A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
7SK   ENSSSCG00000019517 6:106502118-106502445   CU467064,CH242-508O16,6:106458713-106521048
(Clone quality: bE508O16 on chr=6; Num_of_Contigs=3; )
7SK   ENSSSCG00000019962 4:60563420-60563747   CU469004,CH242-276D10,4:60422693-60607148
(Clone quality: bE276D10 on chr=4; Num_of_Contigs=3; )
7SK   ENSSSCG00000019567 1:174343657-174343955   CU861614,CH242-269N22,1:174238557-174402610
(Clone quality: bE269N22 on chr=1; Num_of_Contigs=1; )
7SK   ENSSSCG00000019955 1:224821898-224822225   CU571047,CH242-486G20,1:224804968-224954971
(Clone quality: bE486G20 on chr=1; Num_of_Contigs=3; )
7SK   ENSSSCG00000019845 2:65012796-65013092   CU928964,CH242-119B3,2:64983733-65020236
(Clone quality: bE119B3 on chr=2; Num_of_Contigs=7; )
7SK   ENSSSCG00000019570 9:5974290-5974607   CU855587,CH242-289J23,9:5968658-6025382
(Clone quality: bE289J23 on chr=9; Num_of_Contigs=8; )
7SK   ENSSSCG00000019711 X:30880570-30880896   CU467593,CH242-490O3,X:30873668-30897239
(Clone quality: bE490O3 on chr=X; Num_of_Contigs=4; )
7SK   ENSSSCG00000019682 14:111264047-111264370   CU468514,CH242-226D12,14:111244933-111297988
(Clone quality: bE226D12 on chr=14; Num_of_Contigs=3; )
7SK   ENSSSCG00000019679 11:68028265-68028565   CT967300,CH242-297K23,11:68027232-68050440
(Clone quality: bE297K23 on chr=11; Num_of_Contigs=8; )
7SK   ENSSSCG00000019598 7:106999330-106999616 CT823559,CH242-74B21,7:106953502-107128394
(Clone quality: bE74B21 on chr=7; Num_of_Contigs=2; ) 		 
7SK   ENSSSCG00000019609 10:28687060-28687369   CU694833,CH242-177J14,10:28658973-28746082
(Clone quality: bE177J14 on chr=10; Num_of_Contigs=6; )
7SK   ENSSSCG00000018364 1:98800594-98800887   CU041272,CH242-395M1,1:98791998-98882302
(Clone quality: bE395M1 on chr=1; Num_of_Contigs=2; )
7SK   ENSSSCG00000020025 6:85717156-85717485   FP243372,CH242-214B7,6:85602401-85790884
(Clone quality: bE214B7 on chr=6; Num_of_Contigs=2; )
7SK   ENSSSCG00000019449 9:75138385-75138704   CU929486,CH242-57G23,9:75124415-75148845
(Clone quality: bE57G23 on chr=9; Num_of_Contigs=2; )
7SK   ENSSSCG00000019890 6:63508059-63508387 CR956649,PigE-92E11,6:63451761-63579213
(No clone quality info on bT92E11) 		 
7SK   ENSSSCG00000019490 13:67907065-67907358   CU466996,CH242-441B19,13:67894096-67916934
(Clone quality: bE441B19 on chr=13; Num_of_Contigs=22; )
7SK   ENSSSCG00000019478 14:21051313-21051614   CT990598,CH242-121N10,14:21043007-21103158
(Clone quality: bE121N10 on chr=14; Num_of_Contigs=1; )
7SK   ENSSSCG00000019475 8:59211677-59212019   CU606945,CH242-230P13,8:59136498-59224831
(Clone quality: bE230P13 on chr=8; Num_of_Contigs=3; )
7SK   ENSSSCG00000019867 2:85457249-85457556   CU633367,CH242-209H18,2:85439558-85545857
(Clone quality: bE209H18 on chr=2; Num_of_Contigs=3; )
7SK   ENSSSCG00000019378 13:92710990-92711298   CU468678,CH242-91H17,13:92661635-92763742
(Clone quality: bE91H17 on chr=13; Num_of_Contigs=2; )
7SK   ENSSSCG00000019910 7:114452859-114453186 CT797459,CH242-214A4,7:114326655-114506226
(Clone quality: bE214A4 on chr=7; Num_of_Contigs=1; ) 		 
7SK   ENSSSCG00000019933 1:97266372-97266688   CU311191,CH242-364H17,1:97256659-97301164
(Clone quality: bE364H17 on chr=1; Num_of_Contigs=5; )
7SK   ENSSSCG00000019427 4:26221609-26221899   CU855989,CH242-176M4,4:26146450-26253603
(Clone quality: bE176M4 on chr=4; Num_of_Contigs=1; )
7SK   ENSSSCG00000018637 12:47813787-47814121   CU655858,CH242-208J3,12:47772347-47942311
(Clone quality: bE208J3 on chr=12; Num_of_Contigs=1; )
7SK   ENSSSCG00000019613 17:55377578-55377886 CR956403,CH242-323G23,17:55366822-55423513
(No clone quality info on bE323G23) 		 
7SK   ENSSSCG00000018215 15:65933871-65934187   CU463860,CH242-212B23,15:65914709-65942989
