A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ITGA6 location ⇒ 15:73543394-73543569   CU469224,CH242-428F9,15:73538662-73549739
(Clone quality: bE428F9 on chr=15; Num_of_Contigs=15; )
ITGA6 location ⇒ 15:73547155-73547266   CU469224,CH242-428F9,15:73538662-73549739
(Clone quality: bE428F9 on chr=15; Num_of_Contigs=15; )
ITGA6 location ⇒ 15:73554112-73554243   CU469224,CH242-428F9,15:73552664-73556281
(Clone quality: bE428F9 on chr=15; Num_of_Contigs=15; )
ITGA7 ENSSSCG00000000358 5:20034034-20055068    
ITGA7 location ⇒ 5:20041201-20041096   CU855487,CH242-124H13,5:20020708-20045638
(Clone quality: bE124H13 on chr=5; Num_of_Contigs=8; )
ITGA7 location ⇒ 5:20041651-20041568   CU855487,CH242-124H13,5:20020708-20045638
(Clone quality: bE124H13 on chr=5; Num_of_Contigs=8; )
ITGA7 location ⇒ 5:20041836-20041753   CU855487,CH242-124H13,5:20020708-20045638
(Clone quality: bE124H13 on chr=5; Num_of_Contigs=8; )
ITGA7 location ⇒ 5:20042018-20041916   CU855487,CH242-124H13,5:20020708-20045638
(Clone quality: bE124H13 on chr=5; Num_of_Contigs=8; )
ITGA8 ENSSSCG00000011046 10:44061783-44230707    
ITGA8 location ⇒ 10:37742254-37742147   CU855566,CH242-284D2,10:37713844-37774179
(Clone quality: bE284D2 on chr=10; Num_of_Contigs=3; )
ITGA8 location ⇒ 10:42694380-42694453   CU463896,CH242-517O20,10:42644652-42699963
(Clone quality: bE517O20 on chr=10; Num_of_Contigs=8; )
ITGA8 location ⇒ 10:47054710-47054632   CU928644,CH242-496K3,10:47051111-47072289
(Clone quality: bE496K3 on chr=10; Num_of_Contigs=7; )
ITGA8 location ⇒ 10:50953970-50953882   FP085592,CH242-189I8,10:50902290-51017963
(Clone quality: bE189I8 on chr=10; Num_of_Contigs=3; )
ITGA9 ENSSSCG00000011245 13:18673363-18695927   FP102095,CH242-74C5,13:18616749-18696985
(Clone quality: bE74C5 on chr=13; Num_of_Contigs=6; )
ITGA9 location ⇒ 13:18461912-18462050   CU927931,CH242-501I12,13:18461049-18463700
(Clone quality: bE501I12 on chr=13; Num_of_Contigs=23; )
ITGA9 location ⇒ 13:18536279-18536341   FP102095,CH242-74C5,13:18532494-18546942
(Clone quality: bE74C5 on chr=13; Num_of_Contigs=6; )
ITGA9 location ⇒ 13:18611861-18612008   FP102095,CH242-74C5,13:18610108-18616648
(Clone quality: bE74C5 on chr=13; Num_of_Contigs=6; )
ITGA9 location ⇒ 13:18695929-18695836   FP102095,CH242-74C5,13:18616749-18696985
(Clone quality: bE74C5 on chr=13; Num_of_Contigs=6; )
ITGAD location ⇒ 3:35364-35477   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
ITGAD location ⇒ 3:35481-35364   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
ITGAD location ⇒ 3:69004-68931   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
ITGAD location ⇒ 3:78476-78383   FP102618,CH242-1B21,3:75830-115065
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
ITGAE ENSSSCG00000017869 12:47092987-47136476    
ITGAE location ⇒ 12:47218422-47218769   FP236385,CH242-124I22,12:47200845-47228236
(Clone quality: bE124I22 on chr=12; Num_of_Contigs=11; )
ITGAE location ⇒ 12:47219979-47220091   FP236385,CH242-124I22,12:47200845-47228236
(Clone quality: bE124I22 on chr=12; Num_of_Contigs=11; )
ITGAE location ⇒ 12:47225951-47226048   FP236385,CH242-124I22,12:47200845-47228236
