A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
HAPLN1 location ⇒ 2:81303632-81303515   CU855516,CH242-264F14,2:81296406-81478555
(Clone quality: bE264F14 on chr=2; Num_of_Contigs=1; )
HAPLN2 ENSSSCG00000006478 4:97273615-97275865   FP102690,CH242-379E5,4:97273516-97276480
(Clone quality: bE379E5 on chr=4; Num_of_Contigs=15; )
HAPLN2 location ⇒ 4:97274162-97274265   FP102690,CH242-379E5,4:97273516-97276480
(Clone quality: bE379E5 on chr=4; Num_of_Contigs=15; )
HAPLN2 location ⇒ 4:97274453-97274570   FP102690,CH242-379E5,4:97273516-97276480
(Clone quality: bE379E5 on chr=4; Num_of_Contigs=15; )
HAPLN2 location ⇒ 4:97274700-97274884   FP102690,CH242-379E5,4:97273516-97276480
(Clone quality: bE379E5 on chr=4; Num_of_Contigs=15; )
HAPLN2 location ⇒ 4:97275282-97275465   FP102690,CH242-379E5,4:97273516-97276480
(Clone quality: bE379E5 on chr=4; Num_of_Contigs=15; )
HAPLN3 ENSSSCG00000001833 7:59897700-59899268    
HAPLN3 location ⇒ 7:59898118-59897753   CU407101,CH242-73C15,7:59895033-59898716
(Clone quality: bE73C15 on chr=7; Num_of_Contigs=17; )
HAPLN3 location ⇒ 7:59899268-59898964   CU407101,CH242-73C15,7:59898817-59901076
(Clone quality: bE73C15 on chr=7; Num_of_Contigs=17; )
HAPLN3 location ⇒ 7:59951212-59951296   CT954265,CH242-317K18,7:59912661-59952838
(Clone quality: bE317K18 on chr=7; Num_of_Contigs=2; )
HARBI1   ENSSSCG00000013258 2:14204224-14213480   FP067428,CH242-183B23,2:14139735-14217546
(Clone quality: bE183B23 on chr=2; Num_of_Contigs=2; )
HARS   ENSSSCG00000014375 2:129395970-129409654   CU459055,CH242-430O11,2:129383345-129419222
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
HARS2   ENSSSCG00000014376 2:129409696-129418662   CU459055,CH242-430O11,2:129383345-129419222
(Clone quality: bE430O11 on chr=2; Num_of_Contigs=5; )
HAS1   ENSSSCG00000003239 6:39551980-39558365   CU019573,CH242-21M5,6:39545947-39587865
(Clone quality: bE21M5 on chr=6; Num_of_Contigs=9; )
HAS2 ENSSSCG00000005992 4:17286752-17317131   CU302381,CH242-235I2,4:17213494-17395022
(Clone quality: bE235I2 on chr=4; Num_of_Contigs=1; )
HAS3 location ⇒ 15:110855392-110855267   FP102920,CH242-81G1,15:110850810-110855713
(Clone quality: bE81G1 on chr=15; Num_of_Contigs=13; )
HAT1   ENSSSCG00000015952 15:73134121-73279312    
HAUS1   ENSSSCG00000004498 1:99721314-99739732    
HAUS2   ENSSSCG00000004724 1:135046643-135138531    
HAUS3   ENSSSCG00000008685 8:536651-545747    
HAUS5   ENSSSCG00000002904 6:30293918-30305040    
HAUS6   ENSSSCG00000005173 1:212556865-212603771   CU633206,CH242-117K11,1:212551177-212716212
(Clone quality: bE117K11 on chr=1; Num_of_Contigs=2; )
HAUS8   ENSSSCG00000013871 2:61638404-61664282    
HAVCR2 ENSSSCG00000017059 16:63826199-63844419   CU972395,CH242-203E2,16:63794505-63875272
(Clone quality: bE203E2 on chr=16; Num_of_Contigs=4; )
HAX1   ENSSSCG00000006552 4:99511543-99514186   CU856218,CH242-277E7,4:99509313-99581754
(Clone quality: bE277E7 on chr=4; Num_of_Contigs=4; )
HB15 ENSSSCG00000001059 7:10571782-10589831    