(Clone quality: bE212B23 on chr=15; Num_of_Contigs=11; )
7SK   ENSSSCG00000018422 1:221453725-221454050   CU407233,CH242-417D14,1:221433181-221472467
(Clone quality: bE417D14 on chr=1; Num_of_Contigs=4; )
7SK   ENSSSCG00000019816 5:91495277-91495588   CU466513,CH242-522E9,5:91488967-91506582
(Clone quality: bE522E9 on chr=5; Num_of_Contigs=8; )
7SK   ENSSSCG00000019791 7:31785335-31785635 CU407231,CH242-409K21,7:31733670-31902510
(Clone quality: bE409K21 on chr=7; Num_of_Contigs=1; ) 		 
7SK   ENSSSCG00000019767 17:57028222-57028533 CR956383,CH242-271L5,17:57000860-57161866
(No clone quality info on bE271L5) 		 
7SK   ENSSSCG00000019762 14:116442016-116442343   CU498945,CH242-300G24,14:116422902-116488573
(Clone quality: bE300G24 on chr=14; Num_of_Contigs=18; )
7SK   ENSSSCG00000019725 12:22876411-22876710   FP089505,CH242-505B8,12:22874350-22895099
(Clone quality: bE505B8 on chr=12; Num_of_Contigs=9; )
7SK   ENSSSCG00000019716 9:11403500-11403805   CU694496,CH242-254D18,9:11388727-11447609
(Clone quality: bE254D18 on chr=9; Num_of_Contigs=6; )
7SK   ENSSSCG00000018171 3:107521703-107522030   FP236375,CH242-17G19,3:107414219-107560692
(Clone quality: bE17G19 on chr=3; Num_of_Contigs=3; )
7SK   ENSSSCG00000018144 6:32089211-32089512   CU694701,CH242-276E15,6:32066842-32093230
(Clone quality: bE276E15 on chr=6; Num_of_Contigs=4; )
7SK   ENSSSCG00000019140 4:72545510-72545846   CU469445,CH242-75G21,4:72535980-72546731
(Clone quality: bE75G21 on chr=4; Num_of_Contigs=8; )
7SK   ENSSSCG00000019817 11:48695576-48695888   CU469281,CH242-121C20,11:48692711-48697791
(Clone quality: bE121C20 on chr=11; Num_of_Contigs=19; )
7SK   ENSSSCG00000019826 1:120007692-120008015   CU862036,CH242-163H16,1:120000775-120011618
(Clone quality: bE163H16 on chr=1; Num_of_Contigs=12; )
7SK   ENSSSCG00000019594 1:191425016-191425330   CU914272,CH242-335A6,1:191421611-191438300
(Clone quality: bE335A6 on chr=1; Num_of_Contigs=9; )
7SK   ENSSSCG00000019674 1:62366414-62366745   CU062418,CH242-19E4,1:62297441-62376379
(Clone quality: bE19E4 on chr=1; Num_of_Contigs=7; )
7SK   ENSSSCG00000019672 5:69956834-69957130   CU862076,CH242-88D20,5:69953012-69960222
(Clone quality: bE88D20 on chr=5; Num_of_Contigs=17; )
7SK   ENSSSCG00000018202 11:20888843-20889131   CU914205,CH242-342O8,11:20884085-20893220
(Clone quality: bE342O8 on chr=11; Num_of_Contigs=14; )
7SK   ENSSSCG00000019616 8:67690422-67690718   CU930025,CH242-53B19,8:67686830-67692832
(Clone quality: bE53B19 on chr=8; Num_of_Contigs=7; )
7SK   ENSSSCG00000019651 3:76055658-76055983   CU463162,CH242-311D23,3:76050342-76073743
(Clone quality: bE311D23 on chr=3; Num_of_Contigs=12; )
7SK   ENSSSCG00000018118 5:70046579-70046875   FP102376,CH242-133A13,5:70022488-70103306
(Clone quality: bE133A13 on chr=5; Num_of_Contigs=4; )
7SK   ENSSSCG00000018100 1:166951117-166951432   CU633716,CH242-433C2,1:166946027-166952439
(Clone quality: bE433C2 on chr=1; Num_of_Contigs=15; )
7SK   ENSSSCG00000019714 2:44355185-44355491   CU582966,CH242-198F5,2:44353756-44443659
(Clone quality: bE198F5 on chr=2; Num_of_Contigs=6; )
7SK   ENSSSCG00000019579 6:66139218-66139526   CU929769,CH242-327I15,6:66087131-66288454
(Clone quality: bE327I15 on chr=6; Num_of_Contigs=2; )
7SK   ENSSSCG00000019591 13:111009248-111009556   CU928308,CH242-172K1,13:110926954-111016391
(Clone quality: bE172K1 on chr=13; Num_of_Contigs=9; )
7SK   ENSSSCG00000018896 13:20609404-20609690   CU861970,CH242-284O24,13:20584802-20629887
(Clone quality: bE284O24 on chr=13; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-2

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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