A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 22901 - 23000:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
TLR8 location ⇒ X:8553189-8553362 FP102063,CH242-76E20,X:8545658-8722254
(Clone quality: bE76E20 on chr=X; Num_of_Contigs=2; )
 
TLR8 location ⇒ X:8556063-8556185 FP102063,CH242-76E20,X:8545658-8722254
(Clone quality: bE76E20 on chr=X; Num_of_Contigs=2; )
 
TLR8 location ⇒ X:8726177-8729324 FP085461,CH242-524I24,X:8722255-8912483
(Clone quality: bE524I24 on chr=X; Num_of_Contigs=2; )
 
TLR9 location ⇒ 13:28826746-28824365   CU914695,CH242-195P19,13:28772257-28826761
(Clone quality: bE195P19 on chr=13; Num_of_Contigs=14; )
TLR9 location ⇒ 13:28832867-28832924   CU914695,CH242-195P19,13:28830492-28833577
(Clone quality: bE195P19 on chr=13; Num_of_Contigs=14; )
TLR9 location ⇒ 13:29049281-29052165   CU915558,CH242-407L22,13:29047015-29052186
(Clone quality: bE407L22 on chr=13; Num_of_Contigs=4; )
TLR9 location ⇒ 13:29052287-29052461    
TLX1 location ⇒ 16:49904760-49904672   CU915526,CH242-84K24,16:49903103-49905970
(Clone quality: bE84K24 on chr=16; Num_of_Contigs=2; )
TLX1 location ⇒ 16:49905864-49905632   CU915526,CH242-84K24,16:49903103-49905970
(Clone quality: bE84K24 on chr=16; Num_of_Contigs=2; )
TM4SF2 location ⇒ X:34084345-34084534   FP102385,CH242-81B3,X:34005128-34178208
(Clone quality: bE81B3 on chr=X; Num_of_Contigs=2; )
TM4SF2 location ⇒ X:34093885-34094041   FP102385,CH242-81B3,X:34005128-34178208
(Clone quality: bE81B3 on chr=X; Num_of_Contigs=2; )
TM4SF2 location ⇒ X:34107849-34108810   FP102385,CH242-81B3,X:34005128-34178208
(Clone quality: bE81B3 on chr=X; Num_of_Contigs=2; )
TM4SF2 location ⇒ X:34254563-34254374   CU480860,CH242-49J12,X:34233168-34262767
(Clone quality: bE49J12 on chr=X; Num_of_Contigs=7; )
TMCO1 location ⇒ 4:88414501-88414551   CU468989,CH242-231O3,4:88387394-88421643
(Clone quality: bE231O3 on chr=4; Num_of_Contigs=3; )
TMCO1 location ⇒ 4:88416746-88416814   CU468989,CH242-231O3,4:88387394-88421643
(Clone quality: bE231O3 on chr=4; Num_of_Contigs=3; )
TMCO1 location ⇒ 4:88428061-88428205   CU468388,CH242-187I4,4:88421644-88589691
(Clone quality: bE187I4 on chr=4; Num_of_Contigs=2; )
TMCO1 location ⇒ 4:88447528-88447904   CU468388,CH242-187I4,4:88421644-88589691
(Clone quality: bE187I4 on chr=4; Num_of_Contigs=2; )
TMEM106B location ⇒ 7:98181620-98181718 CT827816,CH242-102G18,7:98049960-98250340
(Clone quality: bE102G18 on chr=7; Num_of_Contigs=1; )
 
TMEM106B location ⇒ 7:98181766-98181824 CT827816,CH242-102G18,7:98049960-98250340
(Clone quality: bE102G18 on chr=7; Num_of_Contigs=1; )
 
