A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
HSF2 location ⇒ 1:41749313-41749165   CU972418,CH242-148G13,1:41714631-41769833
(Clone quality: bE148G13 on chr=1; Num_of_Contigs=6; )
HSF2 location ⇒ 1:41856310-41857333   FP104538,CH242-44E9,1:41852649-41860917
(Clone quality: bE44E9 on chr=1; Num_of_Contigs=16; )
HSF4 ENSSSCG00000002792 6:13393992-13399062   CU929920,CH242-351A16,6:13384865-13402282
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
HSF4 location ⇒ 6:13394309-13393994   CU929920,CH242-351A16,6:13384865-13402282
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
HSF4 location ⇒ 6:13396449-13396321   CU929920,CH242-351A16,6:13384865-13402282
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
HSF4 location ⇒ 6:13398061-13397931   CU929920,CH242-351A16,6:13384865-13402282
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
HSF4 location ⇒ 6:13399052-13398862   CU929920,CH242-351A16,6:13384865-13402282
(Clone quality: bE351A16 on chr=6; Num_of_Contigs=8; )
HSF5   ENSSSCG00000017641 12:32718628-32763578   CU681830,CH242-364G8,12:32658530-32786323
(Clone quality: bE364G8 on chr=12; Num_of_Contigs=5; )
HSH2D ENSSSCG00000013853 2:60705770-60712295   CU856246,CH242-281F10,2:60704060-60719427
(Clone quality: bE281F10 on chr=2; Num_of_Contigs=6; )
HSN2 location ⇒ 5:63861432-63862895   CU463193,CH242-251B18,5:63844856-63945660
(Clone quality: bE251B18 on chr=5; Num_of_Contigs=3; )
HSP47 ENSSSCG00000014859 9:9465586-9469980   CU467786,CH242-510E3,9:9464831-9473065
(Clone quality: bE510E3 on chr=9; Num_of_Contigs=17; )
HSP47 location ⇒ 9:9460220-9460407   CU467786,CH242-510E3,9:9438961-9464730
(Clone quality: bE510E3 on chr=9; Num_of_Contigs=17; )
HSP47 location ⇒ 9:9465782-9466017   CU467786,CH242-510E3,9:9464831-9473065
(Clone quality: bE510E3 on chr=9; Num_of_Contigs=17; )
HSP47 location ⇒ 9:9469676-9470351   CU467786,CH242-510E3,9:9464831-9473065
(Clone quality: bE510E3 on chr=9; Num_of_Contigs=17; )
HSP47 location ⇒ 9:9470431-9470698   CU467786,CH242-510E3,9:9464831-9473065
(Clone quality: bE510E3 on chr=9; Num_of_Contigs=17; )
HSP90 location ⇒ 7:131807874-131808051   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
HSP90 location ⇒ 7:131808093-131808154   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
HSP90 location ⇒ 7:131808426-131808764   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
HSP90 location ⇒ 7:131809053-131809391   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
HSP90AA1 location ⇒ 7:131807239-131807381   CU633632,CH242-139M12,7:131804530-131807502
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
HSP90AA1 location ⇒ 7:131807880-131808154   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
HSP90AA1 location ⇒ 7:131808426-131808764   CU633632,CH242-139M12,7:131807603-131831335
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
HSP90AB1 ENSSSCG00000001701 7:45765320-45771912 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
HSP90AB1 location ⇒ 7:45769712-45769895 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
HSP90AB1 location ⇒ 7:45769998-45770102 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
HSP90AB1 location ⇒ 7:45770277-45770548 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
HSP90AB1 location ⇒ 7:45771083-45771419 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
HSP90AB4P   ENSSSCG00000014096 2:74976669-74977722   CU463974,CH242-59E15,2:74960997-74984134
(Clone quality: bE59E15 on chr=2; Num_of_Contigs=11; )
HSP90B1 ENSSSCG00000000849 5:75619944-75627941   CU457468,CH242-236A7,5:75618918-75633153
(Clone quality: bE236A7 on chr=5; Num_of_Contigs=7; )
HSPA12A   ENSSSCG00000010662 14:132849615-132876621   CT943652,CH242-275L8,14:132846566-132896368
(Clone quality: bE275L8 on chr=14; Num_of_Contigs=2; )
HSPA12B   ENSSSCG00000007147 17:33555019-33569284   FP236531,CH242-39P18,17:33541632-33571733
(Clone quality: bE39P18 on chr=17; Num_of_Contigs=7; )
HSPA13   ENSSSCG00000012007 13:129059143-129068166    
HSPA14   ENSSSCG00000011051 10:44696404-44723821    
HSPA2 ENSSSCG00000002274 7:97087942-97090450 CT842159,CH242-270B4,7:97057191-97273886
(Clone quality: bE270B4 on chr=7; Num_of_Contigs=6; ) 		 
HSPA2 location ⇒ 7:97087944-97089991 CT842159,CH242-270B4,7:97057191-97273886
(Clone quality: bE270B4 on chr=7; Num_of_Contigs=6; ) 		 
HSPA2 location ⇒ 7:97090039-97090446 CT842159,CH242-270B4,7:97057191-97273886
(Clone quality: bE270B4 on chr=7; Num_of_Contigs=6; ) 		 
HSPA4 ENSSSCG00000014292 2:123256296-123299999    
HSPA4 location ⇒ 2:123297335-123297400   CU467508,CH242-144E17,2:123269293-123347431
(Clone quality: bE144E17 on chr=2; Num_of_Contigs=8; )
HSPA4 location ⇒ 2:123298747-123298911   CU467508,CH242-144E17,2:123269293-123347431
(Clone quality: bE144E17 on chr=2; Num_of_Contigs=8; )
HSPA4 location ⇒ 2:123299391-123301241   CU467508,CH242-144E17,2:123269293-123347431
(Clone quality: bE144E17 on chr=2; Num_of_Contigs=8; )
HSPA4 location ⇒ 2:123301282-123301544   CU467508,CH242-144E17,2:123269293-123347431
(Clone quality: bE144E17 on chr=2; Num_of_Contigs=8; )
HSPA4L   ENSSSCG00000009077 8:83649963-83701365    
HSPA5 ENSSSCG00000005601 1:280786767-280791205   CU041411,CH242-95A24,1:280776624-280791695
(Clone quality: bE95A24 on chr=1; Num_of_Contigs=8; )
HSPA5 ENSSSCG00000013113 2:9489357-9502016    
HSPA5 location ⇒ 1:280786711-280786773   CU041411,CH242-95A24,1:280776624-280791695
(Clone quality: bE95A24 on chr=1; Num_of_Contigs=8; )
HSPA5 location ⇒ 1:280788653-280789044   CU041411,CH242-95A24,1:280776624-280791695
(Clone quality: bE95A24 on chr=1; Num_of_Contigs=8; )
HSPA5 location ⇒ 1:280789183-280789416   CU041411,CH242-95A24,1:280776624-280791695
(Clone quality: bE95A24 on chr=1; Num_of_Contigs=8; )
HSPA5 location ⇒ 1:280790706-280791207   CU041411,CH242-95A24,1:280776624-280791695
(Clone quality: bE95A24 on chr=1; Num_of_Contigs=8; )
HSPA8 location ⇒ 9:48498153-48498222   CU570649,CH242-236B4,9:48495077-48499288
(Clone quality: bE236B4 on chr=9; Num_of_Contigs=9; )
HSPA8 location ⇒ 9:48527396-48526839   CU570649,CH242-236B4,9:48499389-48527484
(Clone quality: bE236B4 on chr=9; Num_of_Contigs=9; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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