU464139,CH242-117P24,2:33652344-33781387
(Clone quality: bE117P24 on chr=2; Num_of_Contigs=1; )
7SK   ENSSSCG00000019251 11:24548524-24548815   CU062515,CH242-111E23,11:24503434-24582003
(Clone quality: bE111E23 on chr=11; Num_of_Contigs=4; )
7SK   ENSSSCG00000018768 10:34192021-34192325   FP236717,CH242-325J7,10:34083336-34257870
(Clone quality: bE325J7 on chr=10; Num_of_Contigs=2; )
7SK   ENSSSCG00000018773 9:75107521-75107840   CU855633,CH242-185O1,9:75101869-75117724
(Clone quality: bE185O1 on chr=9; Num_of_Contigs=8; )
7SK   ENSSSCG00000018602 6:12178587-12178882   FP102513,CH242-97F24,6:12133859-12184888
(Clone quality: bE97F24 on chr=6; Num_of_Contigs=5; )
7SK   ENSSSCG00000018919 11:68158012-68158312   FP067343,CH242-29O21,11:68157771-68176124
(Clone quality: bE29O21 on chr=11; Num_of_Contigs=5; )
7SK   ENSSSCG00000018913 2:88889784-88890109   CU855705,CH242-272A12,2:88872617-88896368
(Clone quality: bE272A12 on chr=2; Num_of_Contigs=4; )
7SK   ENSSSCG00000018543 15:87371081-87371358   CU571236,CH242-6F24,15:87352097-87372080
(Clone quality: bE6F24 on chr=15; Num_of_Contigs=10; )
7SK   ENSSSCG00000018851 11:20793743-20794031   CU469292,CH242-391I4,11:20793676-20796140
(Clone quality: bE391I4 on chr=11; Num_of_Contigs=19; )
7SK   ENSSSCG00000019271 10:8443072-8443374   CU861486,CH242-275O21,10:8442366-8447956
(Clone quality: bE275O21 on chr=10; Num_of_Contigs=16; )
7SK   ENSSSCG00000019311 9:10088307-10088611   CU694805,CH242-482G16,9:10046758-10094266
(Clone quality: bE482G16 on chr=9; Num_of_Contigs=7; )
7SK   ENSSSCG00000018476 1:67735325-67735644   CU467589,CH242-469N4,1:67733062-67735877
(Clone quality: bE469N4 on chr=1; Num_of_Contigs=6; )
7SK   ENSSSCG00000019340 8:67588337-67588633   CU672255,CH242-44J17,8:67579217-67618452
(Clone quality: bE44J17 on chr=8; Num_of_Contigs=1; )
7SK   ENSSSCG00000019298 1:223833905-223834223   CU041249,CH242-40J17,1:223809826-224010665
(Clone quality: bE40J17 on chr=1; Num_of_Contigs=1; )
7SK   ENSSSCG00000018427 1:199832099-199832398   FP236550,CH242-412M5,1:199798989-199846674
(Clone quality: bE412M5 on chr=1; Num_of_Contigs=6; )
Go to records:
1-49, 50-100, 101-2

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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