A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 8701 - 8800:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
PDGFRA ENSSSCG00000008841 8:35262065-35303473    
PDGFRB ENSSSCG00000014442 2:136580731-136750284    
PDGFRL ENSSSCG00000006988 17:5066629-5186685    
PDHX   ENSSSCG00000013298 2:24440038-24519462    
PDIA2   ENSSSCG00000007983 3:35373368-35374861   FP102907,CH242-215K19,3:35373346-35375394
(Clone quality: bE215K19 on chr=3; Num_of_Contigs=7; )
PDIA3 ENSSSCG00000004700 1:133861462-133890030    
PDIA4   ENSSSCG00000015453 9:101857057-101875916    
PDIA5   ENSSSCG00000011870 13:103339909-103357650    
PDIA6   ENSSSCG00000008633 3:116578644-116601790    
PDILT   ENSSSCG00000007860 3:23046506-23070700    
PDK1 ENSSSCG00000008060 3:37050515-37069536    
PDK1 ENSSSCG00000015957 15:73568651-73576378    
PDK3   ENSSSCG00000012181 X:19401655-19471675   CU207272,CH242-227G20,X:19315864-19481708
(Clone quality: bE227G20 on chr=X; Num_of_Contigs=2; )
PDK4 ENSSSCG00000015334 9:70465829-70477355   CU633220,CH242-147O16,9:70459550-70626938
(Clone quality: bE147O16 on chr=9; Num_of_Contigs=1; )
PDL1 ENSSSCG00000005211 1:226573119-226592640   CU457399,CH242-185B23,1:226537240-226608332
(Clone quality: bE185B23 on chr=1; Num_of_Contigs=9; )
PDLIM1   ENSSSCG00000010493 14:111799609-111828760    
PDLIM2   ENSSSCG00000009625 14:6782366-6841003    
PDLIM3   ENSSSCG00000015796 15:43764259-43794626    
PDLIM4   ENSSSCG00000014274 2:122341491-122355933 CU372899,CH242-156J20,2:122331474-122542304
(Clone quality: bE156J20 on chr=2; Num_of_Contigs=2; ) 		 
PDLIM5   ENSSSCG00000009192 8:107127204-107340415    
PDP1   ENSSSCG00000006107 4:43377017-43378630 CU179672,CH242-371G3,4:43234569-43424391
(Clone quality: bE371G3 on chr=4; Num_of_Contigs=2; ) 		 
PDPK1 ENSSSCG00000008060 3:37050515-37069536    
PDPN   ENSSSCG00000003451 6:50299906-50308519   FP236409,CH242-139N22,6:50299882-50316412
(Clone quality: bE139N22 on chr=6; Num_of_Contigs=12; )
PDRG1   ENSSSCG00000007237 17:37654582-37660722   CU694986,CH242-170L12,17:37609131-37681341
(Clone quality: bE170L12 on chr=17; Num_of_Contigs=5; )
PDS5B   ENSSSCG00000009345 11:8582224-8907912    
PDSS1   ENSSSCG00000011061 10:46835913-46886624    
PDYN ENSSSCG00000007180 17:35038893-35055061   CU076083,CH242-165N9,17:35002939-35058589
(Clone quality: bE165N9 on chr=17; Num_of_Contigs=11; )
PDZD11   ENSSSCG00000012378 X:54910416-54913557 CU463005,CH242-411O22,X:54745943-54944013
(Clone quality: bE411O22 on chr=X; Num_of_Contigs=1; ) 		 
PDZD2 ENSSSCG00000016810 16:16012742-16127043   CU570817,CH242-136M15,16:16010401-16139008
(Clone quality: bE136M15 on chr=16; Num_of_Contigs=5; )
PDZD4   ENSSSCG00000012785 X:122657107-122679349   CU915581,CH242-139K22,X:122611684-122679782
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
