A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 18601 - 18700:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ITGB5 location ⇒ 13:101916570-101916632   CU466522,CH242-89F13,13:101913743-101925905
(Clone quality: bE89F13 on chr=13; Num_of_Contigs=11; )
ITGB5 location ⇒ 13:101925827-101925905    
ITGB5 location ⇒ 13:101931479-101931910   CU466522,CH242-89F13,13:101926006-101942805
(Clone quality: bE89F13 on chr=13; Num_of_Contigs=11; )
ITGB5 location ⇒ 13:101955488-101955652   CU466522,CH242-89F13,13:101942906-101974333
(Clone quality: bE89F13 on chr=13; Num_of_Contigs=11; )
ITGB6 location ⇒ 15:62349231-62349648   CU856485,CH242-79D11,15:62338501-62355620
(Clone quality: bE79D11 on chr=15; Num_of_Contigs=4; )
ITGB6 location ⇒ 15:62353894-62354119   CU856485,CH242-79D11,15:62338501-62355620
(Clone quality: bE79D11 on chr=15; Num_of_Contigs=4; )
ITGB6 location ⇒ 15:62413549-62413300   CU929017,CH242-136H2,15:62405838-62415702
(Clone quality: bE136H2 on chr=15; Num_of_Contigs=11; )
ITGB6 location ⇒ 15:62511624-62511207   CU929017,CH242-136H2,15:62499150-62512200
(Clone quality: bE136H2 on chr=15; Num_of_Contigs=11; )
ITGB7 location ⇒ 5:16878885-16878687   CU550678,CH242-340I21,5:16869474-16882505
(Clone quality: bE340I21 on chr=5; Num_of_Contigs=10; )
ITGB7 location ⇒ 5:16879236-16879014   CU550678,CH242-340I21,5:16869474-16882505
(Clone quality: bE340I21 on chr=5; Num_of_Contigs=10; )
ITGB7 location ⇒ 5:16879698-16879470   CU550678,CH242-340I21,5:16869474-16882505
(Clone quality: bE340I21 on chr=5; Num_of_Contigs=10; )
ITGB7 location ⇒ 5:16880224-16880036   CU550678,CH242-340I21,5:16869474-16882505
(Clone quality: bE340I21 on chr=5; Num_of_Contigs=10; )
ITGB8 location ⇒ 9:83947838-83947741   FP016202,CH242-105D13,9:83880612-83948504
(Clone quality: bE105D13 on chr=9; Num_of_Contigs=6; )
ITGB8 location ⇒ 9:83978367-83978313   FP016202,CH242-105D13,9:83973644-84004333
(Clone quality: bE105D13 on chr=9; Num_of_Contigs=6; )
ITGBL1 location ⇒ 11:71019307-71019459   CU633708,CH242-372E20,11:71006487-71032629
(Clone quality: bE372E20 on chr=11; Num_of_Contigs=1; )
ITGBL1 location ⇒ 11:71025827-71025952   CU633708,CH242-372E20,11:71006487-71032629
(Clone quality: bE372E20 on chr=11; Num_of_Contigs=1; )
ITGBL1 location ⇒ 11:71030441-71030584   CU633708,CH242-372E20,11:71006487-71032629
(Clone quality: bE372E20 on chr=11; Num_of_Contigs=1; )
ITGBL1 location ⇒ 11:71034283-71034427   CU633708,CH242-372E20,11:71032730-71059904
(Clone quality: bE372E20 on chr=11; Num_of_Contigs=1; )
ITIH1 location ⇒ 13:29489551-29489708   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH1 location ⇒ 13:29495410-29495593   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH1 location ⇒ 13:29500550-29500753   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH1 location ⇒ 13:29501605-29501779   CU466500,CH242-511E20,13:29487518-29519739
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH3 location ⇒ 13:15430171-15430054   CU915628,CH242-175K3,13:15400630-15517512
(Clone quality: bE175K3 on chr=13; Num_of_Contigs=3; )
ITIH3 location ⇒ 13:1949080-1948967   FP003587,CH242-127D11,13:1856315-1986266
(Clone quality: bE127D11 on chr=13; Num_of_Contigs=2; )
ITIH3 location ⇒ 13:25717004-25716871   CU633694,CH242-277F5,13:25598668-25748928
(Clone quality: bE277F5 on chr=13; Num_of_Contigs=2; )
ITIH3 location ⇒ 13:29382927-29382858   CU469164,CH242-456I18,13:29378087-29391739
(Clone quality: bE456I18 on chr=13; Num_of_Contigs=15; )