TMEM130 location ⇒ 3:4973721-4973657   CU856473,CH242-90I19,3:4972926-4977524
(Clone quality: bE90I19 on chr=3; Num_of_Contigs=6; )
TMEM130 location ⇒ 3:4979859-4979795   CU856473,CH242-90I19,3:4977625-4996063
(Clone quality: bE90I19 on chr=3; Num_of_Contigs=6; )
TMEM130 location ⇒ 3:5097396-5097332   CU915307,CH242-144A12,3:5082703-5108327
(Clone quality: bE144A12 on chr=3; Num_of_Contigs=10; )
TMEM130 location ⇒ 3:5103443-5103379   CU915307,CH242-144A12,3:5082703-5108327
(Clone quality: bE144A12 on chr=3; Num_of_Contigs=10; )
TMEM142A location ⇒ 14:31066736-31066126   CU467994,CH242-404B6,14:31022818-31072924
(Clone quality: bE404B6 on chr=14; Num_of_Contigs=4; )
TMEM142A location ⇒ 14:31081658-31081499   CU693466,CH242-414G9,14:31072925-31112963
(Clone quality: bE414G9 on chr=14; Num_of_Contigs=9; )
TMEM30B location ⇒ 1:199177213-199177089   CU856630,CH242-128J23,1:199117213-199208126
(Clone quality: bE128J23 on chr=1; Num_of_Contigs=6; )
TMEM30B location ⇒ 1:199180335-199179256   CU856630,CH242-128J23,1:199117213-199208126
(Clone quality: bE128J23 on chr=1; Num_of_Contigs=6; )
TMEM8 location ⇒ 3:35440555-35440406   FP103065,CH242-393N23,3:35429454-35444197
(Clone quality: bE393N23 on chr=3; Num_of_Contigs=5; )
TMEM8 location ⇒ 3:35440811-35440630   FP103065,CH242-393N23,3:35429454-35444197
(Clone quality: bE393N23 on chr=3; Num_of_Contigs=5; )
TMEM8 location ⇒ 3:35441750-35441613   FP103065,CH242-393N23,3:35429454-35444197
(Clone quality: bE393N23 on chr=3; Num_of_Contigs=5; )
TMEM8 location ⇒ 3:35442166-35442096   FP103065,CH242-393N23,3:35429454-35444197
(Clone quality: bE393N23 on chr=3; Num_of_Contigs=5; )
TMF1 location ⇒ 13:109444494-109444432   CU633650,CH242-194M8,13:109403457-109451276
(Clone quality: bE194M8 on chr=13; Num_of_Contigs=3; )
TMF1 location ⇒ 13:36383892-36383828   CU861639,CH242-72P13,13:36366932-36384762
(Clone quality: bE72P13 on chr=13; Num_of_Contigs=3; )
TMF1 location ⇒ 13:42262806-42262723   CU464138,CH242-109C12,13:42258764-42281066
(Clone quality: bE109C12 on chr=13; Num_of_Contigs=5; )
TMF1 location ⇒ 13:55531005-55531056   CU655990,CH242-268L7,13:55512556-55562333
(Clone quality: bE268L7 on chr=13; Num_of_Contigs=5; )
TMIGD1 location ⇒ 12:44232257-44232362   CU929650,CH242-46P9,12:44226750-44246270
(Clone quality: bE46P9 on chr=12; Num_of_Contigs=13; )
TMIGD1 location ⇒ 12:44234821-44234936   CU929650,CH242-46P9,12:44226750-44246270
(Clone quality: bE46P9 on chr=12; Num_of_Contigs=13; )
TMIGD1 location ⇒ 12:44356882-44356604   CU929650,CH242-46P9,12:44356572-44372174
(Clone quality: bE46P9 on chr=12; Num_of_Contigs=13; )
TMIGD1 location ⇒ 12:44361298-44361142   CU929650,CH242-46P9,12:44356572-44372174
(Clone quality: bE46P9 on chr=12; Num_of_Contigs=13; )
TMOD3 location ⇒ 1:124729286-124728689   CU855739,CH242-269H22,1:124620385-124732246
(Clone quality: bE269H22 on chr=1; Num_of_Contigs=5; )
TMOD3 location ⇒ 1:124773384-124773183   CU855739,CH242-269H22,1:124759152-124778542
(Clone quality: bE269H22 on chr=1; Num_of_Contigs=5; )
TMOD3 location ⇒ 1:124863004-124862407   FP236432,CH242-502C24,1:124853945-124863837
(No clone quality info on )
TMOD3 location ⇒ 1:124885580-124885411   FP236432,CH242-502C24,1:124885379-124888507
(No clone quality info on )
TMSB4X location ⇒ X:8602746-8602856 FP102063,CH242-76E20,X:8545658-8722254
(Clone quality: bE76E20 on chr=X; Num_of_Contigs=2; )
 
