A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 13201 - 13300:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
USP1   ENSSSCG00000003820 6:106099375-106110180   FP067351,CH242-80C11,6:106051433-106124076
(Clone quality: bE80C11 on chr=6; Num_of_Contigs=4; )
USP10   ENSSSCG00000002670 6:2571484-2589334    
USP11   ENSSSCG00000012273 X:41895477-41910308    
USP12   ENSSSCG00000009302 11:3658758-3709614    
USP13 ENSSSCG00000011765 13:89535482-89574483    
USP15   ENSSSCG00000000457 5:26393960-26500256    
USP19   ENSSSCG00000011375 13:26677517-26686908   CU856115,CH242-45E6,13:26664108-26688116
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
USP2 ENSSSCG00000015120 9:45174159-45180861   CU915638,CH242-115L13,9:45168416-45215016
(Clone quality: bE115L13 on chr=9; Num_of_Contigs=6; )
USP21   ENSSSCG00000006362 4:92797517-92803656   CU606874,CH242-28G15,4:92745461-92814223
(Clone quality: bE28G15 on chr=4; Num_of_Contigs=6; )
USP26   ENSSSCG00000012678 X:107014423-107017137 CU694746,CH242-67N20,X:106964653-107076890
(Clone quality: bE67N20 on chr=X; Num_of_Contigs=2; ) 		 
USP28   ENSSSCG00000015052 9:40380230-40426454    
USP3   ENSSSCG00000004563 1:111821233-111842067   CU550694,CH242-9A12,1:111815744-111862500
(Clone quality: bE9A12 on chr=1; Num_of_Contigs=4; )
USP30   ENSSSCG00000009940 14:42045138-42072928   CT954284,CH242-241M1,14:42019840-42206297
(Clone quality: bE241M1 on chr=14; Num_of_Contigs=1; )
USP31   ENSSSCG00000007834 3:20909513-21012430    
USP34   ENSSSCG00000008382 3:74019457-74204561    
USP35   ENSSSCG00000014892 9:12745944-12748991   CU694636,CH242-522D10,9:12733842-12749242
(Clone quality: bE522D10 on chr=9; Num_of_Contigs=6; )
USP36   ENSSSCG00000017165 12:1933672-1965370 CU942393,CH242-200M2,12:1864056-2044534
(Clone quality: bE200M2 on chr=14; Num_of_Contigs=6; ) 		 
USP37   ENSSSCG00000016194 15:113668384-113748113    
USP38   ENSSSCG00000009049 8:72797910-72807663   CU930040,CH242-12N22,8:72797520-72810487
(Clone quality: bE12N22 on chr=8; Num_of_Contigs=2; )
USP39   ENSSSCG00000008235 3:54069003-54084558   CU928286,CH242-219K12,3:54043219-54085564
(Clone quality: bE219K12 on chr=3; Num_of_Contigs=4; )
USP4   ENSSSCG00000011383 13:26814246-26830023   CU856115,CH242-45E6,13:26808459-26832486
(Clone quality: bE45E6 on chr=13; Num_of_Contigs=7; )
USP40   ENSSSCG00000016306 15:126578143-126680753    
USP42   ENSSSCG00000007594 3:4167290-4180947    
USP43   ENSSSCG00000017995 12:51631115-51687702   CU929537,CH242-329E9,12:51618719-51692234
(Clone quality: bE329E9 on chr=12; Num_of_Contigs=5; )
USP44   ENSSSCG00000000898 5:82940763-82952801    
USP45   ENSSSCG00000004351 1:69751812-69809611   CU041276,CH242-402K9,1:69742747-69847842
(Clone quality: bE402K9 on chr=1; Num_of_Contigs=3; )
USP47   ENSSSCG00000013402 2:44020814-44083938    
USP48   ENSSSCG00000003516 6:54976002-54986824   CU915824,CH242-56H10,6:54974452-54991615
(Clone quality: bE56H10 on chr=6; Num_of_Contigs=9; )
USP49   ENSSSCG00000001629 7:42569363-42581335    
USP5   ENSSSCG00000000684 5:59892529-59904370    
USP50   ENSSSCG00000004638 1:126227376-126397134    
USP54   ENSSSCG00000010302 14:79609218-79678282    
USP7   ENSSSCG00000007907 3:29792405-29848926    
