A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IGSF2 location ⇒ 4:131031690-131031609   CU468656,CH242-236G16,4:131019228-131034713
(Clone quality: bE236G16 on chr=4; Num_of_Contigs=18; )
IGSF2 location ⇒ 4:80325578-80325482   CU179651,CH242-238A10,4:80286315-80339472
(Clone quality: bE238A10 on chr=4; Num_of_Contigs=3; )
IGSF2 location ⇒ 4:85997047-85997147 CU151849,CH242-198O5,4:85931827-86135389
(Clone quality: bE198O5 on chr=4; Num_of_Contigs=5; ) 		 
IGSF22 ENSSSCG00000013359 2:37700196-37714759   CU915335,CH242-299H5,2:37673371-37742014
(Clone quality: bE299H5 on chr=2; Num_of_Contigs=5; )
IGSF22 location ⇒ 2:37715123-37714635   CU915335,CH242-299H5,2:37673371-37742014
(Clone quality: bE299H5 on chr=2; Num_of_Contigs=5; )
IGSF4 location ⇒ 9:41330604-41330444   CU915713,CH242-2P16,9:41329108-41333760
(Clone quality: bE2P16 on chr=9; Num_of_Contigs=7; )
IGSF4 location ⇒ 9:41373169-41372997   CU915713,CH242-2P16,9:41369179-41387893
(Clone quality: bE2P16 on chr=9; Num_of_Contigs=7; )
IGSF4 location ⇒ 9:41450538-41450378   CU571118,CH242-229F5,9:41439303-41478747
(Clone quality: bE229F5 on chr=9; Num_of_Contigs=4; )
IGSF4 location ⇒ 9:41597506-41597334   CU571118,CH242-229F5,9:41547760-41603997
(Clone quality: bE229F5 on chr=9; Num_of_Contigs=4; )
IGSF4B location ⇒ 4:94756891-94757060   CU856458,CH242-123O3,4:94701871-94759399
(Clone quality: bE123O3 on chr=4; Num_of_Contigs=6; )
IGSF4B location ⇒ 4:94782895-94782728   CU462834,CH242-199I10,4:94761474-94795889
(Clone quality: bE199I10 on chr=4; Num_of_Contigs=5; )
IGSF4B location ⇒ 4:94783936-94783809   CU462834,CH242-199I10,4:94761474-94795889
(Clone quality: bE199I10 on chr=4; Num_of_Contigs=5; )
IGSF4B location ⇒ 4:94787297-94787128   CU462834,CH242-199I10,4:94761474-94795889
(Clone quality: bE199I10 on chr=4; Num_of_Contigs=5; )
IGSF4C ENSSSCG00000003061 6:34964060-34967939    
IGSF4C location ⇒ 6:34966334-34966243   FP102604,CH242-184P4,6:34931170-34967938
(No clone quality info on )
IGSF4C location ⇒ 6:34966588-34966422   FP102604,CH242-184P4,6:34931170-34967938
(No clone quality info on )
IGSF4C location ⇒ 6:34967133-34966997   FP102604,CH242-184P4,6:34931170-34967938
(No clone quality info on )
IGSF4C location ⇒ 6:34967574-34967421   FP102604,CH242-184P4,6:34931170-34967938
(No clone quality info on )
IGSF4D ENSSSCG00000011999 13:123897257-123966866    
IGSF4D location ⇒ 13:123868983-123869427   CU466504,CH242-513J18,13:123847706-123880705
(Clone quality: bE513J18 on chr=13; Num_of_Contigs=6; )
IGSF4D location ⇒ 13:123869665-123871111   CU466504,CH242-513J18,13:123847706-123880705
(Clone quality: bE513J18 on chr=13; Num_of_Contigs=6; )
IGSF4D location ⇒ 13:123897434-123897256   CU466504,CH242-513J18,13:123895619-123937998
(Clone quality: bE513J18 on chr=13; Num_of_Contigs=6; )
IGSF4D location ⇒ 13:124064268-124064211   CU862028,CH242-141G9,13:124013958-124079357
(Clone quality: bE141G9 on chr=13; Num_of_Contigs=7; )
IGSF5 ENSSSCG00000012071 13:143316350-143359749    