TMSB4X location ⇒ X:8603264-8603658 FP102063,CH242-76E20,X:8545658-8722254
(Clone quality: bE76E20 on chr=X; Num_of_Contigs=2; )
 
TMSB4X location ⇒ X:8766819-8766929 FP085461,CH242-524I24,X:8722255-8912483
(Clone quality: bE524I24 on chr=X; Num_of_Contigs=2; )
 
TMSB4X location ⇒ X:8767337-8767731 FP085461,CH242-524I24,X:8722255-8912483
(Clone quality: bE524I24 on chr=X; Num_of_Contigs=2; )
 
TMTC1 location ⇒ 5:41723853-41723789   CU929384,CH242-123C15,5:41681609-41839585
(Clone quality: bE123C15 on chr=5; Num_of_Contigs=1; )
TMTC1 location ⇒ 5:41793402-41793341   CU929384,CH242-123C15,5:41681609-41839585
(Clone quality: bE123C15 on chr=5; Num_of_Contigs=1; )
TMTC1 location ⇒ 5:42407701-42407765   CU928630,CH242-248B21,5:42377405-42502794
(Clone quality: bE248B21 on chr=5; Num_of_Contigs=2; )
TMTC1 location ⇒ 5:42920575-42920631   CU972367,CH242-508A20,5:42919963-42930645
(Clone quality: bE508A20 on chr=5; Num_of_Contigs=6; )
TNC location ⇒ 1:268415923-268415516   CU466939,CH242-294C3,1:268387611-268443702
(Clone quality: bE294C3 on chr=1; Num_of_Contigs=9; )
TNC location ⇒ 1:268626056-268624645   CU407235,CH242-418C10,1:268622109-268630777
(Clone quality: bE418C10 on chr=1; Num_of_Contigs=13; )
TNC location ⇒ 1:268629531-268628935   CU407235,CH242-418C10,1:268622109-268630777
(Clone quality: bE418C10 on chr=1; Num_of_Contigs=13; )
TNC location ⇒ 1:268713590-268713183   CU407235,CH242-418C10,1:268713041-268717658
(Clone quality: bE418C10 on chr=1; Num_of_Contigs=13; )
TNFAIP2 location ⇒ 7:130753380-130753484   CU467770,CH242-452K19,7:130745546-130757624
(Clone quality: bE452K19 on chr=7; Num_of_Contigs=13; )
TNFAIP3 location ⇒ 1:27897029-27896976   CU914302,CH242-92E17,1:27896090-27899947
(Clone quality: bE92E17 on chr=1; Num_of_Contigs=10; )
TNFAIP3 location ⇒ 1:27900470-27900153   CU914302,CH242-92E17,1:27900048-27902925
(Clone quality: bE92E17 on chr=1; Num_of_Contigs=10; )
TNFAIP3 location ⇒ 1:27901543-27901360   CU914302,CH242-92E17,1:27900048-27902925
(Clone quality: bE92E17 on chr=1; Num_of_Contigs=10; )
TNFAIP3 location ⇒ 1:27932176-27932476   CU914302,CH242-92E17,1:27928632-27934498
(Clone quality: bE92E17 on chr=1; Num_of_Contigs=10; )
TNFAIP6 location ⇒ 15:133961606-133961376   CU856324,CH242-167H23,15:133957988-133963675
(Clone quality: bE167H23 on chr=15; Num_of_Contigs=8; )
TNFAIP6 location ⇒ 15:133961784-133961681   CU856324,CH242-167H23,15:133957988-133963675
(Clone quality: bE167H23 on chr=15; Num_of_Contigs=8; )
TNFAIP6 location ⇒ 15:133962050-133961831   CU856324,CH242-167H23,15:133957988-133963675
(Clone quality: bE167H23 on chr=15; Num_of_Contigs=8; )
TNFAIP6 location ⇒ 15:133969056-133968984   CU856324,CH242-167H23,15:133963776-133969056
(Clone quality: bE167H23 on chr=15; Num_of_Contigs=8; )
TNFAIP8L2 location ⇒ 4:102047821-102047733 CU138569,CH242-265M12,4:101911025-102092543
(Clone quality: bE265M12 on chr=4; Num_of_Contigs=8; )
 
