A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 20101 - 20200:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
NFX1 location ⇒ 10:31657615-31657341   CU856468,CH242-364H6,10:31652479-31664113
(Clone quality: bE364H6 on chr=10; Num_of_Contigs=8; )
NFX1 location ⇒ 10:31660122-31659975   CU856468,CH242-364H6,10:31652479-31664113
(Clone quality: bE364H6 on chr=10; Num_of_Contigs=8; )
NFX1 location ⇒ 10:31673952-31673718   CU856468,CH242-364H6,10:31664214-31675353
(Clone quality: bE364H6 on chr=10; Num_of_Contigs=8; )
NFX1 location ⇒ 10:31721606-31721823   CU856468,CH242-364H6,10:31712098-31743115
(Clone quality: bE364H6 on chr=10; Num_of_Contigs=8; )
NFYA location ⇒ 7:41489520-41489374   CU469417,CH242-21H17,7:41474421-41526727
(Clone quality: bE21H17 on chr=7; Num_of_Contigs=11; )
NFYA location ⇒ 7:41494345-41494197   CU469417,CH242-21H17,7:41474421-41526727
(Clone quality: bE21H17 on chr=7; Num_of_Contigs=11; )
NFYA location ⇒ 7:41718081-41717933   CU468451,CH242-139B20,7:41710942-41752176
(Clone quality: bE139B20 on chr=7; Num_of_Contigs=12; )
NFYA location ⇒ 7:41849252-41849400   CU550655,CH242-156C23,7:41844582-41870669
(Clone quality: bE156C23 on chr=7; Num_of_Contigs=10; )
NFYB location ⇒ 5:75408895-75408691   CU633317,CH242-74P20,5:75405019-75430447
(Clone quality: bE74P20 on chr=5; Num_of_Contigs=9; )
NFYB location ⇒ 5:75412045-75411845   CU633317,CH242-74P20,5:75405019-75430447
(Clone quality: bE74P20 on chr=5; Num_of_Contigs=9; )
NFYB location ⇒ 5:75472181-75472381   CU457468,CH242-236A7,5:75457961-75508819
(Clone quality: bE236A7 on chr=5; Num_of_Contigs=7; )
NFYB location ⇒ 5:75475331-75475535   CU457468,CH242-236A7,5:75457961-75508819
(Clone quality: bE236A7 on chr=5; Num_of_Contigs=7; )
NFYC location ⇒ 6:121808961-121808729   CU466467,CH242-342M8,6:121796725-121878632
(Clone quality: bE342M8 on chr=6; Num_of_Contigs=7; )
NFYC location ⇒ 6:121812715-121812607   CU466467,CH242-342M8,6:121796725-121878632
(Clone quality: bE342M8 on chr=6; Num_of_Contigs=7; )
NFYC location ⇒ 6:121817083-121816919   CU466467,CH242-342M8,6:121796725-121878632
(Clone quality: bE342M8 on chr=6; Num_of_Contigs=7; )
NFYC location ⇒ 6:121820482-121820306   CU466467,CH242-342M8,6:121796725-121878632
(Clone quality: bE342M8 on chr=6; Num_of_Contigs=7; )
NGFB location ⇒ 4:109562665-109562791   CU463898,CH242-57E2,4:109554488-109573826
(Clone quality: bE57E2 on chr=4; Num_of_Contigs=7; )
NGFB location ⇒ 4:109569155-109569616   CU463898,CH242-57E2,4:109554488-109573826
(Clone quality: bE57E2 on chr=4; Num_of_Contigs=7; )
NGFRAP1 location ⇒ X:81970684-81970858   FP101968,CH242-59P14,X:81955507-81971923
(Clone quality: bE59P14 on chr=X; Num_of_Contigs=3; )
NGFRAP1 location ⇒ X:81970923-81971275   FP101968,CH242-59P14,X:81955507-81971923
(Clone quality: bE59P14 on chr=X; Num_of_Contigs=3; )
NID1 location ⇒ 14:56547721-56547817   CU469301,CH242-285P16,14:56545678-56549559
(Clone quality: bE285P16 on chr=14; Num_of_Contigs=19; )
NID1 location ⇒ 14:56550646-56550819   CU469301,CH242-285P16,14:56549660-56554010
(Clone quality: bE285P16 on chr=14; Num_of_Contigs=19; )
NID1 location ⇒ 14:56555339-56555513   CU469301,CH242-285P16,14:56554111-56558843
(Clone quality: bE285P16 on chr=14; Num_of_Contigs=19; )
NID1 location ⇒ 14:56557067-56557225   CU469301,CH242-285P16,14:56554111-56558843
