A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IKBKE location ⇒ 9:131387309-131387205   FP102872,CH242-139J15,9:131386519-131396298
(Clone quality: bE139J15 on chr=9; Num_of_Contigs=9; )
IKBKE location ⇒ 9:131389234-131389120   FP102872,CH242-139J15,9:131386519-131396298
(Clone quality: bE139J15 on chr=9; Num_of_Contigs=9; )
IKBKE location ⇒ 9:131657112-131657226   FP102762,CH242-93E16,9:131652323-131658666
(Clone quality: bE93E16 on chr=9; Num_of_Contigs=10; )
IKBKE location ⇒ 9:131658940-131659044   FP102762,CH242-93E16,9:131658767-131669215
(Clone quality: bE93E16 on chr=9; Num_of_Contigs=10; )
IKBKG ENSSSCG00000012825 X:123747326-123760388   CU862037,CH242-180B5,X:123746942-123765458
(Clone quality: bE180B5 on chr=X; Num_of_Contigs=12; )
IKBKG location ⇒ X:123758920-123759064   CU862037,CH242-180B5,X:123746942-123765458
(Clone quality: bE180B5 on chr=X; Num_of_Contigs=12; )
IKBKG location ⇒ X:123759278-123759425   CU862037,CH242-180B5,X:123746942-123765458
(Clone quality: bE180B5 on chr=X; Num_of_Contigs=12; )
IKBKG location ⇒ X:123759535-123759600   CU862037,CH242-180B5,X:123746942-123765458
(Clone quality: bE180B5 on chr=X; Num_of_Contigs=12; )
IKBKG location ⇒ X:123762095-123762188   CU862037,CH242-180B5,X:123746942-123765458
(Clone quality: bE180B5 on chr=X; Num_of_Contigs=12; )
IKZF1 ENSSSCG00000015629 9:128225253-128240015    
IKZF3 ENSSSCG00000017494 12:20429240-20521874    
IKZF4 ENSSSCG00000000375 5:20381332-20386120   CU457395,CH242-13B13,5:20381331-20400897
(Clone quality: bE13B13 on chr=5; Num_of_Contigs=23; )
IKZF5 ENSSSCG00000010722 14:138991388-138996149   CT956005,CH242-11G17,14:138966488-139020350
(Clone quality: bE11G17 on chr=14; Num_of_Contigs=9; )
IL-28B   location ⇒ 14:138710248-138710148   FP236263,CH242-159G20,14:138703168-138720557
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
IL-28B   location ⇒ 14:138710418-138710334   FP236263,CH242-159G20,14:138703168-138720557
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
IL-28B   location ⇒ 14:138710680-138710532   FP236263,CH242-159G20,14:138703168-138720557
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
IL-28B   location ⇒ 14:138711466-138711319   FP236263,CH242-159G20,14:138703168-138720557
(Clone quality: bE159G20 on chr=14; Num_of_Contigs=8; )
IL10 ENSSSCG00000015652 9:131944301-131948292   CU655936,CH242-369P7,9:131941408-131957326
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL10 location ⇒ 9:131944471-131943638   CU655936,CH242-369P7,9:131941408-131957326
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL10 location ⇒ 9:131944471-131943638   CU655936,CH242-369P7,9:131941408-131957326
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL10 location ⇒ 9:131948285-131948069   CU655936,CH242-369P7,9:131941408-131957326
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL10 location ⇒ 9:131948285-131948069   CU655936,CH242-369P7,9:131941408-131957326
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL10RA ENSSSCG00000015085 9:44231877-44244316   FP102136,CH242-1A1,9:44193617-44246637
(Clone quality: bE1A1 on chr=9; Num_of_Contigs=15; )
IL10RA location ⇒ 9:118651840-118651891   CU915492,CH242-37F23,9:118647499-118655502
(Clone quality: bE37F23 on chr=9; Num_of_Contigs=8; )
IL10RA location ⇒ 9:118770778-118770727   CU972398,CH242-133N16,9:118752868-118830369
