A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
5S_rRNA   ENSSSCG00000019143 18:49964041-49964164   CU466250,CH242-226M15,18:49954670-49973122
(Clone quality: bE226M15 on chr=18; Num_of_Contigs=11; )
5S_rRNA   ENSSSCG00000018772 9:128066788-128066899   CU655938,CH242-370K12,9:128025035-128081749
(Clone quality: bE370K12 on chr=9; Num_of_Contigs=11; )
5S_rRNA   ENSSSCG00000018869 10:5590215-5590331   CU694562,CH242-205D17,10:5520160-5627678
(Clone quality: bE205D17 on chr=10; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000018860 9:48455299-48455421   CU570649,CH242-236B4,9:48417366-48467821
(Clone quality: bE236B4 on chr=9; Num_of_Contigs=9; )
5S_rRNA   ENSSSCG00000019901 14:145068079-145068188   CT737239,CH242-105M19,14:145000499-145216127
(Clone quality: bE105M19 on chr=14; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000018669 18:42419035-42419138   FP236714,CH242-296E16,18:42417740-42470027
(Clone quality: bE296E16 on chr=18; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018724 5:57137212-57137327   CU459114,CH242-375L4,5:57133326-57150177
(Clone quality: bE375L4 on chr=5; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000018714 10:12544778-12544896   FP236739,CH242-506D3,10:12543689-12572451
(Clone quality: bE506D3 on chr=10; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000018645 3:63263244-63263342   CU856063,CH242-70N7,3:63259678-63268123
(Clone quality: bE70N7 on chr=3; Num_of_Contigs=22; )
5S_rRNA   ENSSSCG00000019850 X:13699722-13699844 CU207277,CH242-186H22,X:13637952-13829937
(Clone quality: bE186H22 on chr=X; Num_of_Contigs=1; ) 		 
5S_rRNA   ENSSSCG00000019986 1:70789318-70789435   CU104757,CH242-114J14,1:70785085-70793673
(Clone quality: bE114J14 on chr=1; Num_of_Contigs=18; )
5S_rRNA   ENSSSCG00000018873 X:9954083-9954195 CU914705,CH242-281H18,X:9949795-9960269
(Clone quality: bE281H18 on chr=X; Num_of_Contigs=2; ) 		 
5S_rRNA   ENSSSCG00000019963 5:72250924-72251032   CU466396,CH242-380K13,5:72242865-72279414
(Clone quality: bE380K13 on chr=5; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000018656 18:36567678-36567779   CU468703,CH242-255N23,18:36533168-36573771
(Clone quality: bE255N23 on chr=18; Num_of_Contigs=8; )
5S_rRNA   ENSSSCG00000019724 14:110442947-110443060   CU468486,CH242-341G7,14:110410851-110483387
(Clone quality: bE341G7 on chr=14; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000019011 14:140888912-140889025 CT737217,CH242-152H1,14:140767437-141005786
(Clone quality: bE152H1 on chr=14; Num_of_Contigs=3; ) 		 
5S_rRNA   ENSSSCG00000019735 3:25033599-25033716   CU466289,CH242-213N7,3:25020934-25053223
(Clone quality: bE213N7 on chr=3; Num_of_Contigs=10; )
5S_rRNA   ENSSSCG00000018099 15:111519697-111519814   CU927906,CH242-392K13,15:111519469-111527889
(Clone quality: bE392K13 on chr=15; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000018763 7:24426547-24426657   FP085552,CH242-74M17,7:24423533-24504970
(Clone quality: bE74M17 on chr=7; Num_of_Contigs=9; )
5S_rRNA   ENSSSCG00000018619 3:100726512-100726630   CU861984,CH242-378M9,3:100694941-100744929
(Clone quality: bE378M9 on chr=3; Num_of_Contigs=9; )
5S_rRNA   ENSSSCG00000019753 12:30731742-30731860   CU640430,CH242-99N13,12:30728948-30783119
(Clone quality: bE99N13 on chr=12; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000020027 4:48800836-48800936   CU302227,CH242-291C22,4:48692340-48853344
(Clone quality: bE291C22 on chr=4; Num_of_Contigs=17; )
5S_rRNA   ENSSSCG00000018635 4:20469463-20469575 CU407229,CH242-391F13,4:20355895-20495497
(Clone quality: bE391F13 on chr=4; Num_of_Contigs=10; ) 		 
5S_rRNA   ENSSSCG00000019985 17:34858964-34859079   CU302390,CH242-286F18,17:34852729-34885871
(Clone quality: bE286F18 on chr=17; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000018909 6:62336449-62336563   CU929817,CH242-484C10,6:62311775-62390037
(Clone quality: bE484C10 on chr=6; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000018646 15:20097996-20098087   FP104535,CH242-264H5,15:20060013-20108463
