A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IGHG2.02 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IGHG3.01 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IGHG4.01 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IGHG5.01 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IGHMBP2   ENSSSCG00000012878 2:2413783-2436766    
IGJ ENSSSCG00000008939 8:57357800-57366534   CU928399,CH242-512L3,8:57337653-57366952
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
IGJ location ⇒ 8:57358336-57358034   CU928399,CH242-512L3,8:57337653-57366952
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
IGJ location ⇒ 8:57359052-57358972   CU928399,CH242-512L3,8:57337653-57366952
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
IGJ location ⇒ 8:57362988-57362860   CU928399,CH242-512L3,8:57337653-57366952
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
IGJ location ⇒ 8:57366458-57366336   CU928399,CH242-512L3,8:57337653-57366952
(Clone quality: bE512L3 on chr=8; Num_of_Contigs=3; )
IGKV1-1 location ⇒ 3:52348692-52348398   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV1-1 location ⇒ 3:52363526-52363232   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV1-1 location ⇒ 3:52390858-52390581   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV1-1 location ⇒ 3:52399810-52400101   CU694848,CH242-221I5,3:52395354-52408458
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV2-4 location ⇒ 3:52354692-52354443   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV2-4 location ⇒ 3:52372713-52372439   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV2-4 location ⇒ 3:52382451-52382189   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV4-3 location ⇒ 3:52354687-52354443   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV4-3 location ⇒ 3:52372707-52372439   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV4-3 location ⇒ 3:52382446-52382178   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV4-5 location ⇒ 3:52348688-52348401   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV4-5 location ⇒ 3:52363522-52363231   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV4-5 location ⇒ 3:52376276-52376009   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKV4-5 location ⇒ 3:52399814-52400102   CU694848,CH242-221I5,3:52395354-52408458
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKVG502 location ⇒ 3:52348692-52348394   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKVG502 location ⇒ 3:52376286-52376006   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKVG502 location ⇒ 3:52390858-52390557   CU694848,CH242-221I5,3:52292275-52395253
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGKVG502 location ⇒ 3:52399810-52400108   CU694848,CH242-221I5,3:52395354-52408458
(Clone quality: bE221I5 on chr=3; Num_of_Contigs=4; )
IGLL1 location ⇒ 14:49746271-49746326   CU468977,CH242-158O5,14:49653560-49846294
(Clone quality: bE158O5 on chr=14; Num_of_Contigs=1; )
IGLL1 location ⇒ 14:49763350-49763405   CU468977,CH242-158O5,14:49653560-49846294
(Clone quality: bE158O5 on chr=14; Num_of_Contigs=1; )
IGLL1 location ⇒ 14:49791854-49791909   CU468977,CH242-158O5,14:49653560-49846294
(Clone quality: bE158O5 on chr=14; Num_of_Contigs=1; )
IGLL1 location ⇒ 14:49931988-49932440   CU467669,CH242-141B5,14:49929297-49934114
(Clone quality: bE141B5 on chr=14; Num_of_Contigs=7; )
IGLON5   ENSSSCG00000003227 6:39361513-39366924    
IGLV8-61   ENSSSCG00000010038 14:49638071-49638638   CU468665,CH242-288F14,14:49636880-49653559
(Clone quality: bE288F14 on chr=14; Num_of_Contigs=5; )
IgM ENSSSCG00000006455 4:96025067-96042589 CU137732,CH242-59K14,4:95974742-96142492
(Clone quality: bE59K14 on chr=4; Num_of_Contigs=4; ) 		 
IgMh location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IGSF1 ENSSSCG00000012667 X:105641602-105657479 CU480630,CH242-371M9,X:105592796-105667793
(Clone quality: bE371M9 on chr=X; Num_of_Contigs=8; ) 		 
IGSF1 location ⇒ X:105655352-105655488 CU480630,CH242-371M9,X:105592796-105667793
(Clone quality: bE371M9 on chr=X; Num_of_Contigs=8; ) 		 
IGSF1 location ⇒ X:105655682-105655976 CU480630,CH242-371M9,X:105592796-105667793
(Clone quality: bE371M9 on chr=X; Num_of_Contigs=8; ) 		 
IGSF1 location ⇒ X:105656092-105656372 CU480630,CH242-371M9,X:105592796-105667793
(Clone quality: bE371M9 on chr=X; Num_of_Contigs=8; ) 		 
IGSF1 location ⇒ X:105656764-105656889 CU480630,CH242-371M9,X:105592796-105667793
(Clone quality: bE371M9 on chr=X; Num_of_Contigs=8; ) 		 
IGSF10 ENSSSCG00000011717 13:74245367-74296926    
IGSF10 location ⇒ 13:74269470-74269818   CU633665,CH242-229L11,13:74258980-74278647
(Clone quality: bE229L11 on chr=13; Num_of_Contigs=3; )
IGSF11 ENSSSCG00000011906 13:105963273-105991286   CU633693,CH242-275M20,13:105957563-106052670
(Clone quality: bE275M20 on chr=13; Num_of_Contigs=2; )
IGSF11 location ⇒ 13:105965195-105965406   CU633693,CH242-275M20,13:105957563-106052670
(Clone quality: bE275M20 on chr=13; Num_of_Contigs=2; )
IGSF11 location ⇒ 13:105968949-105969107   CU633693,CH242-275M20,13:105957563-106052670
(Clone quality: bE275M20 on chr=13; Num_of_Contigs=2; )
IGSF11 location ⇒ 13:105988001-105988125   CU633693,CH242-275M20,13:105957563-106052670
(Clone quality: bE275M20 on chr=13; Num_of_Contigs=2; )
IGSF11 location ⇒ 13:105989009-105989070   CU633693,CH242-275M20,13:105957563-106052670
(Clone quality: bE275M20 on chr=13; Num_of_Contigs=2; )
IGSF2 ENSSSCG00000006734 4:107816226-107847307   CU468873,CH242-284J24,4:107815328-107859077
(Clone quality: bE284J24 on chr=4; Num_of_Contigs=15; )
IGSF2 location ⇒ 4:130954269-130954350   CU856023,CH242-267I1,4:130816390-130991011
(Clone quality: bE267I1 on chr=4; Num_of_Contigs=1; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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