A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
GRXCR1   ENSSSCG00000008804 8:28569096-28681663    
GRXCR2   ENSSSCG00000014405 2:133424661-133440120    
GSC2   ENSSSCG00000010115 14:52070048-52071285   CU618331,CH242-323M12,14:52058244-52088542
(Clone quality: bE323M12 on chr=14; Num_of_Contigs=3; )
GSDMA   ENSSSCG00000017490 12:20327274-20339380   CU928026,CH242-256H23,12:20268098-20354915
(Clone quality: bE256H23 on chr=12; Num_of_Contigs=2; )
GSDMD ENSSSCG00000006955 4:135915529-135918990   CU927913,CH242-99E21,4:135908723-135918996
(Clone quality: bE99E21 on chr=4; Num_of_Contigs=20; )
GSDMD location ⇒ 4:135917461-135917366   CU927913,CH242-99E21,4:135908723-135918996
(Clone quality: bE99E21 on chr=4; Num_of_Contigs=20; )
GSDMD location ⇒ 4:135917757-135917600   CU927913,CH242-99E21,4:135908723-135918996
(Clone quality: bE99E21 on chr=4; Num_of_Contigs=20; )
GSDMD location ⇒ 4:135918470-135918360   CU927913,CH242-99E21,4:135908723-135918996
(Clone quality: bE99E21 on chr=4; Num_of_Contigs=20; )
GSG1   ENSSSCG00000000618 5:56523781-56547634    
GSK3A   ENSSSCG00000003035 6:34370471-34380422   FP102858,CH242-504I8,6:34362915-34392170
(Clone quality: bE504I8 on chr=6; Num_of_Contigs=13; )
GSK3B ENSSSCG00000005022 1:188757144-188860228    
GSK3B ENSSSCG00000011889 13:104854597-105138252    
GSK3B ENSSSCG00000014207 2:105636958-105764708    
GSK3B ENSSSCG00000011274 13:20905977-20950024   CU861524,CH242-156J19,13:20905383-20993819
(Clone quality: bE156J19 on chr=13; Num_of_Contigs=6; )
GSK3B location ⇒ 13:104854641-104854923   CU633672,CH242-235D16,13:104763788-104940258
(Clone quality: bE235D16 on chr=13; Num_of_Contigs=2; )
GSK3B location ⇒ 13:104854959-104855068   CU633672,CH242-235D16,13:104763788-104940258
(Clone quality: bE235D16 on chr=13; Num_of_Contigs=2; )
GSK3B location ⇒ 13:104933910-104934103   CU633672,CH242-235D16,13:104763788-104940258
(Clone quality: bE235D16 on chr=13; Num_of_Contigs=2; )
GSK3B location ⇒ 13:104994754-104994947   CU464151,CH242-19K1,13:104982939-105024362
(Clone quality: bE19K1 on chr=13; Num_of_Contigs=7; )
GSN   ENSSSCG00000005515 1:274963327-274974107   CU467561,CH242-325I3,1:274962388-274998217
(Clone quality: bE325I3 on chr=1; Num_of_Contigs=7; )
GSPT1 ENSSSCG00000007893 3:28030137-28037500    
GSPT1 location ⇒ X:44619580-44617874   CU914653,CH242-266J14,X:44603199-44634134
(Clone quality: bE266J14 on chr=X; Num_of_Contigs=3; )
GSPT2   ENSSSCG00000012317 X:44618058-44619956   CU914653,CH242-266J14,X:44603199-44634134
(Clone quality: bE266J14 on chr=X; Num_of_Contigs=3; )
GSR   ENSSSCG00000015844 15:51313719-51365052    
GSS   ENSSSCG00000007287 17:40381825-40398793    
GSTA2 location ⇒ 7:135662446-135662303   CU633247,CH242-235D18,7:135661017-135664494
(Clone quality: bE235D18 on chr=7; Num_of_Contigs=14; )
GSTA2 location ⇒ 7:135688377-135688005   CU633247,CH242-235D18,7:135666805-135689039
(Clone quality: bE235D18 on chr=7; Num_of_Contigs=14; )
GSTA2 location ⇒ 7:135692788-135692699   CU633247,CH242-235D18,7:135691848-135737179
(Clone quality: bE235D18 on chr=7; Num_of_Contigs=14; )