(Clone quality: bE264H5 on chr=15; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000019485 1:161301581-161301703   CU618333,CH242-375P16,1:161286357-161302882
(Clone quality: bE375P16 on chr=1; Num_of_Contigs=10; )
5S_rRNA   ENSSSCG00000019504 11:24811446-24811571   CU651642,CH242-143O9,11:24770079-24860354
(Clone quality: bE143O9 on chr=11; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000018300 X:114221157-114221286 FP085527,CH242-369O10,X:114132657-114300262
(Clone quality: bE369O10 on chr=X; Num_of_Contigs=1; ) 		 
5S_rRNA   ENSSSCG00000018290 13:76287375-76287488   CU464020,CH242-82E21,13:76283083-76293246
(Clone quality: bE82E21 on chr=13; Num_of_Contigs=13; )
5S_rRNA   ENSSSCG00000019523 X:103936473-103936587   CU407163,CH242-222I6,X:103907206-103985589
(Clone quality: bE222I6 on chr=X; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000019526 12:11848828-11848919   CU694855,CH242-243O17,12:11820774-11964718
(Clone quality: bE243O17 on chr=12; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000019531 4:13519020-13519137   CU607024,CH242-40L8,4:13517404-13577311
(Clone quality: bE40L8 on chr=4; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000019559 17:14986549-14986667   CU929860,CH242-102N13,17:14974625-15028104
(Clone quality: bE102N13 on chr=17; Num_of_Contigs=15; )
5S_rRNA   ENSSSCG00000019219 4:14436045-14436163   CU633319,CH242-7G11,4:14429258-14444458
(Clone quality: bE7G11 on chr=4; Num_of_Contigs=9; )
5S_rRNA   ENSSSCG00000019215 3:20246508-20246615   FP089532,CH242-230F4,3:20223741-20247918
(Clone quality: bE230F4 on chr=3; Num_of_Contigs=9; )
5S_rRNA   ENSSSCG00000019483 6:910339-910446   FP236784,CH242-96O7,6:894272-921682
(Clone quality: bE96O7 on chr=6; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000018314 2:34169163-34169284   CU929491,CH242-96F18,2:34156976-34183470
(Clone quality: bE96F18 on chr=2; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000018332 X:114397667-114397796   FP245419,CH242-319E4,X:114375310-114409731
(Clone quality: bE319E4 on chr=X; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000019825 5:82904787-82904900   CU896600,CH242-366K23,5:82903467-82908303
(Clone quality: bE366K23 on chr=5; Num_of_Contigs=8; )
5S_rRNA   ENSSSCG00000018908 1:141166531-141166646   CU313309,CH242-369F23,1:141165272-141168465
(Clone quality: bE369F23 on chr=1; Num_of_Contigs=13; )
5S_rRNA   ENSSSCG00000019903 13:36042108-36042216   CU463970,CH242-436A11,13:36039914-36042586
(Clone quality: bE436A11 on chr=13; Num_of_Contigs=10; )
5S_rRNA   ENSSSCG00000019978 9:35307031-35307141   CU855529,CH242-371P14,9:35235190-35343456
(Clone quality: bE371P14 on chr=9; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000018647 10:29894440-29894547   FP236604,CH242-288E5,10:29877687-29916315
(Clone quality: bE288E5 on chr=10; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018655 3:59586573-59586680   CU694523,CH242-64C23,3:59584953-59587763
(Clone quality: bE64C23 on chr=3; Num_of_Contigs=16; )
5S_rRNA   ENSSSCG00000018877 12:5917990-5918095   CU466404,CH242-455N10,12:5908465-5990190
(Clone quality: bE455N10 on chr=12; Num_of_Contigs=7; )
5S_rRNA   ENSSSCG00000018895 4:93066470-93066578   CU137698,CH242-71N12,4:93050558-93067840
(Clone quality: bE71N12 on chr=4; Num_of_Contigs=19; )
5S_rRNA   ENSSSCG00000019345 16:22640399-22640519   CU695144,CH242-257F14,16:22629386-22676194
(Clone quality: bE257F14 on chr=16; Num_of_Contigs=7; )
5S_rRNA   ENSSSCG00000019476 6:7722254-7722370   FP085416,CH242-260P4,6:7710330-7729814
(Clone quality: bE260P4 on chr=6; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000019474 13:30162725-30162842   CU466421,CH242-96K10,13:30111067-30195183
(Clone quality: bE96K10 on chr=13; Num_of_Contigs=2; )
Go to records:
1-49, 50-100, 101-12

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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