ITIH4 location ⇒ 13:29525387-29525169   CU466500,CH242-511E20,13:29519840-29526571
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH4 location ⇒ 13:29600154-29600317   CU466500,CH242-511E20,13:29591579-29610349
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH4 location ⇒ 13:29605683-29605866   CU466500,CH242-511E20,13:29591579-29610349
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITIH4 location ⇒ 13:29605955-29606142   CU466500,CH242-511E20,13:29591579-29610349
(Clone quality: bE511E20 on chr=13; Num_of_Contigs=7; )
ITK location ⇒ 16:63701278-63700769   CU896613,CH242-137H14,16:63700243-63711586
(Clone quality: bE137H14 on chr=16; Num_of_Contigs=5; )
ITK location ⇒ 16:63704664-63704506   CU896613,CH242-137H14,16:63700243-63711586
(Clone quality: bE137H14 on chr=16; Num_of_Contigs=5; )
ITK location ⇒ 16:63707799-63707745   CU896613,CH242-137H14,16:63700243-63711586
(Clone quality: bE137H14 on chr=16; Num_of_Contigs=5; )
ITM2B location ⇒ 11:18926994-18926222   FP085602,CH242-266M16,11:18913685-18928244
(Clone quality: bE266M16 on chr=11; Num_of_Contigs=8; )
ITM2B location ⇒ 11:18929276-18929121   FP085602,CH242-266M16,11:18928345-18955098
(Clone quality: bE266M16 on chr=11; Num_of_Contigs=8; )
ITM2B location ⇒ 11:18931337-18931131   FP085602,CH242-266M16,11:18928345-18955098
(Clone quality: bE266M16 on chr=11; Num_of_Contigs=8; )
ITM2B location ⇒ 11:18933199-18933069   FP085602,CH242-266M16,11:18928345-18955098
(Clone quality: bE266M16 on chr=11; Num_of_Contigs=8; )
ITM2C location ⇒ 15:124040993-124041163   CU571100,CH242-126N17,15:123990604-124093801
(Clone quality: bE126N17 on chr=15; Num_of_Contigs=2; )
ITM2C location ⇒ 15:124051165-124051355   CU571100,CH242-126N17,15:123990604-124093801
(Clone quality: bE126N17 on chr=15; Num_of_Contigs=2; )
ITM2C location ⇒ 15:124052588-124052738   CU571100,CH242-126N17,15:123990604-124093801
(Clone quality: bE126N17 on chr=15; Num_of_Contigs=2; )
ITM2C location ⇒ 15:124053494-124053590   CU571100,CH242-126N17,15:123990604-124093801
(Clone quality: bE126N17 on chr=15; Num_of_Contigs=2; )
ITPR1 location ⇒ 13:51047691-51047800   CU914792,CH242-10D7,13:51042795-51055141
(Clone quality: bE10D7 on chr=13; Num_of_Contigs=6; )
ITPR1 location ⇒ 13:51145644-51145761   CU914792,CH242-10D7,13:51119023-51160269
(Clone quality: bE10D7 on chr=13; Num_of_Contigs=6; )
ITPR1 location ⇒ 13:51156406-51156570   CU914792,CH242-10D7,13:51119023-51160269
(Clone quality: bE10D7 on chr=13; Num_of_Contigs=6; )
ITPR1 location ⇒ 13:51158765-51158865   CU914792,CH242-10D7,13:51119023-51160269
(Clone quality: bE10D7 on chr=13; Num_of_Contigs=6; )
IVNS1ABP location ⇒ 9:118909700-118908813   CU972398,CH242-133N16,9:118830470-118917038
(Clone quality: bE133N16 on chr=9; Num_of_Contigs=2; )
IVNS1ABP location ⇒ 9:118911217-118911050   CU972398,CH242-133N16,9:118830470-118917038
(Clone quality: bE133N16 on chr=9; Num_of_Contigs=2; )
IVNS1ABP location ⇒ 9:118912821-118912595   CU972398,CH242-133N16,9:118830470-118917038
(Clone quality: bE133N16 on chr=9; Num_of_Contigs=2; )
IVNS1ABP location ⇒ 9:118919149-118918974   CU570727,CH242-209D22,9:118917039-118996352
(Clone quality: bE209D22 on chr=9; Num_of_Contigs=3; )
IZUMO1 location ⇒ 6:37634587-37635203   CU929759,CH242-294C24,6:37595303-37722216
(Clone quality: bE294C24 on chr=6; Num_of_Contigs=3; )
JAG1 location ⇒ 17:19710935-19710727   CU672248,CH242-357N21,17:19683064-19711759
