A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Records 10701 - 10800:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
SLA ENSSSCG00000001228 7:24434481-24435039   FP085552,CH242-74M17,7:24423533-24504970
(Clone quality: bE74M17 on chr=7; Num_of_Contigs=9; )
SLA ENSSSCG00000001231 7:24498283-24532919    
SLA ENSSSCG00000001341 7:26558428-26569310 CU498826,CH242-119D24,7:26553813-26728014
(Clone quality: bE119D24 on chr=7; Num_of_Contigs=31; ) 		 
SLA ENSSSCG00000001396 7:27580187-27583921    
SLA ENSSSCG00000001398 7:27604072-27608114 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
SLA ENSSSCG00000001453 7:29095605-29101239 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA ENSSSCG00000001455 7:29171940-29184604 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA ENSSSCG00000001457 7:29239625-29247871 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA ENSSSCG00000001459 7:29301032-29308499 CU633196,CH242-203E5,7:29272940-29352095
(Clone quality: bE203E5 on chr=7; Num_of_Contigs=1; ) 		 
SLA ENSSSCG00000005949 4:7264040-7285290   CU469018,CH242-373B14,4:7253315-7292353
(Clone quality: bE373B14 on chr=4; Num_of_Contigs=10; )
SLA-3 ENSSSCG00000001229 7:24459993-24463671   FP085552,CH242-74M17,7:24423533-24504970
(Clone quality: bE74M17 on chr=7; Num_of_Contigs=9; )
SLA-5 ENSSSCG00000001227 7:24377123-24396966    
SLA-5 ENSSSCG00000001229 7:24459993-24463671   FP085552,CH242-74M17,7:24423533-24504970
(Clone quality: bE74M17 on chr=7; Num_of_Contigs=9; )
SLA-6 ENSSSCG00000001398 7:27604072-27608114 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
SLA-7 ENSSSCG00000001397 7:27593568-27596822 CU467793,CH242-60C3,7:27581747-27762222
(Clone quality: bE60C3 on chr=7; Num_of_Contigs=1; ) 		 
SLA-8 ENSSSCG00000001396 7:27580187-27583921    
SLA-9 ENSSSCG00000001227 7:24377123-24396966    
SLA-9 ENSSSCG00000001229 7:24459993-24463671   FP085552,CH242-74M17,7:24423533-24504970
(Clone quality: bE74M17 on chr=7; Num_of_Contigs=9; )
SLA-9 ENSSSCG00000001230 7:24483668-24483922   FP085552,CH242-74M17,7:24423533-24504970
(Clone quality: bE74M17 on chr=7; Num_of_Contigs=9; )
SLA-DMA ENSSSCG00000001470 7:29509208-29513680 CU618315,CH242-254M4,7:29473579-29573903
(Clone quality: bE254M4 on chr=7; Num_of_Contigs=1; ) 		 
SLA-DMB ENSSSCG00000001469 7:29494987-29500822 CU618315,CH242-254M4,7:29473579-29573903
(Clone quality: bE254M4 on chr=7; Num_of_Contigs=1; ) 		 
SLA-DOA ENSSSCG00000001470 7:29509208-29513680 CU618315,CH242-254M4,7:29473579-29573903
(Clone quality: bE254M4 on chr=7; Num_of_Contigs=1; ) 		 
SLA-DOB ENSSSCG00000001459 7:29301032-29308499 CU633196,CH242-203E5,7:29272940-29352095
(Clone quality: bE203E5 on chr=7; Num_of_Contigs=1; ) 		 
SLA-DQA ENSSSCG00000001456 7:29224054-29229751 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA-DQA1 ENSSSCG00000001456 7:29224054-29229751 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA-DQB ENSSSCG00000001457 7:29239625-29247871 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA-DQB1 ENSSSCG00000001457 7:29239625-29247871 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA-DRA ENSSSCG00000001453 7:29095605-29101239 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA-DRB ENSSSCG00000001455 7:29171940-29184604 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA-DRB1 ENSSSCG00000001455 7:29171940-29184604 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLA-DRB2 ENSSSCG00000001454 7:29153061-29164786 CU468849,CH242-213K14,7:29079506-29272939
(Clone quality: bE213K14 on chr=7; Num_of_Contigs=6; ) 		 
SLAIN2   ENSSSCG00000008821 8:32756226-32801534    
SLAMF1 ENSSSCG00000006380 4:93320018-93356552   CU915315,CH242-208F9,4:93261946-93408226
(Clone quality: bE208F9 on chr=4; Num_of_Contigs=2; )
