A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
HERC4   ENSSSCG00000010236 14:74307561-74411966    
HERC5   ENSSSCG00000009210 8:112146916-112162051   FP015981,CH242-34G15,8:112134360-112168622
(Clone quality: bE34G15 on chr=8; Num_of_Contigs=3; )
HES1 ENSSSCG00000009470 11:48037456-48040828   CU457401,CH242-185J22,11:48004963-48075214
(Clone quality: bE185J22 on chr=11; Num_of_Contigs=2; )
HES3   ENSSSCG00000003370 6:45431759-45439823   FP102454,CH242-79J15,6:45387357-45440384
(Clone quality: bE79J15 on chr=6; Num_of_Contigs=7; )
HES6   ENSSSCG00000016342 15:130610530-130610928    
HES7   ENSSSCG00000017982 12:50561623-50563852    
HEVIN ENSSSCG00000009222 8:112884827-112929202    
HEVIN location ⇒ 8:112914798-112914955   CU627975,CH242-146A20,8:112911992-112922347
(Clone quality: bE146A20 on chr=8; Num_of_Contigs=6; )
HEVIN location ⇒ 8:112922307-112922455    
HEVIN location ⇒ 8:112923455-112923603   CU463944,CH242-280I20,8:112922348-112927388
(Clone quality: bE280I20 on chr=8; Num_of_Contigs=5; )
HEVIN location ⇒ 8:112928747-112929067   CU463944,CH242-280I20,8:112927489-112931023
(Clone quality: bE280I20 on chr=8; Num_of_Contigs=5; )
HEXA ENSSSCG00000001927 7:66245515-66278567   CU012037,CH242-278H13,7:66223250-66298025
(Clone quality: bE278H13 on chr=7; Num_of_Contigs=4; )
HEXA location ⇒ 7:66245548-66245809   CU012037,CH242-278H13,7:66223250-66298025
(Clone quality: bE278H13 on chr=7; Num_of_Contigs=4; )
HEXA location ⇒ 7:66273719-66273902   CU012037,CH242-278H13,7:66223250-66298025
(Clone quality: bE278H13 on chr=7; Num_of_Contigs=4; )
HEXA location ⇒ 7:66275956-66276142   CU012037,CH242-278H13,7:66223250-66298025
(Clone quality: bE278H13 on chr=7; Num_of_Contigs=4; )
HEXA location ⇒ 7:66278339-66278557   CU012037,CH242-278H13,7:66223250-66298025
(Clone quality: bE278H13 on chr=7; Num_of_Contigs=4; )
HEXB   ENSSSCG00000014073 2:72677073-72716900    
HEXDC   ENSSSCG00000017128 12:105355-116956 FP085448,CH242-272C22,12:90508-118135
(Clone quality: bE272C22 on chr=12; Num_of_Contigs=8; ) 		 
HEXIM1   ENSSSCG00000017336 12:16133855-16134901   FP067380,CH242-32K16,12:15988019-16156790
(Clone quality: bE32K16 on chr=12; Num_of_Contigs=1; )
HEXIM2   ENSSSCG00000017335 12:16118074-16123694   FP067380,CH242-32K16,12:15988019-16156790
(Clone quality: bE32K16 on chr=12; Num_of_Contigs=1; )
HEY1   ENSSSCG00000006159 4:58931803-58934647   CU151844,CH242-179G3,4:58886071-59001941
(Clone quality: bE179G3 on chr=4; Num_of_Contigs=3; )
HEY2   ENSSSCG00000004223 1:38804053-38814049   CU464159,CH242-391N8,1:38798337-38838615
(Clone quality: bE391N8 on chr=1; Num_of_Contigs=9; )
HEYL   ENSSSCG00000003661 6:65521075-65535489 CR956427,CH242-51O7,6:65474974-65651225
(No clone quality info on bE51O7) 		 
HFE ENSSSCG00000001142 7:22171439-22179122   CU466447,CH242-214G3,7:22164394-22211337
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
HFE location ⇒ 7:21950927-21951190   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
HFE location ⇒ 7:21951361-21951660   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