IGSF8 ENSSSCG00000006392 4:93840441-93848088 CU138477,CH242-105O19,4:93708821-93889364
(Clone quality: bE105O19 on chr=4; Num_of_Contigs=5; ) 		 
IGSF9 ENSSSCG00000006396 4:93959082-93963133   CU856127,CH242-86L20,4:93957645-93963134
(Clone quality: bE86L20 on chr=4; Num_of_Contigs=6; )
IGSF9 location ⇒ 4:93959538-93959480   CU856127,CH242-86L20,4:93957645-93963134
(Clone quality: bE86L20 on chr=4; Num_of_Contigs=6; )
IGSF9 location ⇒ 4:93959878-93959725   CU856127,CH242-86L20,4:93957645-93963134
(Clone quality: bE86L20 on chr=4; Num_of_Contigs=6; )
IGSF9 location ⇒ 4:93960392-93960121   CU856127,CH242-86L20,4:93957645-93963134
(Clone quality: bE86L20 on chr=4; Num_of_Contigs=6; )
IGSF9B   ENSSSCG00000015255 9:58909857-58933293    
IHH ENSSSCG00000016204 15:114075541-114081145    
IK ENSSSCG00000014372 2:129369359-129384742    
IK ENSSSCG00000013440 2:46750854-46771652    
IK location ⇒ 2:129381207-129381126   CU459055,CH242-430O11,2:129351567-129383244
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
IK location ⇒ 2:129383958-129383866   CU459055,CH242-430O11,2:129383345-129419222
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
IK location ⇒ 2:129384265-129384157   CU459055,CH242-430O11,2:129383345-129419222
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
IK location ⇒ 2:129384737-129384548   CU459055,CH242-430O11,2:129383345-129419222
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
IKBIP   ENSSSCG00000000885 5:80776802-80787906    
IKBKAP ENSSSCG00000005441 1:262665218-262734412   CU442740,CH242-321N10,1:262654894-262770561
(Clone quality: bE321N10 on chr=1; Num_of_Contigs=3; )
IKBKAP location ⇒ 1:262725053-262724940   CU442740,CH242-321N10,1:262654894-262770561
(Clone quality: bE321N10 on chr=1; Num_of_Contigs=3; )
IKBKAP location ⇒ 1:262726276-262726149   CU442740,CH242-321N10,1:262654894-262770561
(Clone quality: bE321N10 on chr=1; Num_of_Contigs=3; )
IKBKAP location ⇒ 1:262726880-262726722   CU442740,CH242-321N10,1:262654894-262770561
(Clone quality: bE321N10 on chr=1; Num_of_Contigs=3; )
IKBKAP location ⇒ 1:262734412-262734099   CU442740,CH242-321N10,1:262654894-262770561
(Clone quality: bE321N10 on chr=1; Num_of_Contigs=3; )
IKBKB ENSSSCG00000005934 4:1712609-2190793    
IKBKB ENSSSCG00000007030 17:11797066-11835121    
IKBKB location ⇒ 17:11719851-11720046   CU607029,CH242-261P4,17:11719259-11743514
(Clone quality: bE261P4 on chr=17; Num_of_Contigs=18; )
IKBKB location ⇒ 17:11735944-11736775   CU607029,CH242-261P4,17:11719259-11743514
(Clone quality: bE261P4 on chr=17; Num_of_Contigs=18; )
IKBKB location ⇒ 17:11818726-11818922   CU855981,CH242-160M5,17:11806062-11834651
(Clone quality: bE160M5 on chr=17; Num_of_Contigs=14; )
IKBKB location ⇒ 17:11835057-11835883   CU855981,CH242-160M5,17:11834752-11837098
(Clone quality: bE160M5 on chr=17; Num_of_Contigs=14; )
IKBKE ENSSSCG00000015644 9:131386922-131411394    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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