A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
OASL location ⇒ 14:41079109-41078720   CU467935,CH242-88C19,14:41073943-41095092
(Clone quality: bE88C19 on chr=14; Num_of_Contigs=7; )
OAT   ENSSSCG00000010734 14:140693803-140716055   CU468348,CH242-366L11,14:140685935-140753147
(Clone quality: bE366L11 on chr=14; Num_of_Contigs=5; )
OAZ1   ENSSSCG00000013460 2:47213631-47216619   FP089467,CH242-185G23,2:47173729-47314390
(Clone quality: bE185G23 on chr=2; Num_of_Contigs=3; )
OAZ2   ENSSSCG00000004550 1:110516647-110534181    
OBFC1   ENSSSCG00000010605 14:119917759-119957463    
OBFC2A   ENSSSCG00000016062 15:90810652-90818456   CU467019,CH242-106I15,15:90710767-90898510
(Clone quality: bE106I15 on chr=15; Num_of_Contigs=3; )
OBFC2B   ENSSSCG00000000384 5:20546900-20676966    
OBP_PIG   ENSSSCG00000012095 X:1587313-1594826 CU914699,CH242-216A23,X:1468476-1601373
(Clone quality: bE216A23 on chr=X; Num_of_Contigs=3; )
 
OBSCN location ⇒ 2:66779246-66779421 CU929744,CH242-261H16,2:66657951-66833633
(Clone quality: bE261H16 on chr=2; Num_of_Contigs=5; )
 
OBSCN location ⇒ 2:66780008-66780121 CU929744,CH242-261H16,2:66657951-66833633
(Clone quality: bE261H16 on chr=2; Num_of_Contigs=5; )
 
OBSCN location ⇒ 2:66785491-66785660 CU929744,CH242-261H16,2:66657951-66833633
(Clone quality: bE261H16 on chr=2; Num_of_Contigs=5; )
 
OBSCN location ⇒ 2:66786078-66786186 CU929744,CH242-261H16,2:66657951-66833633
(Clone quality: bE261H16 on chr=2; Num_of_Contigs=5; )
 
OC90   ENSSSCG00000005954 4:7961433-7994955    
OCA2 ENSSSCG00000015854 15:53475356-53635748    
OCEL1   ENSSSCG00000013874 2:61687330-61690157   CU914416,CH242-266I16,2:61677550-61716362
(Clone quality: bE266I16 on chr=2; Num_of_Contigs=8; )
OCIAD1   ENSSSCG00000008828 8:33235572-33251697    
OCIAD2   ENSSSCG00000008829 8:33255807-33276135    
OCLN ENSSSCG00000016965 16:44868391-44885645   FP085466,CH242-439N13,16:44865154-44885967
(Clone quality: bE439N13 on chr=16; Num_of_Contigs=9; )
OCLN location ⇒ 16:44868557-44868392   FP085466,CH242-439N13,16:44865154-44885967
(Clone quality: bE439N13 on chr=16; Num_of_Contigs=9; )
OCRL   ENSSSCG00000012650 X:104334131-104385925   CU928865,CH242-162N8,X:104328725-104385934
(Clone quality: bE162N8 on chr=X; Num_of_Contigs=8; )
ODAM ENSSSCG00000009266 8:119924963-119933735    
ODC1 ENSSSCG00000001942 7:69194121-69401052    
ODC1 location ⇒ 2:55189264-55189440   FP101867,CH242-173I24,2:55175676-55193045
(Clone quality: bE173I24 on chr=2; Num_of_Contigs=21; )
ODF1   ENSSSCG00000006056 4:34820293-34829912   CU137730,CH242-38K18,4:34812749-34881844
(Clone quality: bE38K18 on chr=4; Num_of_Contigs=7; )
ODF2   ENSSSCG00000005651 1:283545588-283558107    
ODF3   ENSSSCG00000014555 2:139825940-139829174   CU928488,CH242-163I11,2:139819049-139956868
(Clone quality: bE163I11 on chr=2; Num_of_Contigs=2; )
ODF3B   ENSSSCG00000000967 5:99714208-99715746   CU929756,CH242-288F8,5:99690941-99727774
(Clone quality: bE288F8 on chr=5; Num_of_Contigs=8; )
ODF3L1   ENSSSCG00000001879 7:63378007-63381173   CU582918,CH242-27K6,7:63365252-63398172
(Clone quality: bE27K6 on chr=7; Num_of_Contigs=5; )
ODZ1 ENSSSCG00000014895 9:13281789-13286550   CU914456,CH242-81P21,9:13279128-13288435
(Clone quality: bE81P21 on chr=9; Num_of_Contigs=23; )
ODZ1 ENSSSCG00000012644 X:99614194-99884416    
ODZ1 location ⇒ X:99614954-99614750 FP085529,CH242-373I23,X:99598585-99671293
(Clone quality: bE373I23 on chr=X; Num_of_Contigs=3; )
 
