A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 18901 - 19000:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
LAT location ⇒ 3:16752047-16751939   CU928476,CH242-24P1,3:16739139-16769231
(Clone quality: bE24P1 on chr=3; Num_of_Contigs=5; )
LAT location ⇒ 3:16755860-16755742   CU928476,CH242-24P1,3:16739139-16769231
(Clone quality: bE24P1 on chr=3; Num_of_Contigs=5; )
LAT location ⇒ 3:16879562-16879454   FP236780,CH242-166K15,3:16872934-16887483
(Clone quality: bE166K15 on chr=3; Num_of_Contigs=12; )
LAT location ⇒ 3:16883361-16883243   FP236780,CH242-166K15,3:16872934-16887483
(Clone quality: bE166K15 on chr=3; Num_of_Contigs=12; )
LAT2 location ⇒ 3:16072-15971   FP102618,CH242-1B21,3:10473-20929
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
LAT2 location ⇒ 3:25822-25757   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
LAT2 location ⇒ 3:27719-27622   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
LAT2 location ⇒ 3:41723-41618   FP102618,CH242-1B21,3:21030-75729
(Clone quality: bE1B21 on chr=3; Num_of_Contigs=5; )
LAX1 location ⇒ 9:62231885-62232067   CU655999,CH242-299D21,9:62221412-62245767
(Clone quality: bE299D21 on chr=9; Num_of_Contigs=9; )
LAX1 location ⇒ 9:62232635-62232829   CU655999,CH242-299D21,9:62221412-62245767
(Clone quality: bE299D21 on chr=9; Num_of_Contigs=9; )
LAX1 location ⇒ 9:62237310-62237421   CU655999,CH242-299D21,9:62221412-62245767
(Clone quality: bE299D21 on chr=9; Num_of_Contigs=9; )
LAX1 location ⇒ 9:62241609-62241746   CU655999,CH242-299D21,9:62221412-62245767
(Clone quality: bE299D21 on chr=9; Num_of_Contigs=9; )
LC8 location ⇒ 14:40506897-40506758   CU468509,CH242-66D17,14:40499959-40518844
(Clone quality: bE66D17 on chr=14; Num_of_Contigs=12; )
LC8 location ⇒ 14:40508513-40508381   CU468509,CH242-66D17,14:40499959-40518844
(Clone quality: bE66D17 on chr=14; Num_of_Contigs=12; )
LCK location ⇒ 6:60807025-60807102   FP102820,CH242-217B19,6:60804606-60808893
(Clone quality: bE217B19 on chr=6; Num_of_Contigs=18; )
LCK location ⇒ 6:60807194-60807293   FP102820,CH242-217B19,6:60804606-60808893
(Clone quality: bE217B19 on chr=6; Num_of_Contigs=18; )
LCN1 location ⇒ X:1658691-1658585 FP102438,CH242-227G12,X:1614901-1722511
(Clone quality: bE227G12 on chr=X; Num_of_Contigs=2; )
 
LCN1 location ⇒ X:3146793-3146878 CU855720,CH242-512P21,X:3139536-3256746
(Clone quality: bE512P21 on chr=X; Num_of_Contigs=10; )
 
LCN1 location ⇒ X:3445016-3445137 CU694849,CH242-236E18,X:3326006-3459219
(Clone quality: bE236E18 on chr=X; Num_of_Contigs=4; )
 
LCN1 location ⇒ X:909980-910084 FP015839,CH242-119P2,X:827887-930674
(Clone quality: bE119P2 on chr=X; Num_of_Contigs=2; )
 
