A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 20501 - 20600:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PCDH15 location ⇒ 14:100665461-100665535 CU407218,CH242-373M1,14:100652259-100815328
(Clone quality: bE373M1 on chr=14; Num_of_Contigs=4; )
 
PCDH17 location ⇒ 11:29517687-29517959   CU302260,CH242-182A24,11:29397855-29563952
(Clone quality: bE182A24 on chr=11; Num_of_Contigs=1; )
PCDH17 location ⇒ 11:29550912-29550973   CU302260,CH242-182A24,11:29397855-29563952
(Clone quality: bE182A24 on chr=11; Num_of_Contigs=1; )
PCDH17 location ⇒ 11:29551106-29551280   CU302260,CH242-182A24,11:29397855-29563952
(Clone quality: bE182A24 on chr=11; Num_of_Contigs=1; )
PCDH17 location ⇒ 11:29602478-29602821   CU062514,CH242-110M22,11:29600344-29663820
(Clone quality: bE110M22 on chr=11; Num_of_Contigs=10; )
PCDH18 location ⇒ 8:76525272-76524570   CU468494,CH242-352D19,8:76522147-76540131
(Clone quality: bE352D19 on chr=8; Num_of_Contigs=8; )
PCDH19 location ⇒ X:75424157-75424097   CU463244,CH242-339N13,X:75399598-75441843
(Clone quality: bE339N13 on chr=X; Num_of_Contigs=4; )
PCDH19 location ⇒ X:75490235-75489906   CU463244,CH242-339N13,X:75473475-75495404
(Clone quality: bE339N13 on chr=X; Num_of_Contigs=4; )
PCDH19 location ⇒ X:75493947-75493767   CU463244,CH242-339N13,X:75473475-75495404
(Clone quality: bE339N13 on chr=X; Num_of_Contigs=4; )
PCDH20 location ⇒ 11:33159865-33159362   CU062564,CH242-400M20,11:33157521-33160103
(No clone quality info on )
PCDH21 location ⇒ 14:88780221-88780370   CU633218,CH242-144B15,14:88679736-88865867
(Clone quality: bE144B15 on chr=14; Num_of_Contigs=2; )
PCDH21 location ⇒ 14:88783487-88783654   CU633218,CH242-144B15,14:88679736-88865867
(Clone quality: bE144B15 on chr=14; Num_of_Contigs=2; )
PCDH21 location ⇒ 14:88891199-88891348   CU607038,CH242-240O5,14:88865868-89075009
(Clone quality: bE240O5 on chr=14; Num_of_Contigs=1; )
PCDH21 location ⇒ 14:88894465-88894632   CU607038,CH242-240O5,14:88865868-89075009
(Clone quality: bE240O5 on chr=14; Num_of_Contigs=1; )
PCDH42 location ⇒ 8:18940874-18941278   CU928437,CH242-318K24,8:18939927-18963610
(Clone quality: bE318K24 on chr=8; Num_of_Contigs=2; )
PCDH42 location ⇒ 8:19096086-19095682   CU582884,CH242-26K3,8:19093821-19096630
(Clone quality: bE26K3 on chr=8; Num_of_Contigs=2; )
PCDH7 location ⇒ 8:18942188-18942247   CU928437,CH242-318K24,8:18939927-18963610
(Clone quality: bE318K24 on chr=8; Num_of_Contigs=2; )
PCDH7 location ⇒ 8:19094775-19094716   CU582884,CH242-26K3,8:19093821-19096630
(Clone quality: bE26K3 on chr=8; Num_of_Contigs=2; )
PCDH7 location ⇒ 8:19148684-19148880   CU463909,CH242-187F6,8:19106893-19227254
(Clone quality: bE187F6 on chr=8; Num_of_Contigs=6; )
PCDH7 location ⇒ 8:19362084-19362501   CU466338,CH242-97E7,8:19359775-19378551
(Clone quality: bE97E7 on chr=8; Num_of_Contigs=1; )
PCDH8 location ⇒ 11:27156146-27155587   FP236235,CH242-17B8,11:27154636-27162197
(Clone quality: bE17B8 on chr=11; Num_of_Contigs=6; )
PCDH8 location ⇒ 11:27156379-27156186   FP236235,CH242-17B8,11:27154636-27162197
(Clone quality: bE17B8 on chr=11; Num_of_Contigs=6; )
PCDH9 location ⇒ 11:39194701-39195322   FP102077,CH242-201H8,11:39186720-39215334
(Clone quality: bE201H8 on chr=11; Num_of_Contigs=5; )
PCDH9 location ⇒ 11:39331856-39332477   CU062558,CH242-372L1,11:39324242-39338679
(Clone quality: bE372L1 on chr=11; Num_of_Contigs=15; )