GSTA2 location ⇒ 7:135756852-135756763   CU062466,CH242-13J19,7:135746528-135781260
(Clone quality: bE13J19 on chr=7; Num_of_Contigs=7; )
GSTA4 ENSSSCG00000002627 7:135811019-135831510    
GSTA4 location ⇒ 7:135811629-135811457   CU062466,CH242-13J19,7:135781361-135812946
(Clone quality: bE13J19 on chr=7; Num_of_Contigs=7; )
GSTA4 location ⇒ 7:135815530-135815396   CU062466,CH242-13J19,7:135813047-135829105
(Clone quality: bE13J19 on chr=7; Num_of_Contigs=7; )
GSTA4 location ⇒ 7:135817289-135817146   CU062466,CH242-13J19,7:135813047-135829105
(Clone quality: bE13J19 on chr=7; Num_of_Contigs=7; )
GSTA4 location ⇒ 7:135819104-135818970   CU062466,CH242-13J19,7:135813047-135829105
(Clone quality: bE13J19 on chr=7; Num_of_Contigs=7; )
GSTCD   ENSSSCG00000009155 8:99545592-99556976    
GSTK1   ENSSSCG00000016466 18:5991471-5997065   CU928380,CH242-107B19,18:5868328-5998133
(Clone quality: bE107B19 on chr=18; Num_of_Contigs=4; )
GSTM1 location ⇒ 13:112845586-112844919   CU468909,CH242-90M16,13:112783695-112882594
(Clone quality: bE90M16 on chr=13; Num_of_Contigs=3; )
GSTM3   ENSSSCG00000006821 4:114950692-114953674   CU861601,CH242-205N8,4:114851445-114996470
(Clone quality: bE205N8 on chr=4; Num_of_Contigs=4; )
GSTO1 ENSSSCG00000010616 14:120472214-120482638   CU468872,CH242-242L1,14:120444174-120485536
(Clone quality: bE242L1 on chr=14; Num_of_Contigs=3; )
GSTO1 ENSSSCG00000010611 14:120314308-120324732   CU041373,CH242-42A8,14:120244674-120398124
(Clone quality: bE42A8 on chr=14; Num_of_Contigs=3; )
GSTO1 location ⇒ 14:120296118-120296168   CU041373,CH242-42A8,14:120244674-120398124
(Clone quality: bE42A8 on chr=14; Num_of_Contigs=3; )
GSTO1 location ⇒ 14:120299465-120299690   CU041373,CH242-42A8,14:120244674-120398124
(Clone quality: bE42A8 on chr=14; Num_of_Contigs=3; )
GSTO1 location ⇒ 14:120300128-120300184   CU041373,CH242-42A8,14:120244674-120398124
(Clone quality: bE42A8 on chr=14; Num_of_Contigs=3; )
GSTO1 location ⇒ 14:120318589-120318814   CU041373,CH242-42A8,14:120244674-120398124
(Clone quality: bE42A8 on chr=14; Num_of_Contigs=3; )
GSTP1 ENSSSCG00000012901 2:3371610-3373995   CU856401,CH242-191A12,2:3362789-3398550
(Clone quality: bE191A12 on chr=2; Num_of_Contigs=8; )
GSTP1 ENSSSCG00000012897 2:3322668-3325045   CU856401,CH242-191A12,2:3314266-3325276
(Clone quality: bE191A12 on chr=2; Num_of_Contigs=8; )
GSTP1 location ⇒ 2:3322931-3322681   CU856401,CH242-191A12,2:3314266-3325276
(Clone quality: bE191A12 on chr=2; Num_of_Contigs=8; )
GSTP1 location ⇒ 2:3323201-3323094   CU856401,CH242-191A12,2:3314266-3325276
(Clone quality: bE191A12 on chr=2; Num_of_Contigs=8; )
GSTP1 location ⇒ 2:3324356-3324251   CU856401,CH242-191A12,2:3314266-3325276
(Clone quality: bE191A12 on chr=2; Num_of_Contigs=8; )
GSTP1 location ⇒ 2:3373796-3373967   CU856401,CH242-191A12,2:3362789-3398550
(Clone quality: bE191A12 on chr=2; Num_of_Contigs=8; )
GSTTP1   ENSSSCG00000010065 14:50826575-50833508   CU570757,CH242-95E4,14:50714738-50917166
(Clone quality: bE95E4 on chr=14; Num_of_Contigs=1; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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