A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
ORC3L   ENSSSCG00000004306 1:58693786-58759707    
ORC4L   ENSSSCG00000015668 15:820509-896219    
ORC5L   ENSSSCG00000015427 9:97235888-97487470    
ORM1 ENSSSCG00000000365 5:20213711-20216204 CU606916,CH242-141C7,5:20096881-20252808
(Clone quality: bE141C7 on chr=5; Num_of_Contigs=1; ) 		 
ORM1 ENSSSCG00000005488 1:267972609-267976425   CU618340,CH242-69F8,1:267954596-267995696
(Clone quality: bE69F8 on chr=1; Num_of_Contigs=5; )
ORM1 ENSSSCG00000016044 15:88891197-88907738    
ORM1 ENSSSCG00000017492 12:20373961-20379357   CU928026,CH242-256H23,12:20355016-20420520
(Clone quality: bE256H23 on chr=12; Num_of_Contigs=2; )
ORM1 location ⇒ 1:267972632-267972779   CU618340,CH242-69F8,1:267954596-267995696
(Clone quality: bE69F8 on chr=1; Num_of_Contigs=5; )
ORM1 location ⇒ 1:267973133-267973276   CU618340,CH242-69F8,1:267954596-267995696
(Clone quality: bE69F8 on chr=1; Num_of_Contigs=5; )
ORM1 location ⇒ 1:267974664-267974772   CU618340,CH242-69F8,1:267954596-267995696
(Clone quality: bE69F8 on chr=1; Num_of_Contigs=5; )
ORM1 location ⇒ 1:267976300-267976423   CU618340,CH242-69F8,1:267954596-267995696
(Clone quality: bE69F8 on chr=1; Num_of_Contigs=5; )
ORMDL-1 location ⇒ 10:32034700-32034171   CU929631,CH242-359M22,10:32001620-32051144
(Clone quality: bE359M22 on chr=10; Num_of_Contigs=3; )
ORMDL-1 location ⇒ 10:32185801-32185272   CU856663,CH242-345J13,10:32143390-32209156
(Clone quality: bE345J13 on chr=10; Num_of_Contigs=3; )
ORMDL-2 location ⇒ 6:31733725-31734523   FP236141,CH242-262N14,6:31728767-31739417
(Clone quality: bE262N14 on chr=6; Num_of_Contigs=6; )
ORMDL1 ENSSSCG00000016044 15:88891197-88907738    
ORMDL2 ENSSSCG00000000365 5:20213711-20216204 CU606916,CH242-141C7,5:20096881-20252808
(Clone quality: bE141C7 on chr=5; Num_of_Contigs=1; ) 		 
OS9   ENSSSCG00000000452 5:21979299-22007996    
OSBP   ENSSSCG00000013125 2:9892169-9925521    
OSBP2   ENSSSCG00000010015 14:48418210-48543952   CT737371,CH242-94O19,14:48409585-48588989
(Clone quality: bE94O19 on chr=14; Num_of_Contigs=1; )
OSBPL10   ENSSSCG00000011230 13:15602776-15693748    
OSBPL1A   ENSSSCG00000003712 6:74373070-74704150    
OSBPL3   ENSSSCG00000016715 18:46247140-46379899    
OSBPL5   ENSSSCG00000012862 2:588356-618322   FP102499,CH242-363D24,2:585774-638903
(Clone quality: bE363D24 on chr=2; Num_of_Contigs=11; )
OSBPL7   ENSSSCG00000017518 12:21575415-21584535   CU655852,CH242-166I5,12:21573723-21615705
(Clone quality: bE166I5 on chr=12; Num_of_Contigs=13; )
OSBPL8   ENSSSCG00000000524 5:39537751-39553785    
OSCAR ENSSSCG00000003259 6:40470733-40533126    
OSGEP   ENSSSCG00000002138 7:84892936-84900518   CT955972,CH242-231D20,7:84860540-84904248
(Clone quality: bE231D20 on chr=7; Num_of_Contigs=1; )
OSGEPL1   ENSSSCG00000016043 15:88867098-88881914    
OSM ENSSSCG00000009997 14:48017985-48020973 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; ) 		 
OSM ENSSSCG00000016470 18:6112105-6120110   CU928245,CH242-100K20,18:6102984-6180022
(Clone quality: bE100K20 on chr=18; Num_of_Contigs=3; )
OSM ENSSSCG00000018032 12:56177051-56192414    
OSM location ⇒ 14:48018532-48018121 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; ) 		 
OSM location ⇒ 14:48028135-48027915 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; ) 		 
OSMR ENSSSCG00000016851 16:21458290-21503302   CU571007,CH242-14A4,16:21456383-21539523
(Clone quality: bE14A4 on chr=16; Num_of_Contigs=3; )
OSMR location ⇒ 16:21469241-21469514   CU571007,CH242-14A4,16:21456383-21539523
(Clone quality: bE14A4 on chr=16; Num_of_Contigs=3; )
OSMR location ⇒ 16:21470607-21470797   CU571007,CH242-14A4,16:21456383-21539523
(Clone quality: bE14A4 on chr=16; Num_of_Contigs=3; )
OSMR location ⇒ 16:21477144-21477269   CU571007,CH242-14A4,16:21456383-21539523
(Clone quality: bE14A4 on chr=16; Num_of_Contigs=3; )
OSR2   ENSSSCG00000006073 4:37954607-37957374   CU138496,CH242-64A21,4:37945952-38008536
(Clone quality: bE64A21 on chr=4; Num_of_Contigs=14; )
Osta   ENSSSCG00000011846 13:100654039-100672024 CU695181,CH242-182C12,13:100594044-100802412
(Clone quality: bE182C12 on chr=13; Num_of_Contigs=21; ) 		 
OSTC   ENSSSCG00000009145 8:97440140-97451351   CU463349,CH242-219F15,8:97430864-97459105
(Clone quality: bE219F15 on chr=8; Num_of_Contigs=4; )
OSTEOCALCIN ENSSSCG00000006492 4:97711489-97711806   CU468654,CH242-228K10,4:97649767-97712830
(Clone quality: bE228K10 on chr=4; Num_of_Contigs=7; )
OSTEOCALCIN location ⇒ 4:97711614-97711351   CU468654,CH242-228K10,4:97649767-97712830
(Clone quality: bE228K10 on chr=4; Num_of_Contigs=7; )
OSTF1 ENSSSCG00000005273 1:238617455-238672329   CU633596,CH242-504A9,1:238614969-238675171
(Clone quality: bE504A9 on chr=1; Num_of_Contigs=3; )
OSTF1 location ⇒ 8:90789575-90790435   CU570724,CH242-203K14,8:90680257-90831171
(Clone quality: bE203K14 on chr=8; Num_of_Contigs=1; )
OSTM1   ENSSSCG00000004383 1:77721582-77761300 CU207397,CH242-240D13,1:77563184-77792541
(Clone quality: bE240D13 on chr=1; Num_of_Contigs=11; ) 		 
OSTN   ENSSSCG00000011815 13:96789203-96832766    
OTC   ENSSSCG00000012236 X:33771381-33840748    
OTOA   ENSSSCG00000007838 3:21549198-21591715    
OTOF   ENSSSCG00000008566 3:104969171-105118979    
OTOG ENSSSCG00000013376 2:38783939-38876457    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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