PDZD7   ENSSSCG00000010559 14:116940201-116944276   CU062549,CH242-28G23,14:116935216-116944308
(Clone quality: bE28G23 on chr=14; Num_of_Contigs=16; )
PDZD8   ENSSSCG00000010669 14:133261862-133414015    
PDZK1   ENSSSCG00000006693 4:103708512-103740596   CU467072,CH242-100P4,4:103582921-103758989
(Clone quality: bE100P4 on chr=4; Num_of_Contigs=2; )
PDZK1IP1   ENSSSCG00000003753 6:88676320-88682035   CU467007,CH242-257B4,6:88671282-88779821
(Clone quality: bE257B4 on chr=6; Num_of_Contigs=2; )
PDZK3 ENSSSCG00000016810 16:16012742-16127043   CU570817,CH242-136M15,16:16010401-16139008
(Clone quality: bE136M15 on chr=16; Num_of_Contigs=5; )
PDZRN3   ENSSSCG00000011521 13:46253260-46271541   CU861920,CH242-148F5,13:46248984-46315362
(Clone quality: bE148F5 on chr=13; Num_of_Contigs=2; )
PDZRN4   ENSSSCG00000000791 5:69164686-69235000    
PEA15 ENSSSCG00000006389 4:93712042-93720847 CU138477,CH242-105O19,4:93708821-93889364
(Clone quality: bE105O19 on chr=4; Num_of_Contigs=5; ) 		 
PEAR1   ENSSSCG00000006463 4:96872398-96886298   CU151867,CH242-283E3,4:96858244-96970867
(Clone quality: bE283E3 on chr=4; Num_of_Contigs=3; )
PEBP1   ENSSSCG00000009851 14:34756187-34762104   CU468330,CH242-221D19,14:34740150-34832482
(Clone quality: bE221D19 on chr=14; Num_of_Contigs=2; )
PEBP4   ENSSSCG00000009631 14:6959726-7056452   CT737218,CH242-19C13,14:6949751-7085055
(Clone quality: bE19C13 on chr=14; Num_of_Contigs=2; )
PEC-60 ENSSSCG00000010997 10:31771645-31849736    
PECI ENSSSCG00000001000 7:2295124-2311768    
PEF1   ENSSSCG00000003602 6:60448720-60466519   CU856262,CH242-97A12,6:60434458-60488383
(Clone quality: bE97A12 on chr=6; Num_of_Contigs=8; )
PEG3 ENSSSCG00000003326 6:42739741-42747604    
PELI1 ENSSSCG00000008366 3:71824109-71828400   CU928831,CH242-4C2,3:71810936-71829919
(Clone quality: bE4C2 on chr=3; Num_of_Contigs=4; )
PELI2   ENSSSCG00000005061 1:193971065-194179354    
PELI3 ENSSSCG00000012944 2:4318313-4327076   CU928034,CH242-426E24,2:4300015-4401092
(Clone quality: bE426E24 on chr=2; Num_of_Contigs=5; )
PELO   ENSSSCG00000016884 16:29156701-29158147   CU463114,CH242-218M18,16:29125333-29233947
(Clone quality: bE218M18 on chr=16; Num_of_Contigs=3; )
PEMT   ENSSSCG00000018055 12:57002205-57008689   CU927962,CH242-273I13,12:57001622-57013525
(Clone quality: bE273I13 on chr=12; Num_of_Contigs=8; )
PENK ENSSSCG00000006243 4:78422054-78426548   CU462960,CH242-392H23,4:78385334-78466679
(Clone quality: bE392H23 on chr=4; Num_of_Contigs=4; )
PEPD   ENSSSCG00000002868 6:28901848-28925843   CU929902,CH242-260F18,6:28809182-28963405
(Clone quality: bE260F18 on chr=6; Num_of_Contigs=2; )
PER1 ENSSSCG00000017502 12:20622594-20637983   CU640399,CH242-251F23,12:20578579-20644206
(Clone quality: bE251F23 on chr=12; Num_of_Contigs=5; )
