A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
GBP3 location ⇒ 4:131730253-131730374   CU861570,CH242-69O2,4:131693844-131751869
(Clone quality: bE69O2 on chr=4; Num_of_Contigs=3; )
GBP3 location ⇒ 4:131870047-131870109   CU861570,CH242-69O2,4:131837211-131870951
(Clone quality: bE69O2 on chr=4; Num_of_Contigs=3; )
GBP3 location ⇒ 4:132096369-132097513   CU151869,CH242-289B10,4:132020285-132181322
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBP4 location ⇒ 4:132025553-132025837   CU151869,CH242-289B10,4:132020285-132181322
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBP4 location ⇒ 4:132030964-132031409   CU151869,CH242-289B10,4:132020285-132181322
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBP4 location ⇒ 4:132056059-132055966   CU151869,CH242-289B10,4:132020285-132181322
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBP4 location ⇒ 4:132087012-132087105   CU151869,CH242-289B10,4:132020285-132181322
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBX2   ENSSSCG00000016319 15:128448956-128451002   CU694589,CH242-264H17,15:128430391-128459784
(Clone quality: bE264H17 on chr=15; Num_of_Contigs=5; )
GCA ENSSSCG00000015899 15:64425987-64434841    
GCA ENSSSCG00000015899 15:64425987-64434841    
GCC1   ENSSSCG00000016594 18:18827181-18831371   CU861978,CH242-2M6,18:18763764-18883603
(Clone quality: bE2M6 on chr=18; Num_of_Contigs=4; )
GCC2   ENSSSCG00000008138 3:42959715-42992390   FP102256,CH242-427M21,3:42955088-43026562
(Clone quality: bE427M21 on chr=3; Num_of_Contigs=5; )
GCDH_PIG   ENSSSCG00000013729 2:55998084-56002447   CU914382,CH242-275M24,2:55996730-56024973
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
GCG   ENSSSCG00000015895 15:64064865-64074555   FP236295,CH242-307K18,15:64035899-64089331
(Clone quality: bE307K18 on chr=15; Num_of_Contigs=3; )
GCH1 ENSSSCG00000005051 1:192775785-192829579    
GCH1 location ⇒ 1:192790576-192790517   CU480474,CH242-104E15,1:192784672-192795505
(Clone quality: bE104E15 on chr=1; Num_of_Contigs=4; )
GCH1 location ⇒ 1:192799431-192799316   CU480474,CH242-104E15,1:192795606-192935257
(Clone quality: bE104E15 on chr=1; Num_of_Contigs=4; )
GCH1 location ⇒ 1:192829579-192829098   CU480474,CH242-104E15,1:192795606-192935257
(Clone quality: bE104E15 on chr=1; Num_of_Contigs=4; )
GCHFR   ENSSSCG00000004764 1:137056316-137060695   CU633257,CH242-257P7,1:137003112-137140964
(Clone quality: bE257P7 on chr=1; Num_of_Contigs=3; )
GCK   ENSSSCG00000016751 18:49551816-49566391   CU928907,CH242-155A21,18:49534481-49598883
(Clone quality: bE155A21 on chr=18; Num_of_Contigs=2; )
GCLC   ENSSSCG00000001488 7:31548098-31590458    
GCLM   ENSSSCG00000006891 4:127667481-127682990   CU582963,CH242-133N10,4:127667298-127798755
(Clone quality: bE133N10 on chr=4; Num_of_Contigs=2; )
GCM1   ENSSSCG00000002630 7:135941271-135947700   CU467955,CH242-394C19,7:135939887-135949552
(Clone quality: bE394C19 on chr=7; Num_of_Contigs=14; )
GCM2   ENSSSCG00000001043 7:7971323-7972240   CU407176,CH242-253P8,7:7966349-7972480
(Clone quality: bE253P8 on chr=7; Num_of_Contigs=5; )
GCN1L1   ENSSSCG00000009898 14:40297853-40457677    
GCNT1 ENSSSCG00000005277 1:239982392-239983678   CU469178,CH242-516N8,1:239977161-240042665
(Clone quality: bE516N8 on chr=1; Num_of_Contigs=4; )