LCP1 location ⇒ 11:20544497-20544721   CU372901,CH242-216D15,11:20538782-20546324
(Clone quality: bE216D15 on chr=11; Num_of_Contigs=16; )
LCP1 location ⇒ 11:20568626-20568792   CU367850,CH242-196G1,11:20560497-20572791
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
LCP1 location ⇒ 11:20584357-20584537   CU367850,CH242-196G1,11:20572892-20601509
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
LCP1 location ⇒ 11:20602932-20603305   CU367850,CH242-196G1,11:20601610-20603879
(Clone quality: bE196G1 on chr=11; Num_of_Contigs=7; )
LCP2 location ⇒ 16:50988440-50988672   CU915300,CH242-100L14,16:50928442-51005745
(Clone quality: bE100L14 on chr=16; Num_of_Contigs=2; )
LCP2 location ⇒ 16:51009514-51009712   CU915300,CH242-100L14,16:51005846-51108426
(Clone quality: bE100L14 on chr=16; Num_of_Contigs=2; )
LCP2 location ⇒ 16:51028948-51029107   CU915300,CH242-100L14,16:51005846-51108426
(Clone quality: bE100L14 on chr=16; Num_of_Contigs=2; )
LCP2 location ⇒ 16:51030727-51031377   CU915300,CH242-100L14,16:51005846-51108426
(Clone quality: bE100L14 on chr=16; Num_of_Contigs=2; )
LDLR location ⇒ 2:52434575-52434679   FP102365,CH242-142P24,2:52422357-52440708
(Clone quality: bE142P24 on chr=2; Num_of_Contigs=4; )
LDLR location ⇒ 2:52435758-52435879   FP102365,CH242-142P24,2:52422357-52440708
(Clone quality: bE142P24 on chr=2; Num_of_Contigs=4; )
LDLR location ⇒ 2:52436821-52437007   FP102365,CH242-142P24,2:52422357-52440708
(Clone quality: bE142P24 on chr=2; Num_of_Contigs=4; )
LDLR location ⇒ 2:52437098-52437207   FP102365,CH242-142P24,2:52422357-52440708
(Clone quality: bE142P24 on chr=2; Num_of_Contigs=4; )
LEAP2 location ⇒ 2:123104895-123104959 CU407038,CH242-18J12,2:123020435-123138962
(Clone quality: bE18J12 on chr=2; Num_of_Contigs=6; )
 
LEAP2 location ⇒ 2:123105157-123105299 CU407038,CH242-18J12,2:123020435-123138962
(Clone quality: bE18J12 on chr=2; Num_of_Contigs=6; )
 
LEAP2 location ⇒ 2:123105609-123105871 CU407038,CH242-18J12,2:123020435-123138962
(Clone quality: bE18J12 on chr=2; Num_of_Contigs=6; )
 
LEF1 location ⇒ 8:97666066-97666200   CU466301,CH242-502J19,8:97664280-97666569
(Clone quality: bE502J19 on chr=8; Num_of_Contigs=7; )
LEF1 location ⇒ 8:97741480-97741613   CU466301,CH242-502J19,8:97679656-97767699
(Clone quality: bE502J19 on chr=8; Num_of_Contigs=7; )
LEF1 location ⇒ 8:97749816-97749941   CU466301,CH242-502J19,8:97679656-97767699
(Clone quality: bE502J19 on chr=8; Num_of_Contigs=7; )
LEF1 location ⇒ 8:97750965-97751127   CU466301,CH242-502J19,8:97679656-97767699
(Clone quality: bE502J19 on chr=8; Num_of_Contigs=7; )
LEFTY2 location ⇒ 10:14017624-14017274   CU914379,CH242-206B3,10:14005937-14028474
(Clone quality: bE206B3 on chr=10; Num_of_Contigs=3; )
LEFTY2 location ⇒ 10:14018649-14018400   CU914379,CH242-206B3,10:14005937-14028474
(Clone quality: bE206B3 on chr=10; Num_of_Contigs=3; )
LEFTY2 location ⇒ 10:14051309-14050992   CU914379,CH242-206B3,10:14028575-14068754
(Clone quality: bE206B3 on chr=10; Num_of_Contigs=3; )
LEFTY2 location ⇒ 10:14055378-14055121   CU914379,CH242-206B3,10:14028575-14068754
(Clone quality: bE206B3 on chr=10; Num_of_Contigs=3; )
LEMD1 location ⇒ 9:63305514-63305392   FP102849,CH242-21K8,9:63285211-63309914
(Clone quality: bE21K8 on chr=9; Num_of_Contigs=13; )
LEMD1 location ⇒ 9:63306647-63306527   FP102849,CH242-21K8,9:63285211-63309914
(Clone quality: bE21K8 on chr=9; Num_of_Contigs=13; )
LEP location ⇒ 18:12258441-12258346   FP015781,CH242-4D7,18:12210462-12270304
(Clone quality: bE4D7 on chr=18; Num_of_Contigs=13; )
LEP location ⇒ 18:23287779-23287674 CU463080,CH242-269N20,18:23159073-23362655
(Clone quality: bE269N20 on chr=18; Num_of_Contigs=11; )
 