HBA_PIG   ENSSSCG00000007978 3:35253063-35253941   FP102907,CH242-215K19,3:35226737-35270144
(Clone quality: bE215K19 on chr=3; Num_of_Contigs=7; )
HBB ENSSSCG00000014725 9:3969749-3971406 CU463174,CH242-513L1,9:3817424-4033403
(Clone quality: bE513L1 on chr=9; Num_of_Contigs=7; ) 		 
HBB location ⇒ 9:3970993-3970916 CU463174,CH242-513L1,9:3817424-4033403
(Clone quality: bE513L1 on chr=9; Num_of_Contigs=7; ) 		 
HBB location ⇒ 9:3987793-3987664 CU463174,CH242-513L1,9:3817424-4033403
(Clone quality: bE513L1 on chr=9; Num_of_Contigs=7; ) 		 
HBB location ⇒ 9:3989456-3989231 CU463174,CH242-513L1,9:3817424-4033403
(Clone quality: bE513L1 on chr=9; Num_of_Contigs=7; ) 		 
HBB location ⇒ 9:3989701-3989556 CU463174,CH242-513L1,9:3817424-4033403
(Clone quality: bE513L1 on chr=9; Num_of_Contigs=7; ) 		 
HBE1   ENSSSCG00000014726 9:3987667-3989648 CU463174,CH242-513L1,9:3817424-4033403
(Clone quality: bE513L1 on chr=9; Num_of_Contigs=7; ) 		 
HBEGF   ENSSSCG00000014362 2:129110881-129122606    
HBG1 ENSSSCG00000001760 7:53773239-53782420   CU467054,CH242-222N19,7:53768635-53784640
(Clone quality: bE222N19 on chr=7; Num_of_Contigs=8; )
HBM   ENSSSCG00000007977 3:35250526-35251316   FP102907,CH242-215K19,3:35226737-35270144
(Clone quality: bE215K19 on chr=3; Num_of_Contigs=7; )
HBP1 ENSSSCG00000015440 9:100154824-100182371   CU657941,CH242-371L22,9:100119257-100196501
(Clone quality: bE371L22 on chr=9; Num_of_Contigs=10; )
HBP1 location ⇒ 9:100163556-100163740   CU657941,CH242-371L22,9:100119257-100196501
(Clone quality: bE371L22 on chr=9; Num_of_Contigs=10; )
HBP1 location ⇒ 9:100165978-100166207   CU657941,CH242-371L22,9:100119257-100196501
(Clone quality: bE371L22 on chr=9; Num_of_Contigs=10; )
HBP1 location ⇒ 9:100177360-100177679   CU657941,CH242-371L22,9:100119257-100196501
(Clone quality: bE371L22 on chr=9; Num_of_Contigs=10; )
HBP1 location ⇒ 9:100181604-100182697   CU657941,CH242-371L22,9:100119257-100196501
(Clone quality: bE371L22 on chr=9; Num_of_Contigs=10; )
HBS1L   ENSSSCG00000004169 1:30518095-30607748    
HBXIP ENSSSCG00000006806 4:114175692-114176666   CU915404,CH242-292M23,4:114175313-114189900
(Clone quality: bE292M23 on chr=4; Num_of_Contigs=12; )
HBXIP ENSSSCG00000006807 4:114190407-114191587   CU915404,CH242-292M23,4:114190001-114215484
(Clone quality: bE292M23 on chr=4; Num_of_Contigs=12; )
HBZ   ENSSSCG00000007975 3:35248658-35249864   FP102907,CH242-215K19,3:35226737-35270144
(Clone quality: bE215K19 on chr=3; Num_of_Contigs=7; )
HCCS   ENSSSCG00000012111 X:6724871-6735456    
hCD48 ENSSSCG00000006379 4:93278346-93292708   CU915315,CH242-208F9,4:93261946-93408226
(Clone quality: bE208F9 on chr=4; Num_of_Contigs=2; )
hCD84 ENSSSCG00000006381 4:93381789-93570006    
HCFC1   ENSSSCG00000012793 X:122786290-122804927   CU915581,CH242-139K22,X:122729751-122810838
(Clone quality: bE139K22 on chr=X; Num_of_Contigs=13; )
HCFC2   ENSSSCG00000000846 5:75498285-75533695    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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