(Clone quality: bE285P16 on chr=14; Num_of_Contigs=19; )
NID2 location ⇒ 1:189959233-189959015   CU210869,CH242-182D2,1:189950015-189979226
(Clone quality: bE182D2 on chr=1; Num_of_Contigs=5; )
NID2 location ⇒ 1:189960656-189960530   CU210869,CH242-182D2,1:189950015-189979226
(Clone quality: bE182D2 on chr=1; Num_of_Contigs=5; )
NID2 location ⇒ 1:189962064-189961905   CU210869,CH242-182D2,1:189950015-189979226
(Clone quality: bE182D2 on chr=1; Num_of_Contigs=5; )
NID2 location ⇒ 1:189963117-189962943   CU210869,CH242-182D2,1:189950015-189979226
(Clone quality: bE182D2 on chr=1; Num_of_Contigs=5; )
NINJ1 location ⇒ 3:37823079-37823177   CU929166,CH242-216L10,3:37813941-37823503
(Clone quality: bE216L10 on chr=3; Num_of_Contigs=21; )
NKRF location ⇒ X:13121-13056   FP236733,PigE-245C13,X:5383-52328
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
NKRF location ⇒ X:1316-1251   FP236733,PigE-245C13,X:1-2951
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
NKRF location ⇒ X:16997-17106   FP236733,PigE-245C13,X:5383-52328
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
NKRF location ⇒ X:5619-5554   FP236733,PigE-245C13,X:5383-52328
(Clone quality: bT245C13 on chr=X; Num_of_Contigs=13; )
NKX2-3 location ⇒ 14:115470507-115470728   CT827848,CH242-276N12,14:115431518-115501704
(Clone quality: bE276N12 on chr=14; Num_of_Contigs=5; )
NKX2-3 location ⇒ 14:115483456-115483804   CT827848,CH242-276N12,14:115431518-115501704
(Clone quality: bE276N12 on chr=14; Num_of_Contigs=5; )
NKX2-5 location ⇒ 16:48435130-48435584   CU928102,CH242-282H22,16:48385360-48486838
(Clone quality: bE282H22 on chr=16; Num_of_Contigs=5; )
NKX2-5 location ⇒ 16:48437074-48437361   CU928102,CH242-282H22,16:48385360-48486838
(Clone quality: bE282H22 on chr=16; Num_of_Contigs=5; )
NKX2-5 location ⇒ 16:48437390-48437475   CU928102,CH242-282H22,16:48385360-48486838
(Clone quality: bE282H22 on chr=16; Num_of_Contigs=5; )
NLGN2 location ⇒ X:56803353-56803497 FP102080,CH242-239N4,X:56731395-56804170
(Clone quality: bE239N4 on chr=X; Num_of_Contigs=2; )
 
NLGN3 location ⇒ X:56822015-56821575   CU468205,CH242-6A14,X:56804171-56849440
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
NLGN3 location ⇒ X:56824649-56824545   CU468205,CH242-6A14,X:56804171-56849440
(Clone quality: bE6A14 on chr=X; Num_of_Contigs=4; )
NLGN4X location ⇒ X:2290157-2289575 FP067403,CH242-212L20,X:2263862-2375275
(Clone quality: bE212L20 on chr=X; Num_of_Contigs=2; )
 
NLK location ⇒ 12:42235044-42235353   CU856701,CH242-327O19,12:42167254-42316869
(Clone quality: bE327O19 on chr=12; Num_of_Contigs=2; )
NLK location ⇒ 12:42327898-42328244   CU927944,CH242-195G7,12:42321494-42331835
(Clone quality: bE195G7 on chr=12; Num_of_Contigs=8; )
NLK location ⇒ 12:42328330-42328837   CU927944,CH242-195G7,12:42321494-42331835
(Clone quality: bE195G7 on chr=12; Num_of_Contigs=8; )
NLK location ⇒ 12:42328892-42329685   CU927944,CH242-195G7,12:42321494-42331835
(Clone quality: bE195G7 on chr=12; Num_of_Contigs=8; )
NLRC4 location ⇒ 3:16084-15975   FP102618,CH242-1B21,3:10473-20929
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
NLRC4 location ⇒ 3:27717-27600   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
NLRC4 location ⇒ 3:27719-27622   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