SLAMF2 ENSSSCG00000006379 4:93278346-93292708   CU915315,CH242-208F9,4:93261946-93408226
(Clone quality: bE208F9 on chr=4; Num_of_Contigs=2; )
SLAMF5 ENSSSCG00000006381 4:93381789-93570006    
SLAMF6 ENSSSCG00000006382 4:93428233-93449121    
SLAMF7 ENSSSCG00000006378 4:93220455-93235041   CU606866,CH242-143J3,4:93072841-93235164
(Clone quality: bE143J3 on chr=4; Num_of_Contigs=1; )
SLAMF8 ENSSSCG00000006398 4:93983680-93994246   CU856127,CH242-86L20,4:93963235-94027316
(Clone quality: bE86L20 on chr=4; Num_of_Contigs=6; )
SLAMF9 ENSSSCG00000006400 4:94052098-94054645   CU856127,CH242-86L20,4:94027417-94074463
(Clone quality: bE86L20 on chr=4; Num_of_Contigs=6; )
SLBP   ENSSSCG00000008676 8:168043-178763   FP102127,CH242-261D5,8:164622-185326
(Clone quality: bE261D5 on chr=8; Num_of_Contigs=8; )
SLC10A1   ENSSSCG00000002313 7:101797444-101817645 CT737423,CH242-28F9,7:101687301-101874212
(Clone quality: bE28F9 on chr=7; Num_of_Contigs=2; ) 		 
SLC10A4   ENSSSCG00000008823 8:32894761-32897840    
SLC10A7   ENSSSCG00000009035 8:70855254-71049217    
SLC11A1 ENSSSCG00000016190 15:113574179-113574788   CU550681,CH242-392C2,15:113574174-113576620
(Clone quality: bE392C2 on chr=15; Num_of_Contigs=23; )
SLC12A1   ENSSSCG00000004659 1:128781933-128870974    
SLC12A2   ENSSSCG00000014255 2:118727614-118817356    
SLC12A5   ENSSSCG00000007437 17:50254030-50287590    
SLC12A6   ENSSSCG00000002243 7:88011136-88037300   CU407046,CH242-221M18,7:87977656-88060858
(Clone quality: bE221M18 on chr=7; Num_of_Contigs=3; )
SLC12A8   ENSSSCG00000011860 13:101661653-101678573   CU633365,CH242-203M21,13:101647226-101685321
(Clone quality: bE203M21 on chr=13; Num_of_Contigs=7; )
SLC13A1   ENSSSCG00000016609 18:22306552-22364907 CU457413,CH242-454C22,18:22286896-22481750
(Clone quality: bE454C22 on chr=18; Num_of_Contigs=3; ) 		 
SLC13A2   ENSSSCG00000017763 12:42546442-42567505    
SLC13A3   ENSSSCG00000007449 17:50826218-50899885    
SLC13A4   ENSSSCG00000016527 18:11960808-12001684   CU694894,CH242-34G1,18:11899902-12006322
(Clone quality: bE34G1 on chr=18; Num_of_Contigs=4; )
SLC13A5   ENSSSCG00000017888 12:47927418-47952186    
SLC14A1 ENSSSCG00000004492 1:99161725-99183172    
SLC14A2   ENSSSCG00000004491 1:99064230-99123148   CU467546,CH242-261D4,1:99033807-99138531
(Clone quality: bE261D4 on chr=1; Num_of_Contigs=4; )
SLC15A1 ENSSSCG00000009513 11:68619739-68654635    
SLC15A2   ENSSSCG00000011879 13:104164595-104167897   CU694714,CH242-321J16,13:104162781-104205409
(Clone quality: bE321J16 on chr=13; Num_of_Contigs=1; )
SLC15A5   ENSSSCG00000000598 5:53856973-53925760    
SLC16A1 ENSSSCG00000006769 4:111879347-111914029    
SLC16A10   ENSSSCG00000004417 1:80652904-80667986   FP102400,CH242-288J22,1:80652287-80683720
(Clone quality: bE288J22 on chr=1; Num_of_Contigs=3; )
SLC16A11   ENSSSCG00000017925 12:49555132-49557519    
SLC16A12   ENSSSCG00000010455 14:106177734-106268713    
SLC16A13   ENSSSCG00000017926 12:49558540-49561985   CU914703,CH242-254H21,12:49555381-49564490
(Clone quality: bE254H21 on chr=12; Num_of_Contigs=9; )
SLC16A14   ENSSSCG00000016260 15:123490304-123491614   CU607086,CH242-147K21,15:123489499-123492358
(Clone quality: bE147K21 on chr=15; Num_of_Contigs=26; )
SLC16A2   ENSSSCG00000012418 X:58961778-58973445   CU856210,CH242-133C8,X:58941620-58992669
(Clone quality: bE133C8 on chr=X; Num_of_Contigs=8; )
SLC16A4   ENSSSCG00000006808 4:114204503-114214126   CU915404,CH242-292M23,4:114190001-114215484
(Clone quality: bE292M23 on chr=4; Num_of_Contigs=12; )
SLC16A5   ENSSSCG00000017215 12:4367895-4378941 CU928896,CH242-521B23,12:4294467-4388657
(Clone quality: bE521B23 on chr=12; Num_of_Contigs=4; ) 		 
SLC16A7 ENSSSCG00000000456 5:23885870-24040302    
SLC16A8   ENSSSCG00000000113 5:6357460-6359833   CU633351,CH242-161B9,5:6340838-6445691