USP8   ENSSSCG00000004639 1:126262882-126330434    
USP9X   ENSSSCG00000012251 X:36384105-36584255    
USPL1   ENSSSCG00000009328 11:6761822-6773482 CU062617,CH242-96H3,11:6637457-6779643
(Clone quality: bE96H3 on chr=11; Num_of_Contigs=1; ) 		 
UST   ENSSSCG00000004111 1:17812596-17863104    
UTF1   ENSSSCG00000010771 14:147937297-147938633    
UTP11L   ENSSSCG00000003645 6:63569864-63583222    
UTP18   ENSSSCG00000017593 12:25170730-25209079    
UTP20   ENSSSCG00000000869 5:78226281-78452363    
UTP23   ENSSSCG00000006017 4:21884676-21890861   CU914669,CH242-39F16,4:21869776-21892202
(Clone quality: bE39F16 on chr=4; Num_of_Contigs=8; )
UTP6 ENSSSCG00000017745 12:40849798-40876524   FP089481,CH242-212P22,12:40732922-40899579
(Clone quality: bE212P22 on chr=12; Num_of_Contigs=1; )
UTS2D   ENSSSCG00000011816 13:96843385-96851240    
UTX ENSSSCG00000012262 X:39996571-40050956    
UXS1   ENSSSCG00000008143 3:44005314-44096991    
UXT   ENSSSCG00000012280 X:42144196-42152068   FP015952,CH242-69I19,X:42126488-42205335
(Clone quality: bE69I19 on chr=X; Num_of_Contigs=6; )
V7 ENSSSCG00000000936 5:92051099-92076522    
V7 ENSSSCG00000006734 4:107816226-107847307   CU468873,CH242-284J24,4:107815328-107859077
(Clone quality: bE284J24 on chr=4; Num_of_Contigs=15; )
VAC14   ENSSSCG00000002729 6:10058362-10080791   CU638837,CH242-1N3,6:9881584-10081629
(Clone quality: bE1N3 on chr=6; Num_of_Contigs=2; )
VAMP1   ENSSSCG00000000703 5:60200176-60204632   CU633552,CH242-193I18,5:60186767-60298754
(Clone quality: bE193I18 on chr=5; Num_of_Contigs=2; )
VAMP2   ENSSSCG00000017984 12:50606157-50608091   CU914306,CH242-98O15,12:50562814-50608727
(Clone quality: bE98O15 on chr=12; Num_of_Contigs=9; )
VAMP4   ENSSSCG00000015482 9:107133023-107165701   CU928019,CH242-102L6,9:107032719-107220326
(Clone quality: bE102L6 on chr=9; Num_of_Contigs=1; )
VAMP5   ENSSSCG00000008231 3:54044733-54045914   CU928286,CH242-219K12,3:54043219-54085564
(Clone quality: bE219K12 on chr=3; Num_of_Contigs=4; )
VANGL1   ENSSSCG00000006746 4:109313161-109352730    
VANGL2   ENSSSCG00000006383 4:93503022-93510679   CU179691,CH242-251N5,4:93490988-93516813
(Clone quality: bE251N5 on chr=4; Num_of_Contigs=5; )
VAPB   ENSSSCG00000007514 17:61197833-61262777    
VARS ENSSSCG00000001384 7:27361729-27373768 CT971577,CH242-239H1,7:27216113-27394697
(Clone quality: bE239H1 on chr=7; Num_of_Contigs=1; ) 		 
VARS2   ENSSSCG00000001384 7:27361729-27373768 CT971577,CH242-239H1,7:27216113-27394697
(Clone quality: bE239H1 on chr=7; Num_of_Contigs=1; ) 		 
VASH1   ENSSSCG00000002389 7:107923069-107936536    
VASH2   ENSSSCG00000015589 9:122947611-122982366   CU928431,CH242-12J10,9:122912528-122996434
(Clone quality: bE12J10 on chr=9; Num_of_Contigs=5; )
VASP ENSSSCG00000002513 7:130257886-130314992    
VASP ENSSSCG00000016461 18:5778897-5867906    
VAT1 ENSSSCG00000009601 14:3964476-3991654   CU468169,CH242-117E9,14:3935323-4002125
(Clone quality: bE117E9 on chr=14; Num_of_Contigs=3; )
VAT1L   ENSSSCG00000002696 6:7134032-7218551    
Vault   ENSSSCG00000018796 X:24071806-24071894 FP102153,CH242-292J8,X:23974963-24151552
(Clone quality: bE292J8 on chr=X; Num_of_Contigs=1; ) 		 
VAV1 ENSSSCG00000013553 2:50182194-50211641   CU681822,CH242-171H11,2:50148903-50216237
