A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 5601 - 5700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
HOXA3 ENSSSCG00000016705 18:44264398-44267091   CU570959,CH242-5D15,18:44261153-44388224
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA4 ENSSSCG00000016704 18:44244938-44246486   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA5 ENSSSCG00000016703 18:44231847-44233815   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA6   ENSSSCG00000016702 18:44227757-44229811   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA7   ENSSSCG00000016701 18:44218811-44220665   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA9 ENSSSCG00000016700 18:44209962-44212217   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXB1   ENSSSCG00000017532 12:22340487-22341912    
HOXB13   ENSSSCG00000017541 12:22502214-22504163   CU856160,CH242-281F13,12:22486827-22540378
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB2   ENSSSCG00000017533 12:22352842-22354718   CU856160,CH242-281F13,12:22349854-22360922
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB3 ENSSSCG00000017534 12:22360263-22362548    
HOXB4 ENSSSCG00000017535 12:22386313-22387898   CU856160,CH242-281F13,12:22361023-22389804
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB5   ENSSSCG00000017540 12:22473565-22475071   CU856160,CH242-281F13,12:22470499-22486726
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB6 ENSSSCG00000017539 12:22469246-22470904    
HOXB7 ENSSSCG00000017538 12:22456713-22460172   CU856160,CH242-281F13,12:22389905-22470398
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB8   ENSSSCG00000017537 12:22452717-22454480   CU856160,CH242-281F13,12:22389905-22470398
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB9   ENSSSCG00000017536 12:22441194-22444602   CU856160,CH242-281F13,12:22389905-22470398
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXC12   ENSSSCG00000000281 5:17543863-17545482   CU861633,CH242-441M17,5:17539591-17546659
(Clone quality: bE441M17 on chr=5; Num_of_Contigs=11; )
HOXC4 ENSSSCG00000000285 5:17912668-17913955   CU633419,CH242-45O15,5:17888388-17919531
(Clone quality: bE45O15 on chr=5; Num_of_Contigs=9; )
HOXC5   ENSSSCG00000000286 5:17932916-17934404   CU633419,CH242-45O15,5:17919632-17935223
(Clone quality: bE45O15 on chr=5; Num_of_Contigs=9; )
HOXD1   ENSSSCG00000015986 15:77097042-77098346   CU570829,CH242-243K13,15:77040738-77185013
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
HOXD10   ENSSSCG00000015981 15:77026997-77029400   CU570829,CH242-243K13,15:77017989-77040637
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
HOXD11   ENSSSCG00000015978 15:76952831-77019544    
HOXD12   ENSSSCG00000015980 15:77010069-77011031   CU570829,CH242-243K13,15:76998439-77017888
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
HOXD13   ENSSSCG00000015979 15:77003158-77004980   CU570829,CH242-243K13,15:76998439-77017888
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
HOXD3 ENSSSCG00000015985 15:77078592-77081738   CU570829,CH242-243K13,15:77040738-77185013
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
HOXD4 ENSSSCG00000015984 15:77061919-77063519   CU570829,CH242-243K13,15:77040738-77185013
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
HOXD8   ENSSSCG00000015983 15:77040579-77042083    
HOXD9   ENSSSCG00000015982 15:77033062-77034836   CU570829,CH242-243K13,15:77017989-77040637
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
HP ENSSSCG00000002753 6:12128324-12139753    
HP ENSSSCG00000003894 6:117760201-117779328   FP102856,CH242-411M18,6:117731449-117792877
(Clone quality: bE411M18 on chr=6; Num_of_Contigs=16; )
HP ENSSSCG00000006970 17:732877-933006    
HP ENSSSCG00000006990 17:5493095-5508600    
HP1BP3   ENSSSCG00000003511 6:54296420-54337582    