(Clone quality: bE357N21 on chr=17; Num_of_Contigs=3; )
JAG1 location ⇒ 17:19715520-19715468   CU672248,CH242-357N21,17:19711860-19724344
(Clone quality: bE357N21 on chr=17; Num_of_Contigs=3; )
JAG1 location ⇒ 17:19724378-19724071   CU672248,CH242-357N21,17:19711860-19724344
(Clone quality: bE357N21 on chr=17; Num_of_Contigs=3; )
CU041271,CH242-37O22,17:19724345-19772517
(Clone quality: bE37O22 on chr=17; Num_of_Contigs=2; )
JAG1 location ⇒ 17:19724862-19724786   CU041271,CH242-37O22,17:19724345-19772517
(Clone quality: bE37O22 on chr=17; Num_of_Contigs=2; )
JAK1 location ⇒ 6:103994831-103995033   CU694905,CH242-39L24,6:103981187-104011744
(Clone quality: bE39L24 on chr=6; Num_of_Contigs=4; )
JAK1 location ⇒ 6:103994831-103995033   CU694905,CH242-39L24,6:103981187-104011744
(Clone quality: bE39L24 on chr=6; Num_of_Contigs=4; )
JAK1 location ⇒ 6:104010381-104010724   CU694905,CH242-39L24,6:103981187-104011744
(Clone quality: bE39L24 on chr=6; Num_of_Contigs=4; )
JAK1 location ⇒ 6:104010381-104010724   CU694905,CH242-39L24,6:103981187-104011744
(Clone quality: bE39L24 on chr=6; Num_of_Contigs=4; )
JAK2 location ⇒ 1:226777213-226776007   CU861563,CH242-39E11,1:226772701-226787342
(Clone quality: bE39E11 on chr=1; Num_of_Contigs=5; )
JAK2 location ⇒ 1:226870974-226870650   CU861563,CH242-39E11,1:226828156-226877286
(Clone quality: bE39E11 on chr=1; Num_of_Contigs=5; )
JAK2 location ⇒ 1:227000943-227000730   CU928554,CH242-181K22,1:226995601-227011152
(Clone quality: bE181K22 on chr=1; Num_of_Contigs=4; )
JAK2 location ⇒ 1:227053047-227052794   CU928554,CH242-181K22,1:227040843-227053390
(Clone quality: bE181K22 on chr=1; Num_of_Contigs=4; )
JAK3 location ⇒ 2:62085173-62083858   CU463003,CH242-317A24,2:62084905-62151709
(Clone quality: bE317A24 on chr=2; Num_of_Contigs=2; )
CU928970,CH242-349K2,2:62018597-62084904
(Clone quality: bE349K2 on chr=2; Num_of_Contigs=3; )
JAK3 location ⇒ 2:62086351-62086239   CU463003,CH242-317A24,2:62084905-62151709
(Clone quality: bE317A24 on chr=2; Num_of_Contigs=2; )
JAK3 location ⇒ 2:62086940-62086709   CU463003,CH242-317A24,2:62084905-62151709
(Clone quality: bE317A24 on chr=2; Num_of_Contigs=2; )
JAK3 location ⇒ 2:62087367-62086784   CU463003,CH242-317A24,2:62084905-62151709
(Clone quality: bE317A24 on chr=2; Num_of_Contigs=2; )
JAM2 location ⇒ 13:1693-1806   CU928239,CH242-498F20,13:1-4335
(Clone quality: bE498F20 on chr=13; Num_of_Contigs=4; )
JAM2 location ⇒ 13:24499-24584   CU928239,CH242-498F20,13:4436-31895
(Clone quality: bE498F20 on chr=13; Num_of_Contigs=4; )
JAM2 location ⇒ 13:56021-55924   CU928239,CH242-498F20,13:48087-70232
(Clone quality: bE498F20 on chr=13; Num_of_Contigs=4; )
JAM2 location ⇒ 13:89602-89501   CU928239,CH242-498F20,13:77539-107266
(Clone quality: bE498F20 on chr=13; Num_of_Contigs=4; )
JAM3 location ⇒ 9:59144989-59145103   CU929202,CH242-306L17,9:59132748-59146122
(Clone quality: bE306L17 on chr=9; Num_of_Contigs=5; )
JAM3 location ⇒ 9:59148416-59148569   CU929202,CH242-306L17,9:59146223-59162267
(Clone quality: bE306L17 on chr=9; Num_of_Contigs=5; )
JAM3 location ⇒ 9:59148989-59149195   CU929202,CH242-306L17,9:59146223-59162267
(Clone quality: bE306L17 on chr=9; Num_of_Contigs=5; )
JAM3 location ⇒ 9:59151054-59151183   CU929202,CH242-306L17,9:59146223-59162267
(Clone quality: bE306L17 on chr=9; Num_of_Contigs=5; )
JFC1 location ⇒ 6:58235999-58236230   CU466983,CH242-5M3,6:58217448-58296419
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