HFE location ⇒ 7:22175416-22175679   CU466447,CH242-214G3,7:22164394-22211337
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
HFE location ⇒ 7:22175850-22176149   CU466447,CH242-214G3,7:22164394-22211337
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
HFE2   ENSSSCG00000006680 4:103414550-103416959   CU151864,CH242-277H11,4:103383388-103453720
(Clone quality: bE277H11 on chr=4; Num_of_Contigs=7; )
HFL1 location ⇒ 10:20970687-20970833   CU570835,CH242-258F22,10:20960005-21004045
(Clone quality: bE258F22 on chr=10; Num_of_Contigs=4; )
HFM1   ENSSSCG00000006912 4:129781480-129851869 CU179709,CH242-295H20,4:129730313-129927458
(Clone quality: bE295H20 on chr=4; Num_of_Contigs=2; ) 		 
HGF ENSSSCG00000008478 3:94348534-94428414    
HGF ENSSSCG00000015403 9:92175390-92247184   CU656003,CH242-320H24,9:92087907-92264482
(Clone quality: bE320H24 on chr=9; Num_of_Contigs=1; )
HGF ENSSSCG00000016633 18:28212432-28297096    
HGF ENSSSCG00000008700 8:1418815-1426145   CU694640,CH242-5O13,8:1410358-1431190
(Clone quality: bE5O13 on chr=8; Num_of_Contigs=13; )
HGF location ⇒ 9:92193326-92193469   CU656003,CH242-320H24,9:92087907-92264482
(Clone quality: bE320H24 on chr=9; Num_of_Contigs=1; )
HGFAC ENSSSCG00000008700 8:1418815-1426145   CU694640,CH242-5O13,8:1410358-1431190
(Clone quality: bE5O13 on chr=8; Num_of_Contigs=13; )
HGFAC location ⇒ 8:1422667-1422486   CU694640,CH242-5O13,8:1410358-1431190
(Clone quality: bE5O13 on chr=8; Num_of_Contigs=13; )
HGFAC location ⇒ 8:1424648-1424507   CU694640,CH242-5O13,8:1410358-1431190
(Clone quality: bE5O13 on chr=8; Num_of_Contigs=13; )
HGFAC location ⇒ 8:1424895-1424746   CU694640,CH242-5O13,8:1410358-1431190
(Clone quality: bE5O13 on chr=8; Num_of_Contigs=13; )
HGFAC location ⇒ 8:1426134-1425883   CU694640,CH242-5O13,8:1410358-1431190
(Clone quality: bE5O13 on chr=8; Num_of_Contigs=13; )
HGSNAT   ENSSSCG00000007003 17:8373250-8421085    
HHAT   ENSSSCG00000015607 9:124688872-124962380    
HHATL   ENSSSCG00000011287 13:22079961-22089589   CU928031,CH242-357P22,13:22054047-22118385
(Clone quality: bE357P22 on chr=13; Num_of_Contigs=3; )
HHEX ENSSSCG00000010472 14:109303576-109308836   CU467586,CH242-452J20,14:109181517-109354289
(Clone quality: bE452J20 on chr=14; Num_of_Contigs=2; )
HHEX location ⇒ 8:77422251-77421591   CU681847,CH242-100L2,8:77368898-77512358
(Clone quality: bE100L2 on chr=8; Num_of_Contigs=3; )
HHIP   ENSSSCG00000009045 8:72209024-72296889    
HHIPL1   ENSSSCG00000002511 7:130128980-130144637   CU571145,CH242-65E11,7:130103928-130144638
(Clone quality: bE65E11 on chr=7; Num_of_Contigs=7; )
HHIPL2   ENSSSCG00000010832 10:11375678-11394612   CU929023,CH242-218C2,10:11328820-11437324
(Clone quality: bE218C2 on chr=10; Num_of_Contigs=4; )
HIAN2 ENSSSCG00000016446 18:5324625-5329744   CU928555,CH242-184M19,18:5311847-5340927
(Clone quality: bE184M19 on chr=18; Num_of_Contigs=14; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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