A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 24301 - 24400:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
CYP2G1P   ENSSSCG00000002992 6:33596132-33608954   CU928654,CH242-130A3,6:33589010-33635086
(Clone quality: bE130A3 on chr=6; Num_of_Contigs=6; )
DHSD_PIG   ENSSSCG00000015034 9:38652878-38665903   CU655934,CH242-367F19,9:38605255-38672831
(Clone quality: bE367F19 on chr=9; Num_of_Contigs=8; )
DMRT1_PIG   ENSSSCG00000005236 1:231177852-231182808    
DPY19L2   ENSSSCG00000016663 18:37858693-37928981    
DYR_PIG   ENSSSCG00000014125 2:78544871-78569098    
EF1G_PIG   ENSSSCG00000013064 2:7513823-7524030   FP102338,CH242-94E13,2:7490082-7534927
(Clone quality: bE94E13 on chr=2; Num_of_Contigs=10; )
EIF2C2   ENSSSCG00000005935 4:1717726-1759572    
ELA1_PIG   ENSSSCG00000000222 5:15234969-15294617    
ELA2A_PIG   ENSSSCG00000003459 6:51213481-51266606    
ELA2A_PIG   ENSSSCG00000003459 6:51213481-51266606    
EST1_PIG   ENSSSCG00000002825 6:20634236-20659554    
EST1_PIG   ENSSSCG00000002825 6:20634236-20659554    
F16P1_PIG   ENSSSCG00000010944 10:26696160-26859821    
FABPH_PIG   ENSSSCG00000003546 6:56837152-56837553   FP102651,CH242-25G13,6:56816566-56894671
(Clone quality: bE25G13 on chr=6; Num_of_Contigs=5; )
FAM13A   ENSSSCG00000009207 8:111994156-112016343    
FETUA_PIG   ENSSSCG00000011799 13:94029112-94036187    
FGD6   ENSSSCG00000000903 5:83231216-83326452    
FHOD3   ENSSSCG00000003745 6:83721291-83759683   CU928418,CH242-185D1,6:83664063-83829705
(Clone quality: bE185D1 on chr=6; Num_of_Contigs=3; )
FRIL_PIG   ENSSSCG00000003153 6:37763537-37765040    
GCDH_PIG   ENSSSCG00000013729 2:55998084-56002447   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
GDPD5   ENSSSCG00000014853 9:9289691-9299814    
GGLO_PIG   ENSSSCG00000009667 14:11418875-11451350   CU633626,CH242-119C13,14:11386850-11482027
(Clone quality: bE119C13 on chr=14; Num_of_Contigs=3; )
GGTA1_PIG   ENSSSCG00000005518 1:275105252-275180833    
GLCM_PIG   ENSSSCG00000006522 4:98663062-98685499   CU179666,CH242-242M24,4:98662559-98685594
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
GLCM_PIG   ENSSSCG00000006522 4:98663062-98685499   CU179666,CH242-242M24,4:98662559-98685594
(Clone quality: bE242M24 on chr=4; Num_of_Contigs=7; )
GLTP_PIG   ENSSSCG00000009928 14:41253890-41277076   CU640887,CH242-377K8,14:41152094-41308016
(Clone quality: bE377K8 on chr=14; Num_of_Contigs=2; )
GPR137C   ENSSSCG00000005034 1:190540173-190726039    
GPX5_PIG   ENSSSCG00000001213 7:23848030-23858608    
GPX5_PIG   ENSSSCG00000001214 7:23992282-24003565 CU313307,CH242-264E8,7:23910600-24118818
(Clone quality: bE264E8 on chr=7; Num_of_Contigs=4; ) 		 
GTF2H5   ENSSSCG00000016126 15:102127271-102127480   CU468044,CH242-112E22,15:102088282-102133910
(Clone quality: bE112E22 on chr=15; Num_of_Contigs=9; )
H1T_PIG   ENSSSCG00000001144 7:22188480-22189118   CU466447,CH242-214G3,7:22164394-22211337
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
H1T_PIG   ENSSSCG00000001122 7:21963940-21964578   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
H4_PIG   ENSSSCG00000001124 7:21995500-21995808   CU466447,CH242-214G3,7:21994532-22003775
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
H4_PIG   ENSSSCG00000001143 7:22186228-22186539   CU466447,CH242-214G3,7:22164394-22211337
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
H4_PIG   ENSSSCG00000006675 4:103217879-103218187   CU462833,CH242-167L20,4:103208937-103337851
(Clone quality: bE167L20 on chr=4; Num_of_Contigs=2; )
H4_PIG   ENSSSCG00000001113 7:21909496-21909807   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