NLRC4 location ⇒ 3:35364-35429   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
NLRP10 location ⇒ 11:1495245-1495160   CU929510,CH242-273A16,11:1455054-1520978
(Clone quality: bE273A16 on chr=11; Num_of_Contigs=4; )
NLRP10 location ⇒ 11:1714887-1714802   CU062605,CH242-86L16,11:1712947-1720194
(Clone quality: bE86L16 on chr=11; Num_of_Contigs=9; )
NLRP10 location ⇒ 11:1775017-1775102   CU633467,CH242-134D18,11:1741183-1806334
(Clone quality: bE134D18 on chr=11; Num_of_Contigs=6; )
NLRP10 location ⇒ 11:2034054-2034147   FP236535,CH242-504P8,11:2016739-2039047
(Clone quality: bE504P8 on chr=11; Num_of_Contigs=13; )
NLRP11 location ⇒ 6:41899545-41899485   FP236123,CH242-107C1,6:41897439-41901758
(Clone quality: bE107C1 on chr=6; Num_of_Contigs=14; )
NLRP2 location ⇒ 6:40829936-40829870 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2)
 
NLRP2 location ⇒ 6:40834213-40834126 CR853303,PigE-173F2,6:40799672-40950930
(No clone quality info on bT173F2)
 
NLRP2 location ⇒ 6:41150702-41150636   FP102421,CH242-120N16,6:41147540-41161728
(Clone quality: bE120N16 on chr=6; Num_of_Contigs=6; )
NLRP2 location ⇒ 6:41154979-41154892   FP102421,CH242-120N16,6:41147540-41161728
(Clone quality: bE120N16 on chr=6; Num_of_Contigs=6; )
NLRP6 location ⇒ 2:139895175-139895421   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
NLRP6 location ⇒ 2:139896004-139897412   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
NLRP6 location ⇒ 2:139899854-139900018   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
NLRX1 location ⇒ 9:45003289-45003616   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
NLRX1 location ⇒ 9:45009601-45009805   CU639481,CH242-263G17,9:44899832-45096295
(Clone quality: bE263G17 on chr=9; Num_of_Contigs=2; )
NME1 location ⇒ 12:25083617-25083743   CU929012,CH242-205C11,12:25005952-25086974
(Clone quality: bE205C11 on chr=12; Num_of_Contigs=7; )
NME1 location ⇒ 12:25084791-25084897   CU929012,CH242-205C11,12:25005952-25086974
(Clone quality: bE205C11 on chr=12; Num_of_Contigs=7; )
NME1 location ⇒ 12:25087703-25087817   CU929012,CH242-205C11,12:25087075-25089714
(Clone quality: bE205C11 on chr=12; Num_of_Contigs=7; )
NME1 location ⇒ 12:25088860-25088979   CU929012,CH242-205C11,12:25087075-25089714
(Clone quality: bE205C11 on chr=12; Num_of_Contigs=7; )
NME3 location ⇒ 3:35926638-35926778   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NME3 location ⇒ 3:35926899-35927005   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NME3 location ⇒ 3:35927079-35927193   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NME3 location ⇒ 3:35927280-35927727   CU929968,CH242-75C10,3:35920214-35934469
(Clone quality: bE75C10 on chr=3; Num_of_Contigs=6; )
NONO location ⇒ 5:51384934-51385014   FP236566,CH242-295G9,5:51375367-51413729
(Clone quality: bE295G9 on chr=5; Num_of_Contigs=7; )
NOPE location ⇒ 1:170390013-170390169   CU633232,CH242-191H9,1:170387390-170434800
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
NOPE location ⇒ 1:170390810-170391225   CU633232,CH242-191H9,1:170387390-170434800
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
NOPE location ⇒ 1:170391723-170391888   CU633232,CH242-191H9,1:170387390-170434800
(Clone quality: bE191H9 on chr=1; Num_of_Contigs=6; )
NOR-1 location ⇒ 1:253257017-253258335   CU302447,CH242-175O14,1:253251697-253317102
