A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
GARS ENSSSCG00000016677 18:40739502-40779080    
GAS1 ENSSSCG00000010951 10:27386023-27387410    
GAS2 ENSSSCG00000000874 5:79329998-79348547    
GAS2 ENSSSCG00000017710 12:37576750-37585209   CU914398,CH242-121H9,12:37483147-37597733
(Clone quality: bE121H9 on chr=12; Num_of_Contigs=11; )
GAS2L2   ENSSSCG00000017710 12:37576750-37585209   CU914398,CH242-121H9,12:37483147-37597733
(Clone quality: bE121H9 on chr=12; Num_of_Contigs=11; )
GAS2L3   ENSSSCG00000000874 5:79329998-79348547    
GAS6 ENSSSCG00000009565 11:79112288-79143399    
GAS8   ENSSSCG00000002633 6:7174-21534    
GAST ENSSSCG00000017435 12:18862215-18864446   CU972362,CH242-2B19,12:18839626-18870321
(Clone quality: bE2B19 on chr=12; Num_of_Contigs=14; )
GAST ENSSSCG00000017426 12:18646045-18648277   CU928665,CH242-332K23,12:18640749-18703424
(Clone quality: bE332K23 on chr=12; Num_of_Contigs=7; )
GAST location ⇒ 12:18647742-18647962   CU928665,CH242-332K23,12:18640749-18703424
(Clone quality: bE332K23 on chr=12; Num_of_Contigs=7; )
GAST location ⇒ 12:18648086-18648277   CU928665,CH242-332K23,12:18640749-18703424
(Clone quality: bE332K23 on chr=12; Num_of_Contigs=7; )
GAST location ⇒ 12:18863911-18864131   CU972362,CH242-2B19,12:18839626-18870321
(Clone quality: bE2B19 on chr=12; Num_of_Contigs=14; )
GAST location ⇒ 12:18864255-18864446   CU972362,CH242-2B19,12:18839626-18870321
(Clone quality: bE2B19 on chr=12; Num_of_Contigs=14; )
GATA1 location ⇒ 17:63952257-63952361   CU607084,CH242-119P9,17:63945052-63957472
(Clone quality: bE119P9 on chr=17; Num_of_Contigs=6; )
GATA2 ENSSSCG00000011618 13:59555573-59562940    
GATA2 location ⇒ 13:59556759-59555604   CU915317,CH242-211J16,13:59550087-59558305
(Clone quality: bE211J16 on chr=13; Num_of_Contigs=17; )
GATA2 location ⇒ 13:59559921-59559773   CU915317,CH242-211J16,13:59558406-59563455
(Clone quality: bE211J16 on chr=13; Num_of_Contigs=17; )
GATA2 location ⇒ 13:59562233-59561591   CU915317,CH242-211J16,13:59558406-59563455
(Clone quality: bE211J16 on chr=13; Num_of_Contigs=17; )
GATA2 location ⇒ 13:59562935-59562659   CU915317,CH242-211J16,13:59558406-59563455
(Clone quality: bE211J16 on chr=13; Num_of_Contigs=17; )
GATA3 ENSSSCG00000011125 10:59890669-59909258    
GATA3 location ⇒ 10:59891228-59890685   CU694853,CH242-240K20,10:59885155-59901745
(Clone quality: bE240K20 on chr=10; Num_of_Contigs=7; )
GATA3 location ⇒ 10:59900496-59900349   CU694853,CH242-240K20,10:59885155-59901745
(Clone quality: bE240K20 on chr=10; Num_of_Contigs=7; )
GATA3 location ⇒ 10:59906442-59906163   CU694853,CH242-240K20,10:59901846-59906444
(Clone quality: bE240K20 on chr=10; Num_of_Contigs=7; )
GATA3 location ⇒ 10:59909391-59909021   CU694853,CH242-240K20,10:59906545-59917630
(Clone quality: bE240K20 on chr=10; Num_of_Contigs=7; )
GATA4 location ⇒ 17:63952224-63952340   CU607084,CH242-119P9,17:63945052-63957472
(Clone quality: bE119P9 on chr=17; Num_of_Contigs=6; )
GATA5   ENSSSCG00000007538 17:63950537-63959505    