(Clone quality: bE171H11 on chr=2; Num_of_Contigs=13; )
VAV2 ENSSSCG00000005743 1:288555013-288597646    
VAV3 ENSSSCG00000006851 4:116439246-116809019    
VBP1   ENSSSCG00000012811 X:123413161-123434110 CU861979,CH242-305A15,X:123389549-123544360
(Clone quality: bE305A15 on chr=X; Num_of_Contigs=11; ) 		 
VCA-2 ENSSSCG00000017578 12:24655910-24790905    
VCAM1 ENSSSCG00000006862 4:122369849-122384181   CU467566,CH242-347G20,4:122358778-122411545
(Clone quality: bE347G20 on chr=4; Num_of_Contigs=10; )
VCAN   ENSSSCG00000014136 2:81117534-81217023    
VCL ENSSSCG00000010313 14:80002216-80113814    
VCP ENSSSCG00000005300 1:246885131-246891351   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCP ENSSSCG00000016688 18:41992393-42112037    
VCPIP1 ENSSSCG00000006209 4:70606398-70609218   CU694736,CH242-488G24,4:70593364-70620019
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VDAC1   ENSSSCG00000014296 2:124100578-124132798   CU928302,CH242-266O13,2:124032962-124185534
(Clone quality: bE266O13 on chr=2; Num_of_Contigs=2; )
VDAC2   ENSSSCG00000010320 14:80983232-80998329    
VEGF ENSSSCG00000001695 7:45212174-45226773 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; ) 		 
VEGF ENSSSCG00000003048 6:34715572-34728644    
VEGF ENSSSCG00000006466 4:96975677-96984979   CU151867,CH242-283E3,4:96970968-96992486
(Clone quality: bE283E3 on chr=4; Num_of_Contigs=3; )
VEGF ENSSSCG00000008844 8:36147302-36193200    
VEGF ENSSSCG00000008871 8:39641095-39655063   CU694633,CH242-50J11,8:39612409-39672403
(Clone quality: bE50J11 on chr=8; Num_of_Contigs=3; )
VEGF ENSSSCG00000009320 11:5109985-5182015    
VEGFA ENSSSCG00000001695 7:45212174-45226773 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; ) 		 
VEGFB ENSSSCG00000013037 2:6257340-6425983    
VEGFC ENSSSCG00000015770 15:35992060-36022123   CU855957,CH242-117E11,15:35977438-36022572
(Clone quality: bE117E11 on chr=15; Num_of_Contigs=3; )
VEPH1   ENSSSCG00000011726 13:76943354-77196954    
VEZF1   ENSSSCG00000017623 12:31821607-31831017    
VEZT   ENSSSCG00000000900 5:83019042-83075343    
VGLL2   ENSSSCG00000004255 1:46534886-46558313    
VGLL3   ENSSSCG00000011998 13:123460953-123482911   CU855502,CH242-220K13,13:123385679-123484764
(Clone quality: bE220K13 on chr=13; Num_of_Contigs=4; )
VHL   ENSSSCG00000011567 13:55518347-55524222   CU655990,CH242-268L7,13:55512556-55562333
(Clone quality: bE268L7 on chr=13; Num_of_Contigs=5; )
VIL1 ENSSSCG00000016196 15:113753166-113781747   CU570813,CH242-128B23,15:113737340-113786153
(Clone quality: bE128B23 on chr=15; Num_of_Contigs=4; )
VIL2 ENSSSCG00000004058 1:9726842-9735175   CU498836,CH242-100E21,1:9701420-9739940
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
VILL   ENSSSCG00000011246 13:18719987-18735496   FP102094,CH242-358M17,13:18718581-18739574
(Clone quality: bE358M17 on chr=13; Num_of_Contigs=15; )
VIM ENSSSCG00000011033 10:41795515-41804213   CU570641,CH242-190K24,10:41776330-41805430
(Clone quality: bE190K24 on chr=10; Num_of_Contigs=3; )
VIP ENSSSCG00000011280 13:21872535-21944268    
VIP ENSSSCG00000013869 2:61413944-61520376    
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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