HPCAL4   ENSSSCG00000003663 6:65582550-65591840 CR956427,CH242-51O7,6:65474974-65651225
(No clone quality info on bE51O7) 		 
HPD   ENSSSCG00000009805 14:30899552-30911597   CT737291,CH242-160P22,14:30791235-30951915
(Clone quality: bE160P22 on chr=14; Num_of_Contigs=1; )
HPDL   ENSSSCG00000003920 6:118938286-118939401   CU657926,CH242-123A1,6:118924192-118957983
(Clone quality: bE123A1 on chr=6; Num_of_Contigs=4; )
HPGD   ENSSSCG00000009699 14:15243339-15296498    
HPRT1 ENSSSCG00000007571 3:1855464-1869309   FP102725,CH242-525I24,3:1850706-1874345
(Clone quality: bE525I24 on chr=3; Note=un_improved;)
HPRT1 ENSSSCG00000012683 X:108419935-108456751    
HPS3   ENSSSCG00000011699 13:72674278-72708887    
HPS4   ENSSSCG00000009960 14:44792276-44814270   CT841533,CH242-245B12,14:44759242-44823985
(Clone quality: bE245B12 on chr=14; Num_of_Contigs=7; )
HPS5   ENSSSCG00000013368 2:38143860-38182501    
HPS6   ENSSSCG00000010573 14:118061589-118064143   CT737175,CH242-202A24,14:118054044-118086308
(Clone quality: bE202A24 on chr=14; Num_of_Contigs=4; )
HPSE ENSSSCG00000009237 8:116198637-116235950    
HPSE2   ENSSSCG00000010535 14:114465553-114709700    
HPX ENSSSCG00000010733 14:140668467-140671021   CU468348,CH242-366L11,14:140645129-140680074
(Clone quality: bE366L11 on chr=14; Num_of_Contigs=5; )
HPX ENSSSCG00000014626 9:2597412-2606196   CU972372,CH242-47M8,9:2582658-2612390
(Clone quality: bE47M8 on chr=9; Num_of_Contigs=7; )
HR   ENSSSCG00000009616 14:6342615-6357880    
HRAS ENSSSCG00000011820 13:98453045-98474220   CU915306,CH242-141G19,13:98394942-98496956
(Clone quality: bE141G19 on chr=13; Num_of_Contigs=5; )
HRAS ENSSSCG00000013055 2:6945295-6973514    
HRASLS   ENSSSCG00000011820 13:98453045-98474220   CU915306,CH242-141G19,13:98394942-98496956
(Clone quality: bE141G19 on chr=13; Num_of_Contigs=5; )
HRC   ENSSSCG00000003156 6:37830246-37833621   FP102974,CH242-517N5,6:37829677-37837164
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
HRG ENSSSCG00000011801 13:94102798-94113808   CU633961,CH242-82L2,13:94043545-94145850
(Clone quality: bE82L2 on chr=13; Num_of_Contigs=4; )
HRG ENSSSCG00000015839 15:49861665-49912799    
HRH1 ENSSSCG00000011576 13:56137438-56138895   CU915532,CH242-98O11,13:56132338-56139158
(Clone quality: bE98O11 on chr=13; Num_of_Contigs=3; )
HRH1 ENSSSCG00000017378 12:17447100-17477589    
HRH2 ENSSSCG00000008756 8:15186349-15244726    
HRH4 ENSSSCG00000003714 6:74794115-74794684    
HRK ENSSSCG00000009861 14:35877326-35877598   CU424482,CH242-136B9,14:35742588-35915478
(Clone quality: bE136B9 on chr=14; Num_of_Contigs=3; )
HRNR   ENSSSCG00000006611 4:101111450-101113594   CU469439,CH242-256E21,4:101110023-101141786
(Clone quality: bE256E21 on chr=4; Num_of_Contigs=4; )
HRSP12 ENSSSCG00000006079 4:38860755-38870321   CU234130,CH242-486G18,4:38849917-38907420
(Clone quality: bE486G18 on chr=4; Num_of_Contigs=7; )
HRSP12 ENSSSCG00000006079 4:38860755-38870321   CU234130,CH242-486G18,4:38849917-38907420
(Clone quality: bE486G18 on chr=4; Num_of_Contigs=7; )
HS1BP3   ENSSSCG00000008597 3:109351071-109358373   CU928464,CH242-36I6,3:109335300-109368296
(Clone quality: bE36I6 on chr=3; Num_of_Contigs=5; )
HS2ST1   ENSSSCG00000006929 4:134105340-134167772   CU462959,CH242-390P3,4:134045312-134215123
(Clone quality: bE390P3 on chr=4; Num_of_Contigs=1; )
HS3ST2   ENSSSCG00000007837 3:21201185-21328190    
HS3ST4   ENSSSCG00000007822 3:19059028-19059762 CU442713,CH242-405H5,3:18960006-19139490
(Clone quality: bE405H5 on chr=3; Num_of_Contigs=11; ) 		 
HS3ST5   ENSSSCG00000004433 1:83693358-83698262   CU041333,CH242-408N4,1:83637312-83721140
(Clone quality: bE408N4 on chr=1; Num_of_Contigs=4; )
HS6ST1   ENSSSCG00000015856 15:55169666-55208658   CU570814,CH242-12B17,15:55166627-55223895