LEP location ⇒ 18:4644392-4644295   CU929780,CH242-369P20,18:4635348-4660486
(Clone quality: bE369P20 on chr=18; Num_of_Contigs=4; )
LEP location ⇒ 18:51429235-51429181   CU655978,CH242-170J15,18:51382351-51457200
(Clone quality: bE170J15 on chr=18; Num_of_Contigs=4; )
LGALS1 location ⇒ 5:6693166-6693016   CU856216,CH242-232G18,5:6680227-6698463
(Clone quality: bE232G18 on chr=5; Num_of_Contigs=6; )
LGALS1 location ⇒ 5:6693636-6693460   CU856216,CH242-232G18,5:6680227-6698463
(Clone quality: bE232G18 on chr=5; Num_of_Contigs=6; )
LGALS1 location ⇒ 5:6695057-6694978   CU856216,CH242-232G18,5:6680227-6698463
(Clone quality: bE232G18 on chr=5; Num_of_Contigs=6; )
LGALS1 location ⇒ 5:6695057-6694978   CU856216,CH242-232G18,5:6680227-6698463
(Clone quality: bE232G18 on chr=5; Num_of_Contigs=6; )
LGALS3 location ⇒ 1:193056013-193056102   CU855754,CH242-58I7,1:193052707-193060550
(Clone quality: bE58I7 on chr=1; Num_of_Contigs=12; )
LGALS3 location ⇒ 1:193065029-193065383   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
LGALS3 location ⇒ 1:193071494-193071665   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
LGALS3 location ⇒ 1:193073183-193073470   CU467727,CH242-310J12,1:193060551-193129971
(Clone quality: bE310J12 on chr=1; Num_of_Contigs=6; )
LGALS3BP location ⇒ 12:12677-12604 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; )
 
LGALS3BP location ⇒ 12:14319-14428 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; )
 
LGALS3BP location ⇒ 12:1731-1658 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; )
 
LGALS3BP location ⇒ 12:537-630 FP085448,CH242-272C22,12:1-58755
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; )
 
LGALS3BP location ⇒ X:12937671-12937591   CU207390,CH242-65K12,X:12858474-12986868
(Clone quality: bE65K12 on chr=X; Num_of_Contigs=4; )
LGALS3BP location ⇒ X:1708066-1708150 FP102438,CH242-227G12,X:1614901-1722511
(Clone quality: bE227G12 on chr=X; Num_of_Contigs=2; )
 