H4_PIG   ENSSSCG00000001172 7:22878004-22878315   CU041316,CH242-47D17,7:22710800-22886089
(Clone quality: bE47D17 on chr=7; Num_of_Contigs=1; )
H4_PIG   ENSSSCG00000001168 7:22866145-22866456   CU041316,CH242-47D17,7:22710800-22886089
(Clone quality: bE47D17 on chr=7; Num_of_Contigs=1; )
H4_PIG   ENSSSCG00000001177 7:22904244-22904555   CU407097,CH242-5B5,7:22899990-22905090
(Clone quality: bE5B5 on chr=7; Num_of_Contigs=4; )
HBA_PIG   ENSSSCG00000007978 3:35253063-35253941   FP102907,CH242-215K19,3:35226737-35270144
(Clone quality: bE215K19 on chr=3; Num_of_Contigs=7; )
HPT_PIG   ENSSSCG00000002749 6:10789560-10794379   CU914723,CH242-491H10,6:10781997-10802656
(Clone quality: bE491H10 on chr=6; Num_of_Contigs=16; )
IDHP_PIG   ENSSSCG00000001854 7:61107888-61320540    
IDHP_PIG   ENSSSCG00000001854 7:61107888-61320540    
ITB6_PIG   ENSSSCG00000015886 15:62313529-62376079    
KGUA_PIG   ENSSSCG00000013990 2:66544256-66554037 FP085478,CH242-132B19,2:66476472-66645587
(Clone quality: bE132B19 on chr=2; Num_of_Contigs=3; ) 		 
KIAA1211   ENSSSCG00000008903 8:47256223-47257803   CU856166,CH242-62C23,8:47256220-47262753
(Clone quality: bE62C23 on chr=8; Num_of_Contigs=20; )
KIAA1875   ENSSSCG00000005916 4:595866-683192    
LAC_PIG   ENSSSCG00000010041 14:49745853-49932451    
LAC_PIG   ENSSSCG00000010041 14:49745853-49932451    
LATS1   ENSSSCG00000004106 1:17257694-17290467    
LDHB_PIG   ENSSSCG00000000576 5:49822469-49839949    
LDHB_PIG   ENSSSCG00000000576 5:49822469-49839949    
LDHC_PIG   ENSSSCG00000013363 2:37842634-37893500    
LIN37   ENSSSCG00000002898 6:30171169-30177062   FP243365,CH242-219O7,6:30147881-30183141
(Clone quality: bE219O7 on chr=6; Num_of_Contigs=6; )
LIPP_PIG   ENSSSCG00000010658 14:132562702-132606475    
LIPP_PIG   ENSSSCG00000010658 14:132562702-132606475    
LITH_PIG   ENSSSCG00000008256 3:59425104-59427818   CU694523,CH242-64C23,3:59423549-59428298
(Clone quality: bE64C23 on chr=3; Num_of_Contigs=16; )
LRP5   ENSSSCG00000012885 2:2885875-3062096    
LSHB_PIG   ENSSSCG00000003151 6:37754230-37755346   FP102974,CH242-517N5,6:37749269-37760175
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
LSHB_PIG   ENSSSCG00000003151 6:37754230-37755346   FP102974,CH242-517N5,6:37749269-37760175
(Clone quality: bE517N5 on chr=6; Num_of_Contigs=15; )
LYOX_PIG   ENSSSCG00000014232 2:113568780-113580690   CU928298,CH242-225M8,2:113561484-113585663
(Clone quality: bE225M8 on chr=2; Num_of_Contigs=4; )
MAEL_PIG   ENSSSCG00000006315 4:87330578-87333480   CU570903,CH242-111C5,4:87330380-87334824
(Clone quality: bE111C5 on chr=4; Num_of_Contigs=18; )
MAK16   ENSSSCG00000015832 15:49318428-49327766   FP102412,CH242-94A16,15:49300812-49335243
(Clone quality: bE94A16 on chr=15; Num_of_Contigs=2; )
MARCH1   ENSSSCG00000008891 8:45276724-45313561    
MCR_PIG   ENSSSCG00000009027 8:69534309-69570851    
MEOX1   ENSSSCG00000017376 12:17343490-17344088   CU928405,CH242-149G4,12:17278473-17345758
(Clone quality: bE149G4 on chr=12; Num_of_Contigs=4; )
METT10D   ENSSSCG00000017833 12:45972181-45992324    
MRGPRX2   ENSSSCG00000013356 2:37514811-37515800   CU929490,CH242-88D19,2:37512413-37521556
(Clone quality: bE88D19 on chr=2; Num_of_Contigs=15; )
MUC8   ENSSSCG00000008658 3:121419246-121565313    
MUCAP_PIG   ENSSSCG00000000787 5:68120974-68149868    
MUTED_PIG   ENSSSCG00000001029 7:5388312-5425837    
MYH14   ENSSSCG00000003208 6:38796326-38808392    
MYL9_PIG   ENSSSCG00000007316 17:41853053-41860136   CU856011,CH242-230F9,17:41851095-41863720
(Clone quality: bE230F9 on chr=17; Num_of_Contigs=20; )