(Clone quality: bE175O14 on chr=1; Num_of_Contigs=4; )
NOR-1 location ⇒ 1:253258377-253258703   CU302447,CH242-175O14,1:253251697-253317102
(Clone quality: bE175O14 on chr=1; Num_of_Contigs=4; )
NOR-1 location ⇒ 1:253258743-253259695   CU302447,CH242-175O14,1:253251697-253317102
(Clone quality: bE175O14 on chr=1; Num_of_Contigs=4; )
NOR-1 location ⇒ 1:253259748-253260308   CU302447,CH242-175O14,1:253251697-253317102
(Clone quality: bE175O14 on chr=1; Num_of_Contigs=4; )
NOS1 location ⇒ 14:134952785-134953377   CU407047,CH242-224G2,14:134885099-135000492
(Clone quality: bE224G2 on chr=14; Num_of_Contigs=3; )
NOS2A location ⇒ 12:42111631-42111507   CU972495,CH242-385A7,12:42107942-42119048
(Clone quality: bE385A7 on chr=12; Num_of_Contigs=10; )
NOS2A location ⇒ 12:42112141-42112052   CU972495,CH242-385A7,12:42107942-42119048
(Clone quality: bE385A7 on chr=12; Num_of_Contigs=10; )
NOS2A location ⇒ 12:42113923-42113713   CU972495,CH242-385A7,12:42107942-42119048
(Clone quality: bE385A7 on chr=12; Num_of_Contigs=10; )
NOS2A location ⇒ 12:42115277-42115163   CU972495,CH242-385A7,12:42107942-42119048
(Clone quality: bE385A7 on chr=12; Num_of_Contigs=10; )
NOS3 location ⇒ 18:5427108-5427250   CU928555,CH242-184M19,18:5424338-5430649
(Clone quality: bE184M19 on chr=18; Num_of_Contigs=14; )
NOS3 location ⇒ 18:5427855-5427997   CU928555,CH242-184M19,18:5424338-5430649
(Clone quality: bE184M19 on chr=18; Num_of_Contigs=14; )
NOS3 location ⇒ 18:5428102-5428277   CU928555,CH242-184M19,18:5424338-5430649
(Clone quality: bE184M19 on chr=18; Num_of_Contigs=14; )
NOS3 location ⇒ 18:5429644-5429841   CU928555,CH242-184M19,18:5424338-5430649
(Clone quality: bE184M19 on chr=18; Num_of_Contigs=14; )
NOSTRIN location ⇒ 15:70722083-70722011   CU694793,CH242-307E23,15:70717644-70724631
(Clone quality: bE307E23 on chr=15; Num_of_Contigs=5; )
NOSTRIN location ⇒ 15:70818295-70818396   FP102141,CH242-244J6,15:70810851-70834740
(Clone quality: bE244J6 on chr=15; Num_of_Contigs=3; )
NOSTRIN location ⇒ 15:70824615-70824743   FP102141,CH242-244J6,15:70810851-70834740
(Clone quality: bE244J6 on chr=15; Num_of_Contigs=3; )
NOSTRIN location ⇒ 15:70830729-70830851   FP102141,CH242-244J6,15:70810851-70834740
(Clone quality: bE244J6 on chr=15; Num_of_Contigs=3; )
NOTCH2 location ⇒ 4:105317060-105317174   CU467688,CH242-208A6,4:105286969-105331340
(Clone quality: bE208A6 on chr=4; Num_of_Contigs=6; )
NOTCH2 location ⇒ 4:105318390-105318902   CU467688,CH242-208A6,4:105286969-105331340
(Clone quality: bE208A6 on chr=4; Num_of_Contigs=6; )
NOV location ⇒ 4:19250637-19250371   CU463890,CH242-408I20,4:19229347-19260371
(Clone quality: bE408I20 on chr=4; Num_of_Contigs=3; )
NOV location ⇒ 4:19253859-19253658   CU463890,CH242-408I20,4:19229347-19260371
(Clone quality: bE408I20 on chr=4; Num_of_Contigs=3; )
NOX5 location ⇒ 1:174408873-174408704   CU695157,CH242-312E11,1:174407611-174411031
(Clone quality: bE312E11 on chr=1; Num_of_Contigs=14; )
NOX5 location ⇒ 1:174443968-174443918   CU695157,CH242-312E11,1:174440252-174450248
(Clone quality: bE312E11 on chr=1; Num_of_Contigs=14; )
NOX5 location ⇒ 1:174489576-174489745   CU062545,CH242-25K14,1:174470801-174490652
(Clone quality: bE25K14 on chr=1; Num_of_Contigs=7; )
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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