TNFAIP8L2 location ⇒ 4:102048814-102047879 CU138569,CH242-265M12,4:101911025-102092543
(Clone quality: bE265M12 on chr=4; Num_of_Contigs=8; )
 
TNFAIP8L2 location ⇒ 4:102050803-102050749 CU138569,CH242-265M12,4:101911025-102092543
(Clone quality: bE265M12 on chr=4; Num_of_Contigs=8; )
 
TNFRSF10A location ⇒ 1:187872885-187872960   CU633502,CH242-240C20,1:187832890-187878221
(Clone quality: bE240C20 on chr=1; Num_of_Contigs=4; )
TNFRSF10A location ⇒ 1:188087540-188087465   CU606975,CH242-251A8,1:188036812-188088768
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
TNFRSF10A location ⇒ 1:188102022-188101947   CU606975,CH242-251A8,1:188088869-188146416
(Clone quality: bE251A8 on chr=1; Num_of_Contigs=5; )
TNFRSF10A location ⇒ 1:228874403-228874328   CU618324,CH242-276M24,1:228857825-228880847
(Clone quality: bE276M24 on chr=1; Num_of_Contigs=4; )
TNFRSF10B location ⇒ 14:7151484-7151546   CU468373,CH242-89K24,14:7145126-7189106
(Clone quality: bE89K24 on chr=14; Num_of_Contigs=10; )
TNFRSF10B location ⇒ 14:7280291-7280229   CU326374,CH242-10L19,14:7271329-7369891
(Clone quality: bE10L19 on chr=14; Num_of_Contigs=2; )
TNFRSF10B location ⇒ 14:7532751-7532813   CT990613,CH242-283L3,14:7524679-7574795
(Clone quality: bE283L3 on chr=14; Num_of_Contigs=6; )
TNFRSF11A location ⇒ 1:166005839-166005239   CU234199,CH242-216F10,1:165980062-166061275
(Clone quality: bE216F10 on chr=1; Num_of_Contigs=4; )
TNFRSF11B location ⇒ 4:19598429-19597683   CU633166,CH242-127F8,4:19578912-19611312
(Clone quality: bE127F8 on chr=4; Num_of_Contigs=3; )
TNFRSF11B location ⇒ 4:19686408-19687154   CU469008,CH242-30A22,4:19674563-19721713
(Clone quality: bE30A22 on chr=4; Num_of_Contigs=4; )
TNFRSF17 location ⇒ 3:25830-25733   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
TNFRSF17 location ⇒ 3:35364-35473   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
TNFRSF17 location ⇒ 3:6480-6601   FP102618,CH242-1B21,3:1-10372
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
TNFRSF17 location ⇒ 3:6643-6542   FP102618,CH242-1B21,3:1-10372
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
TNFRSF19 location ⇒ 11:1459919-1460101   CU929510,CH242-273A16,11:1455054-1520978
(Clone quality: bE273A16 on chr=11; Num_of_Contigs=4; )
TNFRSF19 location ⇒ 11:1502064-1502186   CU929510,CH242-273A16,11:1455054-1520978
(Clone quality: bE273A16 on chr=11; Num_of_Contigs=4; )