(Clone quality: bE12B17 on chr=15; Num_of_Contigs=10; )
HS6ST2   ENSSSCG00000012677 X:106685807-106813960    
HS6ST3   ENSSSCG00000009504 11:67258242-67258955   FP101899,CH242-407J8,11:67213638-67274562
(Clone quality: bE407J8 on chr=11; Num_of_Contigs=1; )
HSBP1L1   ENSSSCG00000005778 1:291015914-291027823   CU041273,CH242-39O17,1:290960996-291029484
(Clone quality: bE39O17 on chr=1; Num_of_Contigs=4; )
HSBP1P2   ENSSSCG00000000460 5:27818103-27818333   CU639402,CH242-223L20,5:27814497-27859053
(Clone quality: bE223L20 on chr=5; Num_of_Contigs=7; )
HSD11B1   ENSSSCG00000015616 9:125633551-125666772    
HSD11B2   ENSSSCG00000002777 6:13124823-13130473   CU929737,CH242-250E5,6:13062455-13202086
(Clone quality: bE250E5 on chr=6; Num_of_Contigs=3; )
HSD17B10   ENSSSCG00000012327 X:45635692-45638035   CU695116,CH242-358M12,X:45633256-45706192
(Clone quality: bE358M12 on chr=X; Num_of_Contigs=4; )
HSD17B13   ENSSSCG00000009225 8:113121323-113144966   CU655889,CH242-121B11,8:113119797-113145222
(Clone quality: bE121B11 on chr=8; Num_of_Contigs=11; )
HSD17B14   ENSSSCG00000003138 6:37567155-37586075   CU929759,CH242-294C24,6:37551354-37595202
(Clone quality: bE294C24 on chr=6; Num_of_Contigs=3; )
HSD17B2   ENSSSCG00000002686 6:4514200-4578665    
HSD17B3   ENSSSCG00000010937 10:25269584-25313464    
HSD17B8 ENSSSCG00000001476 7:29623336-29625502 CT737383,CH242-215D15,7:29573904-29764538
(Clone quality: bE215D15 on chr=7; Num_of_Contigs=3; ) 		 
HSD3B1 ENSSSCG00000006719 4:105760992-105769608 CR938722,CH242-150C11,4:105730208-105905927
(No clone quality info on bE150C11) 		 
HSDL1   ENSSSCG00000002681 6:3062285-3081722   FP085590,CH242-130L20,6:2950464-3147598
(Clone quality: bE130L20 on chr=6; Num_of_Contigs=2; )
HSDL2   ENSSSCG00000005467 1:265972315-266195114    
HSF1 ENSSSCG00000005917 4:656175-678778    
HSF2 ENSSSCG00000004239 1:41834091-41856606    
HSF4 ENSSSCG00000002792 6:13393992-13399062   CU929920,CH242-351A16,6:13384865-13402282
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
HSF5   ENSSSCG00000017641 12:32718628-32763578   CU681830,CH242-364G8,12:32658530-32786323
(Clone quality: bE364G8 on chr=12; Num_of_Contigs=5; )
HSH2D ENSSSCG00000013853 2:60705770-60712295   CU856246,CH242-281F10,2:60704060-60719427
(Clone quality: bE281F10 on chr=2; Num_of_Contigs=6; )
HSP47 ENSSSCG00000014859 9:9465586-9469980   CU467786,CH242-510E3,9:9464831-9473065
(Clone quality: bE510E3 on chr=9; Num_of_Contigs=17; )
HSP90AB1 ENSSSCG00000001701 7:45765320-45771912 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
HSP90AB4P   ENSSSCG00000014096 2:74976669-74977722   CU463974,CH242-59E15,2:74960997-74984134
(Clone quality: bE59E15 on chr=2; Num_of_Contigs=11; )
HSP90B1 ENSSSCG00000000849 5:75619944-75627941   CU457468,CH242-236A7,5:75618918-75633153
(Clone quality: bE236A7 on chr=5; Num_of_Contigs=7; )
HSPA12A   ENSSSCG00000010662 14:132849615-132876621   CT943652,CH242-275L8,14:132846566-132896368
(Clone quality: bE275L8 on chr=14; Num_of_Contigs=2; )
HSPA12B   ENSSSCG00000007147 17:33555019-33569284   FP236531,CH242-39P18,17:33541632-33571733
(Clone quality: bE39P18 on chr=17; Num_of_Contigs=7; )
HSPA13   ENSSSCG00000012007 13:129059143-129068166    
HSPA14   ENSSSCG00000011051 10:44696404-44723821    
HSPA2 ENSSSCG00000002274 7:97087942-97090450 CT842159,CH242-270B4,7:97057191-97273886
(Clone quality: bE270B4 on chr=7; Num_of_Contigs=6; ) 		 
HSPA4 ENSSSCG00000014292 2:123256296-123299999    
HSPA4L   ENSSSCG00000009077 8:83649963-83701365    
HSPA5 ENSSSCG00000005601 1:280786767-280791205   CU041411,CH242-95A24,1:280776624-280791695
(Clone quality: bE95A24 on chr=1; Num_of_Contigs=8; )
Go to records:
1-100

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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