A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
VCAN   ENSSSCG00000014136 2:81117534-81217023    
VCL ENSSSCG00000010313 14:80002216-80113814    
VCL location ⇒ 14:80090512-80090713   CU468344,CH242-336P14,14:80025525-80096881
(Clone quality: bE336P14 on chr=14; Num_of_Contigs=4; )
VCL location ⇒ 14:80099308-80099616   CU468344,CH242-336P14,14:80096982-80132473
(Clone quality: bE336P14 on chr=14; Num_of_Contigs=4; )
VCL location ⇒ 14:80108269-80108477   CU468344,CH242-336P14,14:80096982-80132473
(Clone quality: bE336P14 on chr=14; Num_of_Contigs=4; )
VCL location ⇒ 14:80111694-80113810   CU468344,CH242-336P14,14:80096982-80132473
(Clone quality: bE336P14 on chr=14; Num_of_Contigs=4; )
VCP ENSSSCG00000005300 1:246885131-246891351   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCP ENSSSCG00000016688 18:41992393-42112037    
VCP location ⇒ 1:246885495-246885141   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCP location ⇒ 1:246885799-246885529   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCP location ⇒ 1:246888333-246888022   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCP location ⇒ 1:246888749-246888534   FP102396,CH242-207N19,1:246822188-246892961
(Clone quality: bE207N19 on chr=1; Num_of_Contigs=1; )
VCPIP1 ENSSSCG00000006209 4:70606398-70609218   CU694736,CH242-488G24,4:70593364-70620019
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VCPIP1 location ⇒ 4:70609105-70606505   CU694736,CH242-488G24,4:70593364-70620019
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VCPIP1 location ⇒ 4:70609480-70609211   CU694736,CH242-488G24,4:70593364-70620019
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VCPIP1 location ⇒ 4:70694106-70695802   CU694736,CH242-488G24,4:70682631-70697171
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VCPIP1 location ⇒ 4:70695837-70696599   CU694736,CH242-488G24,4:70682631-70697171
(Clone quality: bE488G24 on chr=4; Num_of_Contigs=19; )
VDAC1   ENSSSCG00000014296 2:124100578-124132798   CU928302,CH242-266O13,2:124032962-124185534
(Clone quality: bE266O13 on chr=2; Num_of_Contigs=2; )
VDAC2   ENSSSCG00000010320 14:80983232-80998329    
VDAC3_PIG   ENSSSCG00000007026 17:11662023-11675645   CU607029,CH242-261P4,17:11661510-11675776
(Clone quality: bE261P4 on chr=17; Num_of_Contigs=18; )
VEGF ENSSSCG00000009320 11:5109985-5182015    
VEGF ENSSSCG00000008844 8:36147302-36193200    
VEGF ENSSSCG00000008871 8:39641095-39655063   CU694633,CH242-50J11,8:39612409-39672403
(Clone quality: bE50J11 on chr=8; Num_of_Contigs=3; )
VEGF ENSSSCG00000006466 4:96975677-96984979   CU151867,CH242-283E3,4:96970968-96992486
(Clone quality: bE283E3 on chr=4; Num_of_Contigs=3; )
VEGF ENSSSCG00000003048 6:34715572-34728644    
VEGF ENSSSCG00000001695 7:45212174-45226773 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; ) 		 
VEGFA ENSSSCG00000001695 7:45212174-45226773 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; ) 		 
VEGFA location ⇒ 7:45065102-45065233   CU633430,CH242-74P4,7:45065024-45069059
(Clone quality: bE74P4 on chr=7; Num_of_Contigs=15; )
VEGFA location ⇒ 7:45219132-45219337 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; ) 		 
VEGFA location ⇒ 7:45220142-45220221 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; ) 		 
VEGFA location ⇒ 7:45223748-45223879 CT009664,CH242-113D8,7:45120002-45302047
(Clone quality: bE113D8 on chr=7; Num_of_Contigs=4; ) 		 
VEGFB ENSSSCG00000013037 2:6257340-6425983    
VEGFB location ⇒ 2:6257795-6257340   CU861533,CH242-1H13,2:6249822-6260732
(Clone quality: bE1H13 on chr=2; Num_of_Contigs=14; )
VEGFB location ⇒ 2:6258451-6258376   CU861533,CH242-1H13,2:6249822-6260732
(Clone quality: bE1H13 on chr=2; Num_of_Contigs=14; )
VEGFB location ⇒ 2:6258616-6258548   CU861533,CH242-1H13,2:6249822-6260732
(Clone quality: bE1H13 on chr=2; Num_of_Contigs=14; )
VEGFC ENSSSCG00000015770 15:35992060-36022123   CU855957,CH242-117E11,15:35977438-36022572
(Clone quality: bE117E11 on chr=15; Num_of_Contigs=3; )
VEGFC location ⇒ 15:35992515-35992051   CU855957,CH242-117E11,15:35977438-36022572
(Clone quality: bE117E11 on chr=15; Num_of_Contigs=3; )
VEPH1   ENSSSCG00000011726 13:76943354-77196954    
VEZF1   ENSSSCG00000017623 12:31821607-31831017    
VEZT   ENSSSCG00000000900 5:83019042-83075343    
VGLL2   ENSSSCG00000004255 1:46534886-46558313    
VGLL3   ENSSSCG00000011998 13:123460953-123482911   CU855502,CH242-220K13,13:123385679-123484764
(Clone quality: bE220K13 on chr=13; Num_of_Contigs=4; )
VHL   ENSSSCG00000011567 13:55518347-55524222   CU655990,CH242-268L7,13:55512556-55562333
(Clone quality: bE268L7 on chr=13; Num_of_Contigs=5; )
VIL1 ENSSSCG00000016196 15:113753166-113781747   CU570813,CH242-128B23,15:113737340-113786153
(Clone quality: bE128B23 on chr=15; Num_of_Contigs=4; )
VIL2 ENSSSCG00000004058 1:9726842-9735175   CU498836,CH242-100E21,1:9701420-9739940
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
VIL2 location ⇒ 1:9520181-9519905   CU570667,CH242-519K4,1:9517083-9533228
(Clone quality: bE519K4 on chr=1; Num_of_Contigs=9; )
VIL2 location ⇒ 1:9521118-9521018   CU570667,CH242-519K4,1:9517083-9533228
(Clone quality: bE519K4 on chr=1; Num_of_Contigs=9; )
VIL2 location ⇒ 1:9585062-9585162   CU498836,CH242-100E21,1:9578701-9588240
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
VIL2 location ⇒ 1:9585999-9586275   CU498836,CH242-100E21,1:9578701-9588240
(Clone quality: bE100E21 on chr=1; Num_of_Contigs=11; )
VILL   ENSSSCG00000011246 13:18719987-18735496   FP102094,CH242-358M17,13:18718581-18739574
(Clone quality: bE358M17 on chr=13; Num_of_Contigs=15; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-24

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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