PER1 ENSSSCG00000017983 12:50588370-50599114   CU914306,CH242-98O15,12:50562814-50608727
(Clone quality: bE98O15 on chr=12; Num_of_Contigs=9; )
PER2   ENSSSCG00000016338 15:130270122-130390174    
PERP ENSSSCG00000004153 1:27726703-27782898    
PES1   ENSSSCG00000010010 14:48285072-48302722   CT827803,CH242-235K4,14:48269978-48304323
(Clone quality: bE235K4 on chr=14; Num_of_Contigs=6; )
PET112L   ENSSSCG00000009015 8:66350577-66405180    
PEX11A   ENSSSCG00000001845 7:60682552-60688846   CT737411,CH242-149F11,7:60651189-60738814
(Clone quality: bE149F11 on chr=7; Num_of_Contigs=3; )
PEX11B   ENSSSCG00000006686 4:103500316-103506534   CU606940,CH242-153I6,4:103497483-103521572
(Clone quality: bE153I6 on chr=4; Num_of_Contigs=12; )
PEX11G   ENSSSCG00000013569 2:50884356-50892023   CU972392,CH242-85F14,2:50883462-50893515
(Clone quality: bE85F14 on chr=2; Num_of_Contigs=25; )
PEX12   ENSSSCG00000017713 12:37736014-37739321   CU927946,CH242-204J8,12:37724810-37778976
(Clone quality: bE204J8 on chr=12; Num_of_Contigs=6; )
PEX13 ENSSSCG00000008387 3:74474538-74505629   CU694829,CH242-168H23,3:74472296-74659530
(Clone quality: bE168H23 on chr=3; Num_of_Contigs=1; )
PEX14   ENSSSCG00000003405 6:47545924-47679556    
PEX16 ENSSSCG00000013267 2:14854637-14860353   FP101987,CH242-521A18,2:14831953-14928280
(Clone quality: bE521A18 on chr=2; Num_of_Contigs=9; )
PEX3 ENSSSCG00000004134 1:22836212-22870511   CU074286,CH242-127C20,1:22835281-23031382
(Clone quality: bE127C20 on chr=1; Num_of_Contigs=1; )
PEX5L   ENSSSCG00000011766 13:89592261-89729263    
PEX6   ENSSSCG00000001653 7:43888180-43899334 CR956379,CH242-196P11,7:43779717-43958428
(No clone quality info on bE196P11) 		 
PEX7   ENSSSCG00000004160 1:28825929-28897262    
PFC ENSSSCG00000012278 X:42114188-42120897   FP015952,CH242-69I19,X:42111786-42120976
(Clone quality: bE69I19 on chr=X; Num_of_Contigs=6; )
PFDN2   ENSSSCG00000006366 4:92835457-92850281   CU463216,CH242-293N2,4:92828593-92858602
(Clone quality: bE293N2 on chr=4; Num_of_Contigs=6; )
PFDN4   ENSSSCG00000007487 17:57386145-57398454 CT009506,CH242-216I3,17:57371608-57477799
(No clone quality info on bE216I3) 		 
PFDN5   ENSSSCG00000000266 5:17053384-17057433    
PFDN6   ENSSSCG00000001505 7:34061041-34062303 CU607018,CH242-138E20,7:33930957-34116846
(Clone quality: bE138E20 on chr=7; Num_of_Contigs=1; ) 		 
PFKFB1   ENSSSCG00000012345 X:47461230-47513903   CU856438,CH242-133L21,X:47452437-47526061
(Clone quality: bE133L21 on chr=X; Num_of_Contigs=8; )
PFKFB2   ENSSSCG00000015660 9:132210258-132230912    
PFKFB4   ENSSSCG00000011353 13:26116917-26158434   CU633242,CH242-208G16,13:26093504-26215489
(Clone quality: bE208G16 on chr=13; Num_of_Contigs=5; )
PFKP   ENSSSCG00000011158 10:63322046-63343648   CU861620,CH242-32E14,10:63315156-63343894