(Clone quality: bE124I22 on chr=12; Num_of_Contigs=11; )
ITGAL ENSSSCG00000007797 3:16488603-16527995    
ITGAL location ⇒ 3:16506830-16507030   CU928725,CH242-25P12,3:16502201-16531932
(Clone quality: bE25P12 on chr=3; Num_of_Contigs=8; )
ITGAL location ⇒ 3:16509207-16509370   CU928725,CH242-25P12,3:16502201-16531932
(Clone quality: bE25P12 on chr=3; Num_of_Contigs=8; )
ITGAL location ⇒ 3:16509460-16509616   CU928725,CH242-25P12,3:16502201-16531932
(Clone quality: bE25P12 on chr=3; Num_of_Contigs=8; )
ITGAL location ⇒ 3:16527197-16527896   CU928725,CH242-25P12,3:16502201-16531932
(Clone quality: bE25P12 on chr=3; Num_of_Contigs=8; )
ITGAM location ⇒ 3:15643103-15642876   CU915579,CH242-114I19,3:15639678-15644087
(Clone quality: bE114I19 on chr=3; Num_of_Contigs=28; )
ITGAM location ⇒ 3:15643690-15643575   CU915579,CH242-114I19,3:15639678-15644087
(Clone quality: bE114I19 on chr=3; Num_of_Contigs=28; )
ITGAM location ⇒ 3:15724896-15725011   CU464163,CH242-418M3,3:15708641-15740355
(Clone quality: bE418M3 on chr=3; Num_of_Contigs=3; )
ITGAM location ⇒ 3:15725483-15725710   CU464163,CH242-418M3,3:15708641-15740355
(Clone quality: bE418M3 on chr=3; Num_of_Contigs=3; )
ITGAV ENSSSCG00000016028 15:85848327-85873961    
ITGAX location ⇒ 3:15631104-15630836   CU915579,CH242-114I19,3:15624954-15631104
(Clone quality: bE114I19 on chr=3; Num_of_Contigs=28; )
ITGB1 ENSSSCG00000011101 10:53172192-53224433   CU570933,CH242-23K17,10:53090393-53282217
(Clone quality: bE23K17 on chr=10; Num_of_Contigs=1; )
ITGB1 location ⇒ 10:53173436-53172195   CU570933,CH242-23K17,10:53090393-53282217
(Clone quality: bE23K17 on chr=10; Num_of_Contigs=1; )
ITGB1 location ⇒ 10:53173436-53172195   CU570933,CH242-23K17,10:53090393-53282217
(Clone quality: bE23K17 on chr=10; Num_of_Contigs=1; )
ITGB1 location ⇒ 10:53191576-53191337   CU570933,CH242-23K17,10:53090393-53282217
(Clone quality: bE23K17 on chr=10; Num_of_Contigs=1; )
ITGB1 location ⇒ 10:53191576-53191337   CU570933,CH242-23K17,10:53090393-53282217
(Clone quality: bE23K17 on chr=10; Num_of_Contigs=1; )
ITGB1BP1 location ⇒ 12:496889-496805   CU655877,CH242-167I20,12:447494-500329
(Clone quality: bE167I20 on chr=12; Num_of_Contigs=15; )
ITGB1BP1 location ⇒ 12:615798-615882 FP236794,CH242-280M17,12:612359-620831
(Clone quality: bE280M17 on chr=12; Num_of_Contigs=6; ) 		 
ITGB1BP1 location ⇒ 12:66006-66071 FP085448,CH242-272C22,12:58856-90407
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
ITGB1BP1 location ⇒ 12:728397-728462   CU993801,CH242-26A11,12:713221-732220
(Clone quality: bE26A11 on chr=12; Num_of_Contigs=7; )
ITGB3 ENSSSCG00000017306 12:14440438-14498372    
ITGB3BP location ⇒ 6:105118347-105118650   CU457420,CH242-74K8,6:105083229-105131812
(Clone quality: bE74K8 on chr=6; Num_of_Contigs=4; )
ITGB4 ENSSSCG00000017204 12:4001967-4036159    
ITGB4 location ⇒ 12:4016349-4016169 CU928968,CH242-19M24,12:3978819-4017836
(Clone quality: bE19M24 on chr=12; Num_of_Contigs=4; ) 		 
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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