A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
FAM3B ENSSSCG00000012075 13:144302908-144350935    
FAM3B location ⇒ 13:144319279-144319153   CU467746,CH242-382J7,13:144254756-144329213
(Clone quality: bE382J7 on chr=13; Num_of_Contigs=7; )
FAM3B location ⇒ 13:144343740-144343650   CU467746,CH242-382J7,13:144331903-144351073
(Clone quality: bE382J7 on chr=13; Num_of_Contigs=7; )
FAM3B location ⇒ 13:144345094-144344959   CU467746,CH242-382J7,13:144331903-144351073
(Clone quality: bE382J7 on chr=13; Num_of_Contigs=7; )
FAM3B location ⇒ 13:144350928-144350804   CU467746,CH242-382J7,13:144331903-144351073
(Clone quality: bE382J7 on chr=13; Num_of_Contigs=7; )
FAM3C   ENSSSCG00000016616 18:23727543-23768384    
FAM3D ENSSSCG00000011479 13:34005962-34009224   CU927912,CH242-524I3,13:33987548-34009826
(Clone quality: bE524I3 on chr=13; Num_of_Contigs=9; )
FAM3D location ⇒ 13:34006394-34005937   CU927912,CH242-524I3,13:33987548-34009826
(Clone quality: bE524I3 on chr=13; Num_of_Contigs=9; )
FAM3D location ⇒ 13:34009222-34009096   CU927912,CH242-524I3,13:33987548-34009826
(Clone quality: bE524I3 on chr=13; Num_of_Contigs=9; )
FAM40A   ENSSSCG00000006813 4:114502450-114521527    
FAM40B   ENSSSCG00000016567 18:17369997-17414485    
FAM43A   ENSSSCG00000011828 13:99303945-99305219   CU582784,CH242-39K20,13:99286999-99359105
(Clone quality: bE39K20 on chr=13; Num_of_Contigs=5; )
FAM45A   ENSSSCG00000010680 14:135010030-135030442   CU407047,CH242-224G2,14:135009454-135041998
(Clone quality: bE224G2 on chr=14; Num_of_Contigs=3; )
FAM46A   ENSSSCG00000004464 1:89348203-89351200   CU074287,CH242-128M14,1:89222291-89387848
(Clone quality: bE128M14 on chr=1; Num_of_Contigs=1; )
FAM46B   ENSSSCG00000003568 6:57972912-57979262   FP015947,CH242-485K18,6:57822585-57995160
(Clone quality: bE485K18 on chr=6; Num_of_Contigs=2; )
FAM46C ENSSSCG00000006729 4:107199247-107200422   CU469418,CH242-264L10,4:107154030-107294999
(Clone quality: bE264L10 on chr=4; Num_of_Contigs=1; )
FAM46C location ⇒ 4:107197136-107197063   CU469418,CH242-264L10,4:107154030-107294999
(Clone quality: bE264L10 on chr=4; Num_of_Contigs=1; )
FAM46C location ⇒ 4:107198524-107198471   CU469418,CH242-264L10,4:107154030-107294999
(Clone quality: bE264L10 on chr=4; Num_of_Contigs=1; )
FAM46C location ⇒ 4:107200425-107199127   CU469418,CH242-264L10,4:107154030-107294999
(Clone quality: bE264L10 on chr=4; Num_of_Contigs=1; )
FAM46C location ⇒ 4:107217174-107217030   CU469418,CH242-264L10,4:107154030-107294999
(Clone quality: bE264L10 on chr=4; Num_of_Contigs=1; )
FAM46D   ENSSSCG00000012450 X:63911290-63912462   CU640465,CH242-281N9,X:63864813-63913630
(Clone quality: bE281N9 on chr=X; Num_of_Contigs=4; )
FAM47E   ENSSSCG00000008981 8:61375404-61399884    
FAM48A   ENSSSCG00000009359 11:12222467-12450919    
FAM49A   ENSSSCG00000008617 3:112213793-112312875   CU607028,CH242-22J2,3:112202237-112384814
(Clone quality: bE22J2 on chr=3; Num_of_Contigs=1; )
FAM49B   ENSSSCG00000005959 4:9674673-9769367    