JFC1 location ⇒ 6:58240594-58240755   CU466983,CH242-5M3,6:58217448-58296419
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
JFC1 location ⇒ 6:58242088-58242295   CU466983,CH242-5M3,6:58217448-58296419
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
JFC1 location ⇒ 6:58242484-58242714   CU466983,CH242-5M3,6:58217448-58296419
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
JUN location ⇒ 6:108925879-108926466   CU695066,CH242-491K2,6:108920156-108949332
(Clone quality: bE491K2 on chr=6; Num_of_Contigs=9; )
JUN location ⇒ 6:108926531-108927089   CU695066,CH242-491K2,6:108920156-108949332
(Clone quality: bE491K2 on chr=6; Num_of_Contigs=9; )
JUNB location ⇒ 2:56058224-56059087   CU914382,CH242-275M24,2:56025074-56111468
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
JUP location ⇒ 12:18671126-18670583   CU928665,CH242-332K23,12:18640749-18703424
(Clone quality: bE332K23 on chr=12; Num_of_Contigs=7; )
JUP location ⇒ 12:18679817-18679475   CU928665,CH242-332K23,12:18640749-18703424
(Clone quality: bE332K23 on chr=12; Num_of_Contigs=7; )
JUP location ⇒ 12:18685403-18685144   CU928665,CH242-332K23,12:18640749-18703424
(Clone quality: bE332K23 on chr=12; Num_of_Contigs=7; )
JUP location ⇒ 12:18886660-18886117   CU972362,CH242-2B19,12:18872559-18889314
(Clone quality: bE2B19 on chr=12; Num_of_Contigs=14; )
K6-IRS1 location ⇒ 5:16561832-16561777   CU639398,CH242-183O5,5:16561326-16595368
(Clone quality: bE183O5 on chr=5; Num_of_Contigs=7; )
K6-IRS1 location ⇒ 5:16588534-16588473   CU639398,CH242-183O5,5:16561326-16595368
(Clone quality: bE183O5 on chr=5; Num_of_Contigs=7; )
K6-IRS1 location ⇒ 5:16689190-16689132   CU457755,CH242-177O6,5:16641180-16699329
(Clone quality: bE177O6 on chr=5; Num_of_Contigs=3; )
K6-IRS1 location ⇒ 5:16721813-16721906   CU457755,CH242-177O6,5:16699430-16765044
(Clone quality: bE177O6 on chr=5; Num_of_Contigs=3; )
KAAG1 location ⇒ 7:20217461-20217320   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
KAAG1 location ⇒ 7:20220727-20220671   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
KAAG1 location ⇒ 7:20225473-20224952   CT737347,CH242-196L6,7:20166720-20328348
(Clone quality: bE196L6 on chr=7; Num_of_Contigs=1; )
KAL1 location ⇒ X:4033583-4033504 CU207413,CH242-507C8,X:3894828-4094962
(Clone quality: bE507C8 on chr=X; Num_of_Contigs=1; )
 
KAL1 location ⇒ X:4050491-4050359 CU207413,CH242-507C8,X:3894828-4094962
(Clone quality: bE507C8 on chr=X; Num_of_Contigs=1; )
 
KAL1 location ⇒ X:4053837-4053651 CU207413,CH242-507C8,X:3894828-4094962
(Clone quality: bE507C8 on chr=X; Num_of_Contigs=1; )
 
KAL1 location ⇒ X:4064652-4064457 CU207413,CH242-507C8,X:3894828-4094962
(Clone quality: bE507C8 on chr=X; Num_of_Contigs=1; )
 
KALRN location ⇒ 13:102097654-102097427   CU855847,CH242-86O8,13:102069582-102098542
(Clone quality: bE86O8 on chr=13; Num_of_Contigs=7; )
KALRN location ⇒ 13:102100123-102099884   CU855847,CH242-86O8,13:102098643-102103578
(Clone quality: bE86O8 on chr=13; Num_of_Contigs=7; )
KCNA3 location ⇒ 14:50986936-50986782   CU468588,CH242-282B12,14:50969832-51085093
(Clone quality: bE282B12 on chr=14; Num_of_Contigs=2; )
KCNA3 location ⇒ 14:50987310-50986997   CU468588,CH242-282B12,14:50969832-51085093
(Clone quality: bE282B12 on chr=14; Num_of_Contigs=2; )
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Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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