TNFRSF19 location ⇒ 11:1768200-1768078   CU633467,CH242-134D18,11:1741183-1806334
(Clone quality: bE134D18 on chr=11; Num_of_Contigs=6; )
TNFRSF19 location ⇒ 11:1958460-1958642   CU633467,CH242-134D18,11:1947426-1962141
(Clone quality: bE134D18 on chr=11; Num_of_Contigs=6; )
TNFRSF19L location ⇒ 9:7440028-7439822   FP102302,CH242-226L8,9:7438901-7443808
(Clone quality: bE226L8 on chr=9; Num_of_Contigs=9; )
TNFRSF19L location ⇒ 9:7441072-7440906   FP102302,CH242-226L8,9:7438901-7443808
(Clone quality: bE226L8 on chr=9; Num_of_Contigs=9; )
TNFRSF19L location ⇒ 9:7487238-7487408   CU915682,CH242-302I13,9:7484508-7499164
(Clone quality: bE302I13 on chr=9; Num_of_Contigs=7; )
TNFRSF19L location ⇒ 9:7488286-7488492   CU915682,CH242-302I13,9:7484508-7499164
(Clone quality: bE302I13 on chr=9; Num_of_Contigs=7; )
TNFRSF1A location ⇒ 5:60348819-60349135   CU856072,CH242-98O22,5:60346551-60357101
(Clone quality: bE98O22 on chr=5; Num_of_Contigs=6; )
TNFRSF1A location ⇒ 5:60349263-60349780   CU856072,CH242-98O22,5:60346551-60357101
(Clone quality: bE98O22 on chr=5; Num_of_Contigs=6; )
TNFRSF1A location ⇒ 5:60349833-60349884   CU856072,CH242-98O22,5:60346551-60357101
(Clone quality: bE98O22 on chr=5; Num_of_Contigs=6; )
TNFRSF1A location ⇒ 5:60349879-60350211   CU856072,CH242-98O22,5:60346551-60357101
(Clone quality: bE98O22 on chr=5; Num_of_Contigs=6; )
TNFRSF1B location ⇒ 14:141378002-141378221   CU468571,CH242-517H7,14:141369324-141382309
(Clone quality: bE517H7 on chr=14; Num_of_Contigs=17; )
TNFRSF21 location ⇒ 7:49443858-49443638   CU407333,CH242-132D3,7:49432682-49454487
(Clone quality: bE132D3 on chr=7; Num_of_Contigs=9; )
TNFRSF21 location ⇒ 7:49463322-49462824   CU407333,CH242-132D3,7:49454588-49501576
(Clone quality: bE132D3 on chr=7; Num_of_Contigs=9; )
TNFRSF21 location ⇒ 7:49465073-49465007   CU407333,CH242-132D3,7:49454588-49501576
(Clone quality: bE132D3 on chr=7; Num_of_Contigs=9; )
TNFRSF25 location ⇒ 6:45678175-45678914   FP102449,CH242-60I1,6:45665679-45695205
(Clone quality: bE60I1 on chr=6; Num_of_Contigs=6; )
TNFRSF25 location ⇒ 6:45876039-45876778   FP236215,CH242-289B8,6:45871722-45880099
(Clone quality: bE289B8 on chr=6; Num_of_Contigs=13; )
TNFRSF4 location ⇒ 9:108497778-108497429   FP102846,CH242-165D11,9:108457150-108509916
(Clone quality: bE165D11 on chr=9; Num_of_Contigs=5; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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