A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IDE   ENSSSCG00000010470 14:109115163-109165581   CU468315,CH242-166E8,14:109108761-109181516
(Clone quality: bE166E8 on chr=14; Num_of_Contigs=3; )
IDH1 location ⇒ 15:104232736-104232240   CU570733,CH242-280B12,15:104214109-104237793
(Clone quality: bE280B12 on chr=15; Num_of_Contigs=4; )
IDH1 location ⇒ 15:104235229-104235066   CU570733,CH242-280B12,15:104214109-104237793
(Clone quality: bE280B12 on chr=15; Num_of_Contigs=4; )
IDH1 location ⇒ 15:104448946-104449240   CU928895,CH242-499J4,15:104425777-104454278
(Clone quality: bE499J4 on chr=15; Num_of_Contigs=10; )
IDH1 location ⇒ 15:104452492-104452564   CU928895,CH242-499J4,15:104425777-104454278
(Clone quality: bE499J4 on chr=15; Num_of_Contigs=10; )
IDH3A   ENSSSCG00000001761 7:53783614-53801181    
IDH3B   ENSSSCG00000007173 17:34565655-34570657   CU633588,CH242-437B5,17:34555708-34575692
(Clone quality: bE437B5 on chr=17; Num_of_Contigs=9; )
IDHP_PIG   ENSSSCG00000001854 7:61107888-61320540    
IDHP_PIG   ENSSSCG00000001854 7:61107888-61320540    
IDO1 ENSSSCG00000007007 17:9666698-9681681   CU927892,CH242-110P10,17:9643188-9702145
(Clone quality: bE110P10 on chr=17; Num_of_Contigs=5; )
IDS   ENSSSCG00000012731 X:119907108-119918623   CU862063,CH242-40K22,X:119905628-119922103
(Clone quality: bE40K22 on chr=X; Num_of_Contigs=6; )
IER2 ENSSSCG00000013753 2:56366058-56366723   CU914348,CH242-473F11,2:56357700-56393953
(Clone quality: bE473F11 on chr=2; Num_of_Contigs=7; )
IER3IP1   ENSSSCG00000005768 1:290525697-290527947   CU928359,CH242-451N13,1:290522561-290536111
(Clone quality: bE451N13 on chr=1; Num_of_Contigs=4; )
IF location ⇒ 8:96627518-96627642   CU463265,CH242-237G17,8:96455649-96640359
(Clone quality: bE237G17 on chr=8; Num_of_Contigs=1; )
IF location ⇒ 8:96631006-96631115   CU463265,CH242-237G17,8:96455649-96640359
(Clone quality: bE237G17 on chr=8; Num_of_Contigs=1; )
IF location ⇒ 8:96632734-96633153   CU463265,CH242-237G17,8:96455649-96640359
(Clone quality: bE237G17 on chr=8; Num_of_Contigs=1; )
IFFO1   ENSSSCG00000000695 5:60052720-60064850   CU914489,CH242-100M5,5:60050517-60080104
(Clone quality: bE100M5 on chr=5; Num_of_Contigs=13; )
IFI16 location ⇒ 4:94928972-94929107   CU462834,CH242-199I10,4:94881634-94956938
(Clone quality: bE199I10 on chr=4; Num_of_Contigs=5; )
IFI16 location ⇒ 4:94936230-94936420   CU462834,CH242-199I10,4:94881634-94956938
(Clone quality: bE199I10 on chr=4; Num_of_Contigs=5; )
IFI16 location ⇒ 4:94938494-94938833   CU462834,CH242-199I10,4:94881634-94956938
(Clone quality: bE199I10 on chr=4; Num_of_Contigs=5; )
IFI27 ENSSSCG00000002471 7:123691798-123696840   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
IFI27 location ⇒ 7:123696118-123695935   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
IFI27 location ⇒ 7:123704433-123704680   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
IFI27 location ⇒ 7:123705176-123705471   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
IFI27L2   ENSSSCG00000002472 7:123699144-123706125   CT990641,CH242-259C22,7:123630146-123710826
(Clone quality: bE259C22 on chr=7; Num_of_Contigs=4; )
IFI30 ENSSSCG00000013901 2:62403754-62407717   CU915655,CH242-228H4,2:62402408-62420097
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
