A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
HMX2   ENSSSCG00000010725 14:139141434-139143194   CU468341,CH242-268H7,14:139020351-139163532
(Clone quality: bE268H7 on chr=14; Num_of_Contigs=2; )
HMX3   ENSSSCG00000010724 14:139129335-139131031   CU468341,CH242-268H7,14:139020351-139163532
(Clone quality: bE268H7 on chr=14; Num_of_Contigs=2; )
HN1   ENSSSCG00000017213 12:4320628-4339131 CU928896,CH242-521B23,12:4294467-4388657
(Clone quality: bE521B23 on chr=12; Num_of_Contigs=4; ) 		 
HN1L   ENSSSCG00000008019 3:35975998-36184226    
HNF1A ENSSSCG00000009919 14:41030504-41050007   CU467935,CH242-88C19,14:41029822-41073842
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
HNF4A ENSSSCG00000007371 17:48531166-48638597    
HNF4A location ⇒ 17:48535020-48535195   CU062400,CH242-57M16,17:48528960-48541313
(Clone quality: bE57M16 on chr=17; Num_of_Contigs=4; )
HNF4A location ⇒ 17:48632882-48633122   CU062400,CH242-57M16,17:48625476-48654900
(Clone quality: bE57M16 on chr=17; Num_of_Contigs=4; )
HNF4A location ⇒ 17:48638144-48638556   CU062400,CH242-57M16,17:48625476-48654900
(Clone quality: bE57M16 on chr=17; Num_of_Contigs=4; )
HNF4A location ⇒ 17:48759882-48760057   CU469279,CH242-97E9,17:48751019-48765009
(Clone quality: bE97E9 on chr=17; Num_of_Contigs=17; )
HNF4G   ENSSSCG00000006170 4:62666409-62692540   CU222532,CH242-451L13,4:62631976-62801878
(Clone quality: bE451L13 on chr=4; Num_of_Contigs=1; )
HNK-1 ENSSSCG00000015259 9:59287480-59384534    
HNK-1 ENSSSCG00000008175 3:49597731-49631933   CU407314,CH242-21N16,3:49539268-49635275
(Clone quality: bE21N16 on chr=3; Num_of_Contigs=6; )
HNRNPA0   ENSSSCG00000014322 2:126851044-126851952   CU468422,CH242-383D3,2:126837983-126936701
(Clone quality: bE383D3 on chr=2; Num_of_Contigs=4; )
HNRNPA1   ENSSSCG00000000288 5:17966352-17970679    
HNRNPA2B1 ENSSSCG00000015836 15:49647326-49648387   CU469303,CH242-431P21,15:49634697-49651792
(Clone quality: bE431P21 on chr=15; Num_of_Contigs=12; )
HNRNPA2B1 location ⇒ 15:125590277-125590428   CU466365,CH242-117P4,15:125576848-125596148
(Clone quality: bE117P4 on chr=15; Num_of_Contigs=11; )
HNRNPA2B1 location ⇒ 15:49647366-49648483   CU469303,CH242-431P21,15:49634697-49651792
(Clone quality: bE431P21 on chr=15; Num_of_Contigs=12; )
HNRNPA2B1 location ⇒ 15:49648482-49648815   CU469303,CH242-431P21,15:49634697-49651792
(Clone quality: bE431P21 on chr=15; Num_of_Contigs=12; )
HNRNPA3 location ⇒ 15:77800018-77797772   CU862048,CH242-277M15,15:77792475-77800018
(Clone quality: bE277M15 on chr=15; Num_of_Contigs=5; )
HNRNPA3 location ⇒ 15:77800739-77800130   CU862048,CH242-277M15,15:77800119-77816999
(Clone quality: bE277M15 on chr=15; Num_of_Contigs=5; )
HNRNPA3 location ⇒ 15:78014493-78014693    
HNRNPA3 location ⇒ 15:78178262-78176994   CU914511,CH242-315O20,15:78170080-78178318
(Clone quality: bE315O20 on chr=15; Num_of_Contigs=7; )
HNRNPAB   ENSSSCG00000001932 7:66465394-66475264    
HNRNPD   ENSSSCG00000009249 8:116910628-116915701   CU627987,CH242-513A9,8:116910624-116925800
(Clone quality: bE513A9 on chr=8; Num_of_Contigs=28; )
HNRNPF   ENSSSCG00000010203 14:64028798-64030042   CU468599,CH242-233N12,14:63941120-64035179
(Clone quality: bE233N12 on chr=14; Num_of_Contigs=4; )
