A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IFNA9 location ⇒ 1:210545851-210545916   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFNB1 ENSSSCG00000005163 1:210614616-210615176   FP102266,CH242-81G10,1:210598988-210645569
(Clone quality: bE81G10 on chr=1; Num_of_Contigs=3; )
IFNB1 location ⇒ 1:210614616-210615176   FP102266,CH242-81G10,1:210598988-210645569
(Clone quality: bE81G10 on chr=1; Num_of_Contigs=3; )
IFND1 location ⇒ 1:210098567-210098622   CU469469,CH242-142L3,1:210062719-210118069
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFND1 location ⇒ 1:210194046-210193976   CU618316,CH242-254N10,1:210188634-210217788
(Clone quality: bE254N10 on chr=1; Num_of_Contigs=2; )
IFND1 location ⇒ 1:210330107-210330177   CU651597,CH242-112J16,1:210311258-210361052
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
IFND1 location ⇒ 1:210545801-210545880   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFND10 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IFND11 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IFND11* location ⇒ 1:156001-156122   CU570732,CH242-271M12,1:134021-160644
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND11* location ⇒ 1:186054-185977   CU570732,CH242-271M12,1:160745-198458
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND11* location ⇒ 1:228098-228167   CU633205,CH242-116C20,1:227774-246103
(Clone quality: bE116C20 on chr=1; Num_of_Contigs=14; )
IFND11* location ⇒ 1:26885-26792   CU570732,CH242-271M12,1:1-31034
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND2 location ⇒ 1:210059121-210059366   CU469469,CH242-142L3,1:210028841-210062618
(Clone quality: bE142L3 on chr=1; Num_of_Contigs=6; )
IFND2 location ⇒ 1:210137319-210137117   CU618316,CH242-254N10,1:210132941-210188533
(Clone quality: bE254N10 on chr=1; Num_of_Contigs=2; )
IFND2 location ⇒ 1:210399597-210399799   CU651597,CH242-112J16,1:210398404-210404982
(Clone quality: bE112J16 on chr=1; Num_of_Contigs=9; )
IFND2 location ⇒ 1:210545801-210545881   CU633414,CH242-414D14,1:210407307-210572645
(Clone quality: bE414D14 on chr=1; Num_of_Contigs=1; )
IFND3 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IFND3* location ⇒ 1:17790-17891   CU570732,CH242-271M12,1:1-31034
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND3* location ⇒ 1:17793-17894   CU570732,CH242-271M12,1:1-31034
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND3* location ⇒ 1:209834098-209839286   CU024909,CH242-42C13,1:209768205-209881982
(Clone quality: bE42C13 on chr=1; Num_of_Contigs=4; )
IFND3* location ⇒ 1:9425-9546   CU570732,CH242-271M12,1:1-31034
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND4 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IFND5 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IFND7 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IFND8 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IFND8* location ⇒ 1:17790-17891   CU570732,CH242-271M12,1:1-31034
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND8* location ⇒ 1:17793-17894   CU570732,CH242-271M12,1:1-31034
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND8* location ⇒ 1:209834098-209839286   CU024909,CH242-42C13,1:209768205-209881982
(Clone quality: bE42C13 on chr=1; Num_of_Contigs=4; )
IFND8* location ⇒ 1:9425-9546   CU570732,CH242-271M12,1:1-31034
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND9 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IFND9* location ⇒ 1:156001-156122   CU570732,CH242-271M12,1:134021-160644
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND9* location ⇒ 1:186054-185977   CU570732,CH242-271M12,1:160745-198458
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFND9* location ⇒ 1:228098-228167   CU633205,CH242-116C20,1:227774-246103
(Clone quality: bE116C20 on chr=1; Num_of_Contigs=14; )
IFND9* location ⇒ 1:26885-26792   CU570732,CH242-271M12,1:1-31034
(Clone quality: bE271M12 on chr=1; Num_of_Contigs=7; )
IFNE   ENSSSCG00000005136 1:209963290-209963871   CU074336,CH242-81E23,1:209960698-209975134
(Clone quality: bE81E23 on chr=1; Num_of_Contigs=6; )
IFNE1 ENSSSCG00000005136 1:209963290-209963871   CU074336,CH242-81E23,1:209960698-209975134
(Clone quality: bE81E23 on chr=1; Num_of_Contigs=6; )
IFNG ENSSSCG00000000481 5:31794327-31799589   CU694828,CH242-167J2,5:31764796-31807287
(Clone quality: bE167J2 on chr=5; Num_of_Contigs=11; )
IFNG ENSSSCG00000007327 17:42465490-42480949   CU606915,CH242-133O2,17:42464913-42481089
(Clone quality: bE133O2 on chr=17; Num_of_Contigs=6; )
IFNG location ⇒ 5:31798037-31797958   CU694828,CH242-167J2,5:31764796-31807287
(Clone quality: bE167J2 on chr=5; Num_of_Contigs=11; )
IFNGR1 ENSSSCG00000004156 1:28492000-28512144   CU302366,CH242-266L9,1:28341732-28512176
(Clone quality: bE266L9 on chr=1; Num_of_Contigs=1; )
IFNGR1 location ⇒ 1:28501715-28501551   CU302366,CH242-266L9,1:28341732-28512176
(Clone quality: bE266L9 on chr=1; Num_of_Contigs=1; )
IFNGR1 location ⇒ 1:28504227-28504050   CU302366,CH242-266L9,1:28341732-28512176
(Clone quality: bE266L9 on chr=1; Num_of_Contigs=1; )
IFNGR1 location ⇒ 1:28506385-28506194   CU302366,CH242-266L9,1:28341732-28512176
(Clone quality: bE266L9 on chr=1; Num_of_Contigs=1; )
IFNGR1 location ⇒ 1:28509659-28509532   CU302366,CH242-266L9,1:28341732-28512176
(Clone quality: bE266L9 on chr=1; Num_of_Contigs=1; )
IFNK ENSSSCG00000011011 10:37587861-37588487   CU463237,CH242-211P9,10:37585656-37713843
(Clone quality: bE211P9 on chr=10; Num_of_Contigs=1; )
IFNR location ⇒ 1:28501551-28501715   CU302366,CH242-266L9,1:28341732-28512176
(Clone quality: bE266L9 on chr=1; Num_of_Contigs=1; )
IFNR location ⇒ 1:28504050-28504227   CU302366,CH242-266L9,1:28341732-28512176
(Clone quality: bE266L9 on chr=1; Num_of_Contigs=1; )
IFNR location ⇒ 1:28506194-28506385   CU302366,CH242-266L9,1:28341732-28512176
(Clone quality: bE266L9 on chr=1; Num_of_Contigs=1; )
IFNR location ⇒ 1:28511589-28512662    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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