ODZ1 location ⇒ X:99617293-99617146 FP085529,CH242-373I23,X:99598585-99671293
(Clone quality: bE373I23 on chr=X; Num_of_Contigs=3; )
 
ODZ1 location ⇒ X:99618603-99618094 FP085529,CH242-373I23,X:99598585-99671293
(Clone quality: bE373I23 on chr=X; Num_of_Contigs=3; )
 
ODZ2   ENSSSCG00000017018 16:53069753-53282894    
ODZ3   ENSSSCG00000015774 15:41483604-41638635    
ODZ4   ENSSSCG00000014894 9:13018102-13249022    
OFCC1   ENSSSCG00000001035 7:7077372-7097815   CT967299,CH242-225E6,7:7043334-7211242
(Clone quality: bE225E6 on chr=7; Num_of_Contigs=15; )
OFD1   ENSSSCG00000012125 X:9479142-9530807    
OGDH   ENSSSCG00000016743 18:49179772-49236717    
OGDHL   ENSSSCG00000010394 14:94048996-94076506   CT990602,CH242-369H2,14:94016627-94077443
(Clone quality: bE369H2 on chr=14; Num_of_Contigs=4; )
OGFOD2   ENSSSCG00000009783 14:29965398-29970729   CU467951,CH242-194A1,14:29956356-29993852
(Clone quality: bE194A1 on chr=14; Num_of_Contigs=2; )
OGFRL1   ENSSSCG00000004279 1:53749260-53762044   CU914297,CH242-79F11,1:53747101-53830544
(Clone quality: bE79F11 on chr=1; Num_of_Contigs=2; )
OGG1   ENSSSCG00000011549 13:55229424-55235330   CU633418,CH242-443E24,13:55210129-55267796
(Clone quality: bE443E24 on chr=13; Num_of_Contigs=9; )
OGN   ENSSSCG00000008074 3:37509843-37542028    
OGT ENSSSCG00000012403 X:57271882-57309174   FP015848,CH242-94E16,X:57261384-57311168
(Clone quality: bE94E16 on chr=X; Num_of_Contigs=6; )
OGT location ⇒ X:57275993-57276240   FP015848,CH242-94E16,X:57261384-57311168
(Clone quality: bE94E16 on chr=X; Num_of_Contigs=6; )
OGT location ⇒ X:57302153-57302406   FP015848,CH242-94E16,X:57261384-57311168
(Clone quality: bE94E16 on chr=X; Num_of_Contigs=6; )
OGT location ⇒ X:57306945-57307478   FP015848,CH242-94E16,X:57261384-57311168
(Clone quality: bE94E16 on chr=X; Num_of_Contigs=6; )
OGT location ⇒ X:57307542-57309171   FP015848,CH242-94E16,X:57261384-57311168
(Clone quality: bE94E16 on chr=X; Num_of_Contigs=6; )
OIP5   ENSSSCG00000004750 1:136468784-136475635    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-45

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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