GATA6 ENSSSCG00000003702 6:73003570-73033428   CU929845,CH242-6K20,6:73001448-73073143
(Clone quality: bE6K20 on chr=6; Num_of_Contigs=2; )
GATA6 location ⇒ 6:73003570-73003848   CU929845,CH242-6K20,6:73001448-73073143
(Clone quality: bE6K20 on chr=6; Num_of_Contigs=2; )
GATA6 location ⇒ 6:73004059-73004272   CU929845,CH242-6K20,6:73001448-73073143
(Clone quality: bE6K20 on chr=6; Num_of_Contigs=2; )
GATA6 location ⇒ 6:73008672-73008843   CU929845,CH242-6K20,6:73001448-73073143
(Clone quality: bE6K20 on chr=6; Num_of_Contigs=2; )
GATA6 location ⇒ 6:73032010-73033400   CU929845,CH242-6K20,6:73001448-73073143
(Clone quality: bE6K20 on chr=6; Num_of_Contigs=2; )
GATAD2A   ENSSSCG00000013938 2:63507891-63546038   FP015820,CH242-73N10,2:63437356-63592582
(Clone quality: bE73N10 on chr=2; Num_of_Contigs=2; )
GATAD2B   ENSSSCG00000006562 4:99887769-100006292    
GATC   ENSSSCG00000009907 14:40541246-40550828    
GATM   ENSSSCG00000004672 1:132009466-132026292   CU457441,CH242-247F23,1:131950006-132050038
(Clone quality: bE247F23 on chr=1; Num_of_Contigs=7; )
GATSL3   ENSSSCG00000009998 14:48036169-48040998 CT827833,CH242-227A13,14:47931258-48074674
(Clone quality: bE227A13 on chr=14; Num_of_Contigs=2; ) 		 
GBA2   ENSSSCG00000005319 1:247548730-247560205   CU062658,CH242-97C14,1:247546808-247583035
(Clone quality: bE97C14 on chr=1; Num_of_Contigs=2; )
GBE1   ENSSSCG00000012000 13:125235109-125343601    
GBF1   ENSSSCG00000010579 14:118227136-118361091   CU407032,CH242-176B16,14:118180747-118362423
(Clone quality: bE176B16 on chr=14; Num_of_Contigs=3; )
GBP1 location ⇒ 4:131730002-131730057   CU861570,CH242-69O2,4:131693844-131751869
(Clone quality: bE69O2 on chr=4; Num_of_Contigs=3; )
GBP1 location ⇒ 4:131870054-131870109   CU861570,CH242-69O2,4:131837211-131870951
(Clone quality: bE69O2 on chr=4; Num_of_Contigs=3; )
GBP1 location ⇒ 4:132055054-132054945   CU151869,CH242-289B10,4:132020285-132181322
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBP1 location ⇒ 4:132093113-132093172   CU151869,CH242-289B10,4:132020285-132181322
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBP2 ENSSSCG00000006923 4:132042599-132106791   CU151869,CH242-289B10,4:132020285-132181322
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBP2 location ⇒ 4:131938362-131938466   CU462831,CH242-132K23,4:131932250-131958437
(Clone quality: bE132K23 on chr=4; Num_of_Contigs=3; )
GBP2 location ⇒ 4:131940566-131940621   CU462831,CH242-132K23,4:131932250-131958437
(Clone quality: bE132K23 on chr=4; Num_of_Contigs=3; )
GBP2 location ⇒ 4:131998940-131999044   CU151869,CH242-289B10,4:131989420-132020184
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBP2 location ⇒ 4:132001144-132001199   CU151869,CH242-289B10,4:131989420-132020184
(Clone quality: bE289B10 on chr=4; Num_of_Contigs=2; )
GBP3 location ⇒ 4:131729995-131730057   CU861570,CH242-69O2,4:131693844-131751869
(Clone quality: bE69O2 on chr=4; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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