A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
HSPA8 location ⇒ 9:48534217-48534148   FP102884,CH242-456G7,9:48532485-48556100
(Clone quality: bE456G7 on chr=9; Num_of_Contigs=6; )
HSPA8 location ⇒ 9:48648609-48649028   FP102884,CH242-456G7,9:48647269-48652499
(Clone quality: bE456G7 on chr=9; Num_of_Contigs=6; )
HSPA9 ENSSSCG00000014338 2:127599756-127616410    
HSPA9 location ⇒ 2:127610377-127610269   FP102255,CH242-413P24,2:127602576-127618716
(Clone quality: bE413P24 on chr=2; Num_of_Contigs=3; )
HSPA9 location ⇒ 2:127611911-127611787   FP102255,CH242-413P24,2:127602576-127618716
(Clone quality: bE413P24 on chr=2; Num_of_Contigs=3; )
HSPA9 location ⇒ 2:127612849-127612666   FP102255,CH242-413P24,2:127602576-127618716
(Clone quality: bE413P24 on chr=2; Num_of_Contigs=3; )
HSPA9 location ⇒ 2:127616360-127616223   FP102255,CH242-413P24,2:127602576-127618716
(Clone quality: bE413P24 on chr=2; Num_of_Contigs=3; )
HSPB1   ENSSSCG00000007693 3:8503238-8504685    
HSPB2 ENSSSCG00000015027 9:38494909-38495442   CU928661,CH242-297D12,9:38494720-38505071
(Clone quality: bE297D12 on chr=9; Num_of_Contigs=9; )
HSPB3   ENSSSCG00000016896 16:31113650-31114355   FP102184,CH242-340F6,16:31075234-31156416
(Clone quality: bE340F6 on chr=16; Num_of_Contigs=6; )
HSPB6   ENSSSCG00000002899 6:30177671-30179687   FP243365,CH242-219O7,6:30147881-30183141
(Clone quality: bE219O7 on chr=6; Num_of_Contigs=6; )
HSPB8   ENSSSCG00000009844 14:33635995-33648538   CU467967,CH242-123L7,14:33633564-33675204
(Clone quality: bE123L7 on chr=14; Num_of_Contigs=7; )
HSPB9   ENSSSCG00000017413 12:18369178-18369639   CU856598,CH242-362F6,12:18319906-18418389
(Clone quality: bE362F6 on chr=12; Num_of_Contigs=5; )
HSPBAP1   ENSSSCG00000011873 13:103676560-103738614    
HSPBP1   ENSSSCG00000003288 6:41270338-41275369   FP245423,CH242-507H20,6:41266387-41278265
(Clone quality: bE507H20 on chr=6; Num_of_Contigs=16; )
HSPC111 ENSSSCG00000016112 15:99584694-99585976    
HSPCA location ⇒ 11:46512144-46512177   CU928033,CH242-408E22,11:46496971-46530486
(Clone quality: bE408E22 on chr=11; Num_of_Contigs=3; )
HSPCA location ⇒ 11:46512384-46512425   CU928033,CH242-408E22,11:46496971-46530486
(Clone quality: bE408E22 on chr=11; Num_of_Contigs=3; )
HSPCA location ⇒ 11:46545592-46545625   CU914606,CH242-212M22,11:46531187-46550506
(Clone quality: bE212M22 on chr=11; Num_of_Contigs=13; )
HSPCA location ⇒ 11:46545832-46545873   CU914606,CH242-212M22,11:46531187-46550506
(Clone quality: bE212M22 on chr=11; Num_of_Contigs=13; )
HSPCA location ⇒ 2:69715815-69715582 CU915382,CH242-167E23,2:69697156-69852996
(Clone quality: bE167E23 on chr=2; Num_of_Contigs=8; ) 		 
HSPCA location ⇒ 2:69715861-69715582 CU915382,CH242-167E23,2:69697156-69852996
(Clone quality: bE167E23 on chr=2; Num_of_Contigs=8; ) 		 
HSPCA location ⇒ 7:131807880-131808154   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
HSPCA location ⇒ 7:131808426-131808764   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