(Clone quality: bE161B9 on chr=5; Num_of_Contigs=5; )
SLC16A9 ENSSSCG00000010210 14:65653558-65733698    
SLC17A1   ENSSSCG00000001107 7:21752380-21769511   CU234127,CH242-38G11,7:21744013-21771050
(Clone quality: bE38G11 on chr=7; Num_of_Contigs=4; )
SLC17A2   ENSSSCG00000001109 7:21834099-21851446   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
SLC17A4   ENSSSCG00000001106 7:21679541-21701649   CU234127,CH242-38G11,7:21615284-21708972
(Clone quality: bE38G11 on chr=7; Num_of_Contigs=4; )
SLC17A5   ENSSSCG00000004486 1:97476511-97508094    
SLC17A6   ENSSSCG00000013343 2:34487230-34524223 CU928035,CH242-451D16,2:34371290-34570417
(Clone quality: bE451D16 on chr=2; Num_of_Contigs=1; ) 		 
SLC17A7   ENSSSCG00000003170 6:38022095-38031264   FP102665,CH242-289C15,6:38017263-38038160
(Clone quality: bE289C15 on chr=6; Num_of_Contigs=6; )
SLC17A8   ENSSSCG00000000876 5:79504847-79560410    
SLC17A9   ENSSSCG00000001108 7:21796209-21803042   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
SLC18A1   ENSSSCG00000009601 14:3964476-3991654   CU468169,CH242-117E9,14:3935323-4002125
(Clone quality: bE117E9 on chr=14; Num_of_Contigs=3; )
SLC18A2   ENSSSCG00000010668 14:133222166-133226981   CU468444,CH242-75D17,14:133216687-133236214
(Clone quality: bE75D17 on chr=14; Num_of_Contigs=6; )
SLC19A2   ENSSSCG00000006290 4:84598339-84623218 CU179726,CH242-320P15,4:84431793-84627616
(Clone quality: bE320P15 on chr=4; Num_of_Contigs=2; ) 		 
SLC1A1   ENSSSCG00000005222 1:227504516-227581929    
SLC1A2 ENSSSCG00000013296 2:24078355-24106165 FP102395,CH242-89L24,2:24070203-24124283
(Clone quality: bE89L24 on chr=2; Num_of_Contigs=2; ) 		 
SLC1A3 ENSSSCG00000016841 16:19372955-19456093    
SLC1A4   ENSSSCG00000008361 3:70952186-70955390   CU694922,CH242-490O4,3:70949006-70958252
(Clone quality: bE490O4 on chr=3; Num_of_Contigs=11; )
SLC1A5   ENSSSCG00000003105 6:36406154-36419430   FP102520,CH242-105K10,6:36396758-36420546
(Clone quality: bE105K10 on chr=6; Num_of_Contigs=11; )
SLC1A6   ENSSSCG00000013833 2:60093297-60107747   CU915718,CH242-156C19,2:60080233-60146626
(Clone quality: bE156C19 on chr=2; Num_of_Contigs=6; )
SLC1A7   ENSSSCG00000003852 6:113002672-113042034   CU457407,CH242-32C10,6:112971956-113073523
(Clone quality: bE32C10 on chr=6; Num_of_Contigs=4; )
SLC20A1 ENSSSCG00000008093 3:39164471-39178511   CU468646,CH242-150P16,3:39162908-39178589
(Clone quality: bE150P16 on chr=3; Num_of_Contigs=14; )
SLC20A2   ENSSSCG00000007027 17:11684828-11696169    
SLC22A1   ENSSSCG00000004041 1:8342554-8493870    
SLC22A10   ENSSSCG00000013058 2:7397900-7414319   CU856126,CH242-83B5,2:7376724-7438568
(Clone quality: bE83B5 on chr=2; Num_of_Contigs=5; )
SLC22A12   ENSSSCG00000013025 2:5956009-5963155   CU468547,CH242-388P19,2:5950754-5963980
(Clone quality: bE388P19 on chr=2; Num_of_Contigs=12; )
SLC22A13   ENSSSCG00000011256 13:19146069-19153361   CU633398,CH242-322L18,13:19047156-19166830
(Clone quality: bE322L18 on chr=13; Num_of_Contigs=3; )
SLC22A14   ENSSSCG00000011255 13:19112438-19141042   CU633398,CH242-322L18,13:19047156-19166830
(Clone quality: bE322L18 on chr=13; Num_of_Contigs=3; )
SLC22A15   ENSSSCG00000006743 4:108983750-109072718    
SLC22A16   ENSSSCG00000004399 1:79477108-79519854    
SLC22A17   ENSSSCG00000002025 7:82073543-82078995   CU633625,CH242-116C14,7:82041923-82116183
(Clone quality: bE116C14 on chr=7; Num_of_Contigs=8; )
SLC22A18   ENSSSCG00000012855 2:366376-371582   FP102729,CH242-528B20,2:366171-373048
(Clone quality: bE528B20 on chr=2; Num_of_Contigs=10; )
Go to records:
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Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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