GCNT2 ENSSSCG00000001039 7:7792484-7827061   CU468900,CH242-267B16,7:7778252-7870334
(Clone quality: bE267B16 on chr=7; Num_of_Contigs=4; )
GCNT2 location ⇒ 7:7724178-7724529   CT990468,CH242-180C15,7:7681845-7757452
(Clone quality: bE180C15 on chr=7; Num_of_Contigs=7; )
GCNT2 location ⇒ 7:7736457-7737390   CT990468,CH242-180C15,7:7681845-7757452
(Clone quality: bE180C15 on chr=7; Num_of_Contigs=7; )
GCNT2 location ⇒ 7:7768881-7769261   CT990468,CH242-180C15,7:7757553-7778251
(Clone quality: bE180C15 on chr=7; Num_of_Contigs=7; )
GCNT2 location ⇒ 7:7793347-7793408   CU468900,CH242-267B16,7:7778252-7870334
(Clone quality: bE267B16 on chr=7; Num_of_Contigs=4; )
GCNT4   ENSSSCG00000014077 2:73043998-73045359   CU462937,CH242-315E1,2:72965748-73070688
(Clone quality: bE315E1 on chr=2; Num_of_Contigs=2; )
GCNT7   ENSSSCG00000007497 17:59596557-59603318 CR956640,CH242-155M9,17:59463698-59643740
(No clone quality info on bE155M9) 		 
GCSH   ENSSSCG00000002625 7:135712983-135713897   CU633247,CH242-235D18,7:135691848-135737179
(Clone quality: bE235D18 on chr=7; Num_of_Contigs=14; )
GDA   ENSSSCG00000005265 1:236136068-236144749   CU469484,CH242-467O18,1:236135215-236144921
(Clone quality: bE467O18 on chr=1; Num_of_Contigs=26; )
GDAP1   ENSSSCG00000006173 4:63650916-63666758   CU468144,CH242-118O24,4:63604365-63681848
(Clone quality: bE118O24 on chr=4; Num_of_Contigs=7; )
GDAP1L1   ENSSSCG00000007373 17:48568671-48592641    
GDAP2   ENSSSCG00000006728 4:106940600-107005409   FP085476,CH242-126H22,4:106910548-107082186
(Clone quality: bE126H22 on chr=4; Num_of_Contigs=1; )
GDE1   ENSSSCG00000003813 6:105004257-105004400   CU929719,CH242-211O22,6:104855552-105005170
(Clone quality: bE211O22 on chr=6; Num_of_Contigs=2; )
GDF1   ENSSSCG00000013928 2:63254816-63256476   CU640483,CH242-64G8,2:63253485-63260475
(Clone quality: bE64G8 on chr=2; Num_of_Contigs=8; )
GDF10   ENSSSCG00000010376 14:92293658-92304410   FP085539,CH242-432I14,14:92268600-92352434
(Clone quality: bE432I14 on chr=14; Num_of_Contigs=7; )
GDF11   ENSSSCG00000000363 5:20142581-20150022 CU606916,CH242-141C7,5:20096881-20252808
(Clone quality: bE141C7 on chr=5; Num_of_Contigs=1; ) 		 
GDF2   ENSSSCG00000010375 14:92279082-92283177   FP085539,CH242-432I14,14:92268600-92352434
(Clone quality: bE432I14 on chr=14; Num_of_Contigs=7; )
GDF3   ENSSSCG00000000669 5:59585661-59591366   CU929253,CH242-247J12,5:59540620-59665539
(Clone quality: bE247J12 on chr=5; Num_of_Contigs=6; )
GDF5 location ⇒ 17:40640863-40640293   CU606930,CH242-408M19,17:40602020-40753042
(Clone quality: bE408M19 on chr=17; Num_of_Contigs=1; )
GDF5 location ⇒ 17:40841535-40840965   FP236779,CH242-109N7,17:40838650-40866540
(Clone quality: bE109N7 on chr=17; Num_of_Contigs=20; )
GDF6 location ⇒ 4:40905909-40906161   CU179716,CH242-362G20,4:40905849-40966129
(Clone quality: bE362G20 on chr=4; Num_of_Contigs=8; )
GDF6 location ⇒ 4:40906408-40907395   CU179716,CH242-362G20,4:40905849-40966129
(Clone quality: bE362G20 on chr=4; Num_of_Contigs=8; )
GDF6 location ⇒ 4:40907269-40906466   CU179716,CH242-362G20,4:40905849-40966129
(Clone quality: bE362G20 on chr=4; Num_of_Contigs=8; )
GDF8 ENSSSCG00000016047 15:89151697-89157090    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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