HSPCA location ⇒ 7:45768289-45768410 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
HSPCA location ⇒ 7:45769101-45769222 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
HSPCA location ⇒ 7:45771330-45771421 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
HSPD1 ENSSSCG00000016077 15:94899855-94913294   CU468160,CH242-67M21,15:94885553-94940346
(Clone quality: bE67M21 on chr=15; Num_of_Contigs=2; )
HSPD1 location ⇒ 15:94900478-94900072   CU468160,CH242-67M21,15:94885553-94940346
(Clone quality: bE67M21 on chr=15; Num_of_Contigs=2; )
HSPD1 location ⇒ 15:94900760-94900579   CU468160,CH242-67M21,15:94885553-94940346
(Clone quality: bE67M21 on chr=15; Num_of_Contigs=2; )
HSPD1 location ⇒ 15:94901849-94901602   CU468160,CH242-67M21,15:94885553-94940346
(Clone quality: bE67M21 on chr=15; Num_of_Contigs=2; )
HSPD1 location ⇒ 15:94911055-94910799   CU468160,CH242-67M21,15:94885553-94940346
(Clone quality: bE67M21 on chr=15; Num_of_Contigs=2; )
HSPE1 ENSSSCG00000016078 15:94913554-94915922   CU468160,CH242-67M21,15:94885553-94940346
(Clone quality: bE67M21 on chr=15; Num_of_Contigs=2; )
HSPE1 location ⇒ 12:20212339-20212727   CU929462,CH242-284N22,12:20195514-20214672
(Clone quality: bE284N22 on chr=12; Num_of_Contigs=12; )
HSPE1 location ⇒ 12:20352195-20352583   CU928026,CH242-256H23,12:20268098-20354915
(Clone quality: bE256H23 on chr=12; Num_of_Contigs=2; )
HSPE1 location ⇒ 12:49383823-49383264   CU929524,CH242-164N17,12:49375162-49385493
(Clone quality: bE164N17 on chr=12; Num_of_Contigs=22; )
HSPG2 ENSSSCG00000003514 6:54926061-55018818    
HSPG2 location ⇒ 6:54951764-54951683   CU915824,CH242-56H10,6:54945681-54957378
(Clone quality: bE56H10 on chr=6; Num_of_Contigs=9; )
HSPG2 location ⇒ 6:54952202-54952116   CU915824,CH242-56H10,6:54945681-54957378
(Clone quality: bE56H10 on chr=6; Num_of_Contigs=9; )
HSPG2 location ⇒ 6:54952715-54952610   CU915824,CH242-56H10,6:54945681-54957378
(Clone quality: bE56H10 on chr=6; Num_of_Contigs=9; )
HSPG2 location ⇒ 6:54953044-54952825   CU915824,CH242-56H10,6:54945681-54957378
(Clone quality: bE56H10 on chr=6; Num_of_Contigs=9; )
HSPH1   ENSSSCG00000009334 11:7124693-7150241    
HTATIP2   ENSSSCG00000013349 2:36451745-36456143   CU694797,CH242-375D19,2:36445568-36464452
(Clone quality: bE375D19 on chr=2; Num_of_Contigs=10; )
HTLF ENSSSCG00000008424 3:85652585-85678793    
HTLF location ⇒ 3:85682680-85681984   CU468213,CH242-433E6,3:85657676-85713641
(Clone quality: bE433E6 on chr=3; Num_of_Contigs=6; )
HTR1A   ENSSSCG00000016940 16:40207628-40208896   CU466502,CH242-513F23,16:40154414-40304606
(Clone quality: bE513F23 on chr=16; Num_of_Contigs=2; )
HTR1B   ENSSSCG00000004475 1:93499470-93500642   CU074277,CH242-105G21,1:93486456-93538535
(Clone quality: bE105G21 on chr=1; Num_of_Contigs=8; )
HTR2A   ENSSSCG00000009406 11:19839359-20062176    
HTR2B   ENSSSCG00000016273 15:124346404-124361868    
HTR2C   ENSSSCG00000012593 X:92112232-92234107    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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