HNRNPH1   ENSSSCG00000014022 2:68306318-68315733   CU915704,CH242-394M22,2:68275757-68351064
(Clone quality: bE394M22 on chr=2; Num_of_Contigs=5; )
HNRNPH3   ENSSSCG00000010238 14:74509863-74521076   CU468421,CH242-379L15,14:74494034-74531747
(Clone quality: bE379L15 on chr=14; Num_of_Contigs=10; )
HNRNPM   ENSSSCG00000013602 2:51715849-51760926   FP090904,CH242-212F1,2:51700191-51798128
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
HNRNPU   ENSSSCG00000010877 10:17021417-17031556    
HNRNPUL2 location ⇒ 3:114056580-114056506   CU928236,CH242-257C7,3:114031547-114080958
(Clone quality: bE257C7 on chr=3; Num_of_Contigs=5; )
HNRNPUL2 location ⇒ 3:114224493-114224419   CU606881,CH242-502K17,3:114199461-114262585
(Clone quality: bE502K17 on chr=3; Num_of_Contigs=4; )
HNRPA1 location ⇒ 13:131006343-131007004   CU655885,CH242-100J1,13:131006063-131017975
(Clone quality: bE100J1 on chr=13; Num_of_Contigs=23; )
HNRPA1 location ⇒ 13:131007081-131007299   CU655885,CH242-100J1,13:131006063-131017975
(Clone quality: bE100J1 on chr=13; Num_of_Contigs=23; )
HNRPA1 location ⇒ 13:131056903-131056685   CU606918,CH242-163L22,13:131033125-131059859
(Clone quality: bE163L22 on chr=13; Num_of_Contigs=12; )
HNRPA1 location ⇒ 13:131057641-131056980   CU606918,CH242-163L22,13:131033125-131059859
(Clone quality: bE163L22 on chr=13; Num_of_Contigs=12; )
HNRPDL   ENSSSCG00000009247 8:116864757-116869761    
HNRPK location ⇒ 14:68423135-68422374   CT827838,CH242-237N24,14:68331845-68475796
(Clone quality: bE237N24 on chr=14; Num_of_Contigs=2; )
HNRPK location ⇒ 14:68423297-68423224   CT827838,CH242-237N24,14:68331845-68475796
(Clone quality: bE237N24 on chr=14; Num_of_Contigs=2; )
HNRPK location ⇒ 14:68425130-68423385   CT827838,CH242-237N24,14:68331845-68475796
(Clone quality: bE237N24 on chr=14; Num_of_Contigs=2; )
HNRPLL location ⇒ 3:94964757-94964886   CU929798,CH242-422N20,3:94964676-94982053
(Clone quality: bE422N20 on chr=3; Num_of_Contigs=6; )
HNRPM ENSSSCG00000013602 2:51715849-51760926   FP090904,CH242-212F1,2:51700191-51798128
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
HNRPM location ⇒ 2:51757937-51757519   FP090904,CH242-212F1,2:51700191-51798128
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
HNRPM location ⇒ 2:51758873-51758821   FP090904,CH242-212F1,2:51700191-51798128
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
HNRPM location ⇒ 2:51760921-51760503   FP090904,CH242-212F1,2:51700191-51798128
(Clone quality: bE212F1 on chr=2; Num_of_Contigs=2; )
HNRPUL1 location ⇒ 15:45551554-45551530   CU571183,CH242-123D14,15:45542048-45574014
(Clone quality: bE123D14 on chr=15; Num_of_Contigs=2; )
HNT ENSSSCG00000001021 7:4546794-4605878   CU469365,CH242-149A19,7:4528264-4656133
(Clone quality: bE149A19 on chr=7; Num_of_Contigs=3; )
HNT ENSSSCG00000015253 9:56900918-57299557    
HNT location ⇒ 9:57101451-57101216   CU694882,CH242-317C10,9:57094426-57111122
(Clone quality: bE317C10 on chr=9; Num_of_Contigs=7; )
HNT location ⇒ 9:57171527-57171400   CU694882,CH242-317C10,9:57169277-57188104
(Clone quality: bE317C10 on chr=9; Num_of_Contigs=7; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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