PCDHA location ⇒ 2:129430240-129430451   CU582771,CH242-139E18,2:129424223-129476466
(Clone quality: bE139E18 on chr=2; Num_of_Contigs=14; )
PCDHA location ⇒ 2:129430526-129430926   CU582771,CH242-139E18,2:129424223-129476466
(Clone quality: bE139E18 on chr=2; Num_of_Contigs=14; )
PCDHB1 location ⇒ 2:129484992-129485680   CU582771,CH242-139E18,2:129476567-129508714
(Clone quality: bE139E18 on chr=2; Num_of_Contigs=14; )
PCDHB10 location ⇒ 2:129938304-129938395   CU855722,CH242-107K9,2:129938191-129949315
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHB10 location ⇒ 2:129958994-129959085   CU855722,CH242-107K9,2:129953568-129959136
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHB10 location ⇒ 2:129968241-129968332   CU855722,CH242-107K9,2:129959237-129968352
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHB10 location ⇒ 2:129968583-129968674   CU855722,CH242-107K9,2:129968453-129974459
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHB12 location ⇒ 2:129643885-129643970    
PCDHB12 location ⇒ 2:129653516-129653581   CU972421,CH242-169A19,2:129644071-129653622
(Clone quality: bE169A19 on chr=2; Num_of_Contigs=19; )
PCDHB12 location ⇒ 2:129668172-129668373   CU972421,CH242-169A19,2:129662788-129681591
(Clone quality: bE169A19 on chr=2; Num_of_Contigs=19; )
PCDHB12 location ⇒ 2:129803170-129803371   CU855722,CH242-107K9,2:129802941-129813004
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHB15 location ⇒ 2:129548669-129548722   CU582771,CH242-139E18,2:129546818-129549257
(Clone quality: bE139E18 on chr=2; Num_of_Contigs=14; )
PCDHB15 location ⇒ 2:129666237-129666829   CU972421,CH242-169A19,2:129662788-129681591
(Clone quality: bE169A19 on chr=2; Num_of_Contigs=19; )
PCDHB15 location ⇒ 2:129711333-129711386   CU972421,CH242-169A19,2:129707148-129712682
(Clone quality: bE169A19 on chr=2; Num_of_Contigs=19; )
PCDHB15 location ⇒ 2:129816643-129817235   CU855722,CH242-107K9,2:129813105-129818579
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHGA10 location ⇒ 2:130064264-130064353   CU468962,CH242-385J20,2:130048708-130067538
(Clone quality: bE385J20 on chr=2; Num_of_Contigs=15; )
PCDHGB2 location ⇒ 2:129909399-129908788   CU855722,CH242-107K9,2:129900796-129910052
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHGB7 location ⇒ 2:129900212-129900452   CU855722,CH242-107K9,2:129818680-129900695
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHGB7 location ⇒ 2:129909646-129909886   CU855722,CH242-107K9,2:129900796-129910052
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHGB7 location ⇒ 2:129958803-129959043   CU855722,CH242-107K9,2:129953568-129959136
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHGB7 location ⇒ 2:129968050-129968290   CU855722,CH242-107K9,2:129959237-129968352
(Clone quality: bE107K9 on chr=2; Num_of_Contigs=12; )
PCDHGC3 location ⇒ 2:130036633-130037204   CU468962,CH242-385J20,2:129993001-130042352
(Clone quality: bE385J20 on chr=2; Num_of_Contigs=15; )
PCDHX location ⇒ X:76373571-76375632   CU928627,CH242-204D4,X:76365010-76387026
(Clone quality: bE204D4 on chr=X; Num_of_Contigs=5; )
PCDHX location ⇒ X:76427390-76426804   CU928627,CH242-204D4,X:76407652-76428556
(Clone quality: bE204D4 on chr=X; Num_of_Contigs=5; )
PCDHX location ⇒ X:78242652-78243178   CU861973,CH242-28P8,X:78220777-78243431
(Clone quality: bE28P8 on chr=X; Num_of_Contigs=4; )
PCDHX location ⇒ X:78269435-78269961 CU468400,CH242-230G24,X:78250753-78310970