(Clone quality: bE32E14 on chr=10; Num_of_Contigs=11; )
PFN1   ENSSSCG00000017905 12:49158464-49161394   FP015831,CH242-271O18,12:49076321-49169107
(Clone quality: bE271O18 on chr=12; Num_of_Contigs=4; )
PFN3   ENSSSCG00000012370 X:52328293-52328700   CU606949,CH242-297K21,X:52325615-52355571
(Clone quality: bE297K21 on chr=X; Num_of_Contigs=7; )
PFN4   ENSSSCG00000008585 3:106735277-106741285   CU928810,CH242-168M14,3:106726050-106748665
(Clone quality: bE168M14 on chr=3; Num_of_Contigs=3; )
PFTK1   ENSSSCG00000015307 9:66157728-66726769    
PGAM2 ENSSSCG00000016720 18:47352624-47354954   FP236704,CH242-239B21,18:47321386-47379618
(Clone quality: bE239B21 on chr=18; Num_of_Contigs=4; )
PGAP1   ENSSSCG00000016073 15:94463460-94507064    
PGAP2   ENSSSCG00000014793 9:5655371-5655595   CU914666,CH242-341A4,9:5654753-5657324
(Clone quality: bE341A4 on chr=9; Num_of_Contigs=11; )
PGAP3   ENSSSCG00000017502 12:20622594-20637983   CU640399,CH242-251F23,12:20578579-20644206
(Clone quality: bE251F23 on chr=12; Num_of_Contigs=5; )
PGBD1   ENSSSCG00000001207 7:23696613-23713921 CU062578,CH242-485A8,7:23636539-23857828
(Clone quality: bE485A8 on chr=7; Num_of_Contigs=2; ) 		 
PGC   ENSSSCG00000001625 7:42469364-42479970    
PGD ENSSSCG00000003402 6:47483771-47500685   CU929886,CH242-214O13,6:47459319-47565046
(Clone quality: bE214O13 on chr=6; Num_of_Contigs=3; )
PGD ENSSSCG00000005031 1:190214029-190221736   CU571369,CH242-523L1,1:190155010-190315370
(Clone quality: bE523L1 on chr=1; Num_of_Contigs=2; )
PGD ENSSSCG00000009194 8:107524790-107542578   CU951443,CH242-413P10,8:107523499-107544784
(Clone quality: bE413P10 on chr=8; Num_of_Contigs=10; )
PGDS ENSSSCG00000009194 8:107524790-107542578   CU951443,CH242-413P10,8:107523499-107544784
(Clone quality: bE413P10 on chr=8; Num_of_Contigs=10; )
PGF ENSSSCG00000002376 7:106403623-106416598   CT797477,CH242-140C11,7:106390600-106458378
(Clone quality: bE140C11 on chr=7; Num_of_Contigs=2; )
PGGT1B   ENSSSCG00000014215 2:108047669-108226922    
PGK1 ENSSSCG00000012440 X:61625590-61764471    
PGLS   ENSSSCG00000013878 2:61759954-61767912   CU861959,CH242-254K17,2:61757512-61795550
(Clone quality: bE254K17 on chr=2; Num_of_Contigs=9; )
PGLYRP1 ENSSSCG00000003099 6:36237357-36258990    
PGLYRP4 ENSSSCG00000006587 4:100328917-100344000   FP085472,CH242-106M16,4:100327871-100409057
(Clone quality: bE106M16 on chr=4; Num_of_Contigs=3; )
PGM1 ENSSSCG00000003812 6:104917547-104979812   CU929719,CH242-211O22,6:104855552-105005170
(Clone quality: bE211O22 on chr=6; Num_of_Contigs=2; )
PGM2   ENSSSCG00000008773 8:24716205-24750431   FP016170,CH242-4M13,8:24709586-24766045
(Clone quality: bE4M13 on chr=8; Num_of_Contigs=8; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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