IFI30 location ⇒ 2:62404931-62405116   CU915655,CH242-228H4,2:62402408-62420097
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
IFI30 location ⇒ 2:62406064-62406158   CU915655,CH242-228H4,2:62402408-62420097
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
IFI30 location ⇒ 2:62406944-62407096   CU915655,CH242-228H4,2:62402408-62420097
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
IFI30 location ⇒ 2:62407412-62407704   CU915655,CH242-228H4,2:62402408-62420097
(Clone quality: bE228H4 on chr=2; Num_of_Contigs=13; )
IFI44 ENSSSCG00000003763 6:93717437-93733560   CU633953,CH242-375H16,6:93681169-93777448
(Clone quality: bE375H16 on chr=6; Num_of_Contigs=3; )
IFI44 location ⇒ 6:93718179-93716925   CU633953,CH242-375H16,6:93681169-93777448
(Clone quality: bE375H16 on chr=6; Num_of_Contigs=3; )
IFI44 location ⇒ 6:93722021-93721846   CU633953,CH242-375H16,6:93681169-93777448
(Clone quality: bE375H16 on chr=6; Num_of_Contigs=3; )
IFI44 location ⇒ 6:93727926-93727731   CU633953,CH242-375H16,6:93681169-93777448
(Clone quality: bE375H16 on chr=6; Num_of_Contigs=3; )
IFI44 location ⇒ 6:93733184-93732730   CU633953,CH242-375H16,6:93681169-93777448
(Clone quality: bE375H16 on chr=6; Num_of_Contigs=3; )
IFIH1 ENSSSCG00000015897 15:64195271-64222185    
IFIH1 location ⇒ 15:64195330-64195618   CU928330,CH242-283H10,15:64143400-64196474
(Clone quality: bE283H10 on chr=15; Num_of_Contigs=3; )
IFIH1 location ⇒ 15:64195722-64195816   CU928330,CH242-283H10,15:64143400-64196474
(Clone quality: bE283H10 on chr=15; Num_of_Contigs=3; )
IFIH1 location ⇒ 15:64199655-64199752   CU928330,CH242-283H10,15:64196575-64204512
(Clone quality: bE283H10 on chr=15; Num_of_Contigs=3; )
IFIT1 ENSSSCG00000010453 14:106148385-106149806   CT841708,CH242-276A3,14:106051282-106204459
(Clone quality: bE276A3 on chr=14; Num_of_Contigs=2; )
IFIT1 location ⇒ 14:106138326-106138400   CT841708,CH242-276A3,14:106051282-106204459
(Clone quality: bE276A3 on chr=14; Num_of_Contigs=2; )
IFIT1 location ⇒ 14:106148388-106150257   CT841708,CH242-276A3,14:106051282-106204459
(Clone quality: bE276A3 on chr=14; Num_of_Contigs=2; )
IFIT1 location ⇒ 14:106150004-106150070   CT841708,CH242-276A3,14:106051282-106204459
(Clone quality: bE276A3 on chr=14; Num_of_Contigs=2; )
IFIT2 ENSSSCG00000010451 14:106101816-106103213   CT841708,CH242-276A3,14:106051282-106204459
(Clone quality: bE276A3 on chr=14; Num_of_Contigs=2; )
IFIT2 location ⇒ 14:148169678-148169734   CU582843,CH242-221E3,14:148168119-148196226
(Clone quality: bE221E3 on chr=14; Num_of_Contigs=12; )
IFIT2 location ⇒ 14:148284416-148284360   CU570634,CH242-125P2,14:148258618-148290105
(Clone quality: bE125P2 on chr=14; Num_of_Contigs=15; )
IFIT2 location ⇒ 14:49635447-49635394   CU468665,CH242-288F14,14:49634746-49636779
(Clone quality: bE288F14 on chr=14; Num_of_Contigs=5; )
IFIT2 location ⇒ 14:49760287-49760340   CU468977,CH242-158O5,14:49653560-49846294
(Clone quality: bE158O5 on chr=14; Num_of_Contigs=1; )
IFIT3 ENSSSCG00000010452 14:106123948-106125426   CT841708,CH242-276A3,14:106051282-106204459
(Clone quality: bE276A3 on chr=14; Num_of_Contigs=2; )
IFIT4 ENSSSCG00000010452 14:106123948-106125426   CT841708,CH242-276A3,14:106051282-106204459
(Clone quality: bE276A3 on chr=14; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

© 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team