(Clone quality: bE133N16 on chr=9; Num_of_Contigs=2; )
IL10RA location ⇒ 9:123150760-123150710   CU657946,CH242-238G6,9:123128262-123180984
(Clone quality: bE238G6 on chr=9; Num_of_Contigs=3; )
IL10RA location ⇒ 9:86715194-86715137   CU855672,CH242-67M19,9:86645212-86777014
(Clone quality: bE67M19 on chr=9; Num_of_Contigs=3; )
IL11 ENSSSCG00000003293 6:41340816-41342672   FP245423,CH242-507H20,6:41340719-41344988
(Clone quality: bE507H20 on chr=6; Num_of_Contigs=16; )
IL11 ENSSSCG00000007684 3:8137632-8166975    
IL11RA ENSSSCG00000010968 10:30583162-30591642   CU928717,CH242-142N10,10:30573702-30613538
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
IL11RA location ⇒ 10:30583638-30583410   CU928717,CH242-142N10,10:30573702-30613538
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
IL11RA location ⇒ 10:30587475-30587309   CU928717,CH242-142N10,10:30573702-30613538
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
IL11RA location ⇒ 10:30588286-30588118   CU928717,CH242-142N10,10:30573702-30613538
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
IL11RA location ⇒ 10:30588947-30588777   CU928717,CH242-142N10,10:30573702-30613538
(Clone quality: bE142N10 on chr=10; Num_of_Contigs=7; )
IL12A ENSSSCG00000011730 13:78412462-78420147   CU466518,CH242-80G23,13:78393559-78436172
(Clone quality: bE80G23 on chr=13; Num_of_Contigs=6; )
IL12A location ⇒ 13:78412462-78412684   CU466518,CH242-80G23,13:78393559-78436172
(Clone quality: bE80G23 on chr=13; Num_of_Contigs=6; )
IL12A location ⇒ 13:78413297-78413452   CU466518,CH242-80G23,13:78393559-78436172
(Clone quality: bE80G23 on chr=13; Num_of_Contigs=6; )
IL12A location ⇒ 13:78417801-78417945   CU466518,CH242-80G23,13:78393559-78436172
(Clone quality: bE80G23 on chr=13; Num_of_Contigs=6; )
IL12A location ⇒ 13:78419442-78419997   CU466518,CH242-80G23,13:78393559-78436172
(Clone quality: bE80G23 on chr=13; Num_of_Contigs=6; )
IL12B ENSSSCG00000017044 16:62019783-62031573   CU570833,CH242-250F18,16:62019299-62033781
(Clone quality: bE250F18 on chr=16; Num_of_Contigs=7; )
IL12B location ⇒ 16:61829169-61829221   CU466479,CH242-412N7,16:61818451-61830949
(Clone quality: bE412N7 on chr=16; Num_of_Contigs=8; )
IL12B location ⇒ 16:62020559-62019783   CU570833,CH242-250F18,16:62019299-62033781
(Clone quality: bE250F18 on chr=16; Num_of_Contigs=7; )
IL12B location ⇒ 16:62020845-62020621   CU570833,CH242-250F18,16:62019299-62033781
(Clone quality: bE250F18 on chr=16; Num_of_Contigs=7; )
IL12B location ⇒ 16:62027409-62027133   CU570833,CH242-250F18,16:62019299-62033781
(Clone quality: bE250F18 on chr=16; Num_of_Contigs=7; )
IL12RB1 ENSSSCG00000013894 2:62275046-62303074    
IL12RB1 location ⇒ 2:62275732-62275535   CU463003,CH242-317A24,2:62151810-62279750
(Clone quality: bE317A24 on chr=2; Num_of_Contigs=2; )
IL12RB1 location ⇒ 2:62299106-62298936   CU915655,CH242-228H4,2:62290096-62303615
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
IL12RB1 location ⇒ 2:62300104-62299985   CU915655,CH242-228H4,2:62290096-62303615
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
IL12RB1 location ⇒ 2:62420198-62420341    
IL12RB2 ENSSSCG00000003799 6:102222763-102288351    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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