(Clone quality: bE230G24 on chr=X; Num_of_Contigs=5; )
 
PCLKC location ⇒ 2:70347765-70347693 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; )
 
PCLKC location ⇒ 2:70350239-70349996 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; )
 
PCLKC location ⇒ 2:70352509-70352288 FP101981,CH242-191F5,2:70304317-70501298
(Clone quality: bE191F5 on chr=2; Num_of_Contigs=3; )
 
PCMT1 location ⇒ 1:17162565-17161763   CU571230,CH242-42L8,1:17100560-17179490
(Clone quality: bE42L8 on chr=1; Num_of_Contigs=10; )
PCMT1 location ⇒ 1:17172527-17172309   CU571230,CH242-42L8,1:17100560-17179490
(Clone quality: bE42L8 on chr=1; Num_of_Contigs=10; )
PCMT1 location ⇒ 1:17182981-17182874   CU571230,CH242-42L8,1:17179591-17204757
(Clone quality: bE42L8 on chr=1; Num_of_Contigs=10; )
PCMT1 location ⇒ 1:17232347-17232250   CU571230,CH242-42L8,1:17229321-17232366
(Clone quality: bE42L8 on chr=1; Num_of_Contigs=10; )
PCNA location ⇒ 1:70000949-70000160   CU392850,CH242-150N9,1:69931777-70081701
(Clone quality: bE150N9 on chr=1; Num_of_Contigs=2; )
PCNA location ⇒ 1:70002413-70001432   CU392850,CH242-150N9,1:69931777-70081701
(Clone quality: bE150N9 on chr=1; Num_of_Contigs=2; )
PCTK2 location ⇒ 10:66343616-66345137   CT956084,PigE-149L18,10:66256961-66421506
(Clone quality: bT149L18 on chr=10; Num_of_Contigs=4; )
PCTK2 location ⇒ 10:66345668-66346483   CT956084,PigE-149L18,10:66256961-66421506
(Clone quality: bT149L18 on chr=10; Num_of_Contigs=4; )
PCTK2 location ⇒ 10:66454682-66456213   CT841523,CH242-158A13,10:66421507-66520400
(Clone quality: bE158A13 on chr=10; Num_of_Contigs=4; )
PCTK2 location ⇒ 10:66456744-66457559   CT841523,CH242-158A13,10:66421507-66520400
(Clone quality: bE158A13 on chr=10; Num_of_Contigs=4; )
PDCD10 location ⇒ 13:81532872-81533248    
PDCD10 location ⇒ 13:81556493-81556011   CU469054,CH242-68P3,13:81532872-81586465
(Clone quality: bE68P3 on chr=13; Num_of_Contigs=4; )
PDCD10 location ⇒ 13:81580639-81580428   CU469054,CH242-68P3,13:81532872-81586465
(Clone quality: bE68P3 on chr=13; Num_of_Contigs=4; )
PDCD10 location ⇒ 13:81596701-81596559   CU469054,CH242-68P3,13:81586566-81627091
(Clone quality: bE68P3 on chr=13; Num_of_Contigs=4; )
PDCD1LG2 location ⇒ 1:226477295-226477244   CU457399,CH242-185B23,1:226461602-226481555
(Clone quality: bE185B23 on chr=1; Num_of_Contigs=9; )
PDCD1LG2 location ⇒ 1:226482017-226481878   CU457399,CH242-185B23,1:226481656-226508279
(Clone quality: bE185B23 on chr=1; Num_of_Contigs=9; )
PDCD1LG2 location ⇒ 1:226488266-226487996   CU457399,CH242-185B23,1:226481656-226508279
(Clone quality: bE185B23 on chr=1; Num_of_Contigs=9; )
PDCD1LG2 location ⇒ 1:226503002-226502694   CU457399,CH242-185B23,1:226481656-226508279
(Clone quality: bE185B23 on chr=1; Num_of_Contigs=9; )
PDCD2 location ⇒ 12:34254201-34254080   CU463348,CH242-175J3,12:34165606-34300471
(Clone quality: bE175J3 on chr=12; Num_of_Contigs=1; )
PDCD2 location ⇒ 12:34255216-34254237   CU463348,CH242-175J3,12:34165606-34300471
(Clone quality: bE175J3 on chr=12; Num_of_Contigs=1; )
PDCD4 location ⇒ 14:126919644-126919446   CT737336,CH242-143P15,14:126897173-127111088
(Clone quality: bE143P15 on chr=14; Num_of_Contigs=1; )
PDCD4 location ⇒ 14:126922599-126922482   CT737336,CH242-143P15,14:126897173-127111088
(Clone quality: bE143P15 on chr=14; Num_of_Contigs=1; )
PDCD4 location ⇒ 14:126926564-126926454   CT737336,CH242-143P15,14:126897173-127111088
(Clone quality: bE143P15 on chr=14; Num_of_Contigs=1; )