FAM53B   ENSSSCG00000010732 14:140635828-140956680    
FAM53C   ENSSSCG00000014330 2:127307949-127317552   CU928408,CH242-232M5,2:127227830-127327871
(Clone quality: bE232M5 on chr=2; Num_of_Contigs=3; )
FAM54A   ENSSSCG00000004164 1:29321297-29339178    
FAM55C   ENSSSCG00000011950 13:115468295-115506129   CU928516,CH242-187M6,13:115452264-115554502
(Clone quality: bE187M6 on chr=13; Num_of_Contigs=9; )
FAM55D   ENSSSCG00000015059 9:40874199-40878303   CU856090,CH242-161C5,9:40863505-40883521
(Clone quality: bE161C5 on chr=9; Num_of_Contigs=4; )
FAM57A ENSSSCG00000017810 12:45031168-45038190   CU928997,CH242-26C19,12:45029631-45038207
(Clone quality: bE26C19 on chr=12; Num_of_Contigs=2; )
FAM57A location ⇒ 12:45031528-45031287   CU928997,CH242-26C19,12:45029631-45038207
(Clone quality: bE26C19 on chr=12; Num_of_Contigs=2; )
FAM57A location ⇒ 12:45032068-45031970   CU928997,CH242-26C19,12:45029631-45038207
(Clone quality: bE26C19 on chr=12; Num_of_Contigs=2; )
FAM58A   ENSSSCG00000012770 X:122434759-122441215   FP102397,CH242-79A9,X:122391234-122447282
(Clone quality: bE79A9 on chr=X; Num_of_Contigs=14; )
FAM59A   ENSSSCG00000003731 6:80352006-80801273    
FAM59B   ENSSSCG00000008572 3:105344795-105361542   CU571288,CH242-32P1,3:105305392-105483350
(Clone quality: bE32P1 on chr=3; Num_of_Contigs=1; )
FAM5B   ENSSSCG00000015515 9:112056451-112107071    
FAM5C   ENSSSCG00000010809 10:3488327-3823194    
FAM63A   ENSSSCG00000006642 4:102179188-102186739   CU459198,CH242-258B14,4:102166486-102207236
(Clone quality: bE258B14 on chr=4; Num_of_Contigs=7; )
FAM63B   ENSSSCG00000004593 1:117268210-117269082   CU606929,CH242-39M13,1:117261954-117269099
(Clone quality: bE39M13 on chr=1; Num_of_Contigs=15; )
FAM64A   ENSSSCG00000017893 12:48150642-48155356   CU655874,CH242-486F6,12:48094305-48297765
(Clone quality: bE486F6 on chr=12; Num_of_Contigs=2; )
FAM65A   ENSSSCG00000002774 6:13033340-13042815   CU929737,CH242-250E5,6:13019812-13056043
(Clone quality: bE250E5 on chr=6; Num_of_Contigs=3; )
FAM65B   ENSSSCG00000001097 7:20647367-20873629    
FAM69A   ENSSSCG00000006900 4:128569280-128579565   CU305735,CH242-328B14,4:128554973-128604226
(Clone quality: bE328B14 on chr=4; Num_of_Contigs=9; )
FAM69B   ENSSSCG00000005837 1:294211016-294215607   FP236151,CH242-517G10,1:294209779-294217091
(Clone quality: bE517G10 on chr=1; Num_of_Contigs=14; )
FAM70A   ENSSSCG00000012607 X:95938241-95985169    
FAM70B   ENSSSCG00000009564 11:79084257-79101106    
FAM71A   ENSSSCG00000015596 9:123287626-123289413   CU928715,CH242-114L21,9:123287017-123296628
(Clone quality: bE114L21 on chr=9; Num_of_Contigs=13; )
FAM71B   ENSSSCG00000017057 16:63780694-63783883   CU972395,CH242-203E2,16:63774727-63794404
(Clone quality: bE203E2 on chr=16; Num_of_Contigs=4; )
FAM71E1   ENSSSCG00000003219 6:39072288-39077979   FP102476,CH242-133P5,6:39060907-39089695
(Clone quality: bE133P5 on chr=6; Num_of_Contigs=12; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-22

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team