MYL9_PIG   ENSSSCG00000007318 17:42060743-42067825   CU606965,CH242-38P3,17:42054479-42068271
(Clone quality: bE38P3 on chr=17; Num_of_Contigs=10; )
MYO9B   ENSSSCG00000013876 2:61701778-61716228   CU914416,CH242-266I16,2:61677550-61716362
(Clone quality: bE266I16 on chr=2; Num_of_Contigs=8; )
NACA   ENSSSCG00000000407 5:21125860-21134630    
NEDD4L   ENSSSCG00000004920 1:169377480-169418181    
NEUL_PIG   ENSSSCG00000016951 16:41595934-41715233    
NNMT_PIG   ENSSSCG00000015054 9:40582495-40584789   CU469234,CH242-491D8,9:40582081-40586002
(Clone quality: bE491D8 on chr=9; Num_of_Contigs=26; )
NP_001033055.1   ENSSSCG00000001544 7:35925185-35938804   CU467978,CH242-397F5,7:35872400-35952461
(Clone quality: bE397F5 on chr=7; Num_of_Contigs=4; )
NP_001033055.1   ENSSSCG00000001544 7:35925185-35938804   CU467978,CH242-397F5,7:35872400-35952461
(Clone quality: bE397F5 on chr=7; Num_of_Contigs=4; )
NP_001033720.1   ENSSSCG00000005688 1:284800275-284812975   CU570730,CH242-246K4,1:284778519-284816003
(Clone quality: bE246K4 on chr=1; Num_of_Contigs=3; )
NP_001070687.1   ENSSSCG00000004317 1:60111548-60135644   CU075926,CH242-86H13,1:59921397-60144581
(Clone quality: bE86H13 on chr=1; Num_of_Contigs=1; )
NP_001090953.1   ENSSSCG00000004480 1:95630299-95786257    
NP_001090953.1   ENSSSCG00000004483 1:95811844-95818519   CU041245,CH242-386L24,1:95792114-95906480
(Clone quality: bE386L24 on chr=1; Num_of_Contigs=3; )
NP_001092057.1   ENSSSCG00000010534 14:114431683-114455959   CT827798,CH242-157A12,14:114417850-114551680
(Clone quality: bE157A12 on chr=14; Num_of_Contigs=2; )
NP_001094497.1   ENSSSCG00000001718 7:48483301-48580425    
NP_001096681.1   ENSSSCG00000010362 14:91695965-91700812   CU041359,CH242-97P15,14:91656528-91726690
(Clone quality: bE97P15 on chr=14; Num_of_Contigs=11; )
NP_001096681.1   ENSSSCG00000010365 14:91810716-91815594   CU633355,CH242-179A13,14:91776156-91937562
(Clone quality: bE179A13 on chr=14; Num_of_Contigs=3; )
NP_001098768.1   ENSSSCG00000005692 1:284943472-284953474   CU459043,CH242-114M9,1:284900822-284986124
(Clone quality: bE114M9 on chr=1; Num_of_Contigs=4; )
NP_001098768.1   ENSSSCG00000005676 1:284519253-284529241    
NP_001098768.1   ENSSSCG00000005692 1:284943472-284953474   CU459043,CH242-114M9,1:284900822-284986124
(Clone quality: bE114M9 on chr=1; Num_of_Contigs=4; )
NP_001098768.1   ENSSSCG00000005676 1:284519253-284529241    
NP_001107172.1   ENSSSCG00000007498 17:59621962-59623791 CR956640,CH242-155M9,17:59463698-59643740
(No clone quality info on bE155M9) 		 
NP_001116548.1   ENSSSCG00000006754 4:110229095-110252361   CU393558,CH242-266G7,4:110202821-110378185
(Clone quality: bE266G7 on chr=4; Num_of_Contigs=1; )
NP_001116561.1   ENSSSCG00000001427 7:27890046-27905155 CT956038,CH242-183N12,7:27767223-27953076
(Clone quality: bE183N12 on chr=7; Num_of_Contigs=3; ) 		 
NP_001116574.1   ENSSSCG00000006560 4:99757482-99763246   CU468620,CH242-99G21,4:99706339-99812454
(Clone quality: bE99G21 on chr=4; Num_of_Contigs=4; )
NP_001116574.1   ENSSSCG00000006566 4:99944902-99950901   CU407290,CH242-513B13,4:99941652-99962687
(Clone quality: bE513B13 on chr=4; Num_of_Contigs=7; )
NP_001116604.1   ENSSSCG00000001241 7:24747464-24752076 CU607067,CH242-469P22,7:24676460-24783185
(Clone quality: bE469P22 on chr=7; Num_of_Contigs=2; ) 		 
NP_001116694.1   ENSSSCG00000000042 5:2981241-2989711 BX296515,PigE-121D21,5:2907737-3087427
(Clone quality: bT121D21 on chr=5; Num_of_Contigs=8; ) 		 
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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