LGALS3BP location ⇒ X:38104890-38105018   FP085368,CH242-98A23,X:38103663-38126519
(Clone quality: bE98A23 on chr=X; Num_of_Contigs=4; )
LGALS3BP location ⇒ X:38413174-38413302   FP015835,CH242-515P8,X:38411628-38434861
(Clone quality: bE515P8 on chr=X; Num_of_Contigs=5; )
LGALS8 location ⇒ 14:56077936-56078130   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
LGALS8 location ⇒ 14:56080822-56080988   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
LGALS8 location ⇒ 14:56084242-56084365   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
LGALS8 location ⇒ 14:56085924-56086105   CU406971,CH242-320A14,14:56012844-56141165
(Clone quality: bE320A14 on chr=14; Num_of_Contigs=6; )
LGMN location ⇒ 7:122198929-122198814   CU571237,CH242-75O20,7:122153470-122210392
(Clone quality: bE75O20 on chr=7; Num_of_Contigs=3; )
LGMN location ⇒ 7:122199828-122199764   CU571237,CH242-75O20,7:122153470-122210392
(Clone quality: bE75O20 on chr=7; Num_of_Contigs=3; )
LGMN location ⇒ 7:122282148-122282212   CU467720,CH242-289F13,7:122278884-122284724
(Clone quality: bE289F13 on chr=7; Num_of_Contigs=18; )
LGMN location ⇒ 7:122283047-122283162   CU467720,CH242-289F13,7:122278884-122284724
(Clone quality: bE289F13 on chr=7; Num_of_Contigs=18; )
LGP2 location ⇒ 12:18380262-18380390   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
LGP2 location ⇒ 12:18380524-18380696   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
LGP2 location ⇒ 12:18380901-18381103   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
LGP2 location ⇒ 12:18381494-18381685   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
LGTN location ⇒ 9:131595076-131595279   FP102762,CH242-93E16,9:131593676-131603763
(Clone quality: bE93E16 on chr=9; Num_of_Contigs=10; )
LGTN location ⇒ 9:131714237-131714034   CU633844,CH242-3I15,9:131691528-131723324
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
LGTN location ⇒ 9:131733128-131732935   CU633844,CH242-3I15,9:131723425-131750889
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
LGTN location ⇒ 9:131734213-131734029   CU633844,CH242-3I15,9:131723425-131750889
(Clone quality: bE3I15 on chr=9; Num_of_Contigs=8; )
LIF location ⇒ 14:47996219-47995897 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; )
 
LIF location ⇒ 14:47999447-47996265 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; )
 
LIF location ⇒ 14:48000348-48000166 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; )
 
LIF location ⇒ 14:48002086-48002003 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; )
 
LIFR location ⇒ 16:21172310-21172404   CU633366,CH242-209G14,16:21149782-21240114
(Clone quality: bE209G14 on chr=16; Num_of_Contigs=10; )
LIFR location ⇒ 16:21174682-21174997   CU633366,CH242-209G14,16:21149782-21240114
(Clone quality: bE209G14 on chr=16; Num_of_Contigs=10; )
LIFR location ⇒ 16:21286560-21286245   CU929624,CH242-31K19,16:21261667-21439844
(Clone quality: bE31K19 on chr=16; Num_of_Contigs=2; )
LIFR location ⇒ 16:21288942-21288848   CU929624,CH242-31K19,16:21261667-21439844
(Clone quality: bE31K19 on chr=16; Num_of_Contigs=2; )
LIG4 location ⇒ 11:75984583-75984512   CU019584,CH242-370B14,11:75964063-75986868
(Clone quality: bE370B14 on chr=11; Num_of_Contigs=3; )
LIG4 location ⇒ 11:75988922-75987076   CU019584,CH242-370B14,11:75986969-76035774
(Clone quality: bE370B14 on chr=11; Num_of_Contigs=3; )
LILRA1 location ⇒ 16:76927534-76927834   FP085477,CH242-128B1,16:76914107-76931682
(Clone quality: bE128B1 on chr=16; Num_of_Contigs=5; )
LILRA1 location ⇒ 16:76996113-76996413   FP085477,CH242-128B1,16:76988341-77076053
(Clone quality: bE128B1 on chr=16; Num_of_Contigs=5; )
LILRA1 location ⇒ 16:77012008-77012085   FP085477,CH242-128B1,16:76988341-77076053
(Clone quality: bE128B1 on chr=16; Num_of_Contigs=5; )
LILRA1 location ⇒ 16:77030677-77030977   FP085477,CH242-128B1,16:76988341-77076053
(Clone quality: bE128B1 on chr=16; Num_of_Contigs=5; )
LILRA2 location ⇒ 6:40679732-40679427   CU914171,CH242-113P17,6:40677454-40685481
(Clone quality: bE113P17 on chr=6; Num_of_Contigs=7; )
LILRA2 location ⇒ 6:40969797-40969910 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11)
 
LILRA2 location ⇒ 6:40988214-40988327 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11)
 
LILRA2 location ⇒ 6:41033800-41034105 CR450381,PigE-108A11,6:40950931-41074617
(No clone quality info on bT108A11)
 
LILRA4L1* location ⇒ 6:12569-12650   FP102308,CH242-96G18,6:8267-26213
(Clone quality: bE96G18 on chr=6; Num_of_Contigs=17; )
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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