PDCD4 location ⇒ 14:126926911-126926800   CT737336,CH242-143P15,14:126897173-127111088
(Clone quality: bE143P15 on chr=14; Num_of_Contigs=1; )
PDCD6IP location ⇒ 13:16601366-16601590   CU928095,CH242-177L19,13:16600845-16667490
(Clone quality: bE177L19 on chr=13; Num_of_Contigs=8; )
PDCD6IP location ⇒ 13:16619812-16620064   CU928095,CH242-177L19,13:16600845-16667490
(Clone quality: bE177L19 on chr=13; Num_of_Contigs=8; )
PDCD6IP location ⇒ 13:16634424-16634474   CU928095,CH242-177L19,13:16600845-16667490
(Clone quality: bE177L19 on chr=13; Num_of_Contigs=8; )
PDCD6IP location ⇒ 13:16792901-16792851   CU915600,CH242-8A11,13:16780132-16795932
(Clone quality: bE8A11 on chr=13; Num_of_Contigs=7; )
PDCD7 location ⇒ 1:170190631-170190422   CU856492,CH242-206L6,1:170178720-170216975
(Clone quality: bE206L6 on chr=1; Num_of_Contigs=2; )
PDCD7 location ⇒ 1:170193200-170193144   CU856492,CH242-206L6,1:170178720-170216975
(Clone quality: bE206L6 on chr=1; Num_of_Contigs=2; )
PDCD7 location ⇒ 1:170193391-170193295   CU856492,CH242-206L6,1:170178720-170216975
(Clone quality: bE206L6 on chr=1; Num_of_Contigs=2; )
PDCD7 location ⇒ 1:170199463-170199323   CU856492,CH242-206L6,1:170178720-170216975
(Clone quality: bE206L6 on chr=1; Num_of_Contigs=2; )
PDE3A location ⇒ 5:50415884-50415509   CU463142,CH242-271D14,5:50412364-50416491
(Clone quality: bE271D14 on chr=5; Num_of_Contigs=8; )
PDE3A location ⇒ 5:50425463-50425202   CU463142,CH242-271D14,5:50421461-50434100
(Clone quality: bE271D14 on chr=5; Num_of_Contigs=8; )
PDE3A location ⇒ 5:50469199-50468939   CU463142,CH242-271D14,5:50463398-50471041
(Clone quality: bE271D14 on chr=5; Num_of_Contigs=8; )
PDE3A location ⇒ 5:50723881-50723517   CU407326,CH242-122I24,5:50720698-50895598
(Clone quality: bE122I24 on chr=5; Num_of_Contigs=1; )
PDE4A location ⇒ 2:52940290-52940103   CU993813,CH242-86K24,2:52937567-52943390
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
PDE4A location ⇒ 2:52941105-52941030   CU993813,CH242-86K24,2:52937567-52943390
(Clone quality: bE86K24 on chr=2; Num_of_Contigs=13; )
PDE4A location ⇒ 2:53048825-53048638   CU928523,CH242-307C2,2:53015595-53086293
(Clone quality: bE307C2 on chr=2; Num_of_Contigs=9; )
PDE4A location ⇒ 2:53049640-53049565   CU928523,CH242-307C2,2:53015595-53086293
(Clone quality: bE307C2 on chr=2; Num_of_Contigs=9; )
PDE4B location ⇒ 6:102890272-102890367   CU929681,CH242-117C23,6:102875270-102928411
(Clone quality: bE117C23 on chr=6; Num_of_Contigs=6; )
PDE4B location ⇒ 6:102890505-102890673   CU929681,CH242-117C23,6:102875270-102928411
(Clone quality: bE117C23 on chr=6; Num_of_Contigs=6; )
PDE4B location ⇒ 6:102892761-102892860   CU929681,CH242-117C23,6:102875270-102928411
(Clone quality: bE117C23 on chr=6; Num_of_Contigs=6; )
PDE4B location ⇒ 6:102895175-102895319   CU929681,CH242-117C23,6:102875270-102928411
(Clone quality: bE117C23 on chr=6; Num_of_Contigs=6; )
PDE7A location ⇒ 4:71462266-71462368   CU151843,CH242-168N12,4:71438791-71467081
(Clone quality: bE168N12 on chr=4; Num_of_Contigs=9; )
PDE7A location ⇒ 4:71466078-71466211   CU151843,CH242-168N12,4:71438791-71467081
(Clone quality: bE168N12 on chr=4; Num_of_Contigs=9; )
PDE7A location ⇒ 4:71469037-71469184   CU207226,CH242-348A19,4:71467082-71544703
(Clone quality: bE348A19 on chr=4; Num_of_Contigs=2; )
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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