A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
GPI location ⇒ 6:29454437-29454839   CU929776,CH242-347I7,6:29450852-29482800
(Clone quality: bE347I7 on chr=6; Num_of_Contigs=4; )
GPKOW ENSSSCG00000012291 X:42613554-42622421   FP067404,CH242-247J8,X:42575088-42641365
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
GPKOW location ⇒ X:42616457-42616330   FP067404,CH242-247J8,X:42575088-42641365
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
GPKOW location ⇒ X:42617565-42617354   FP067404,CH242-247J8,X:42575088-42641365
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
GPKOW location ⇒ X:42621220-42621086   FP067404,CH242-247J8,X:42575088-42641365
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
GPKOW location ⇒ X:42622298-42622247   FP067404,CH242-247J8,X:42575088-42641365
(Clone quality: bE247J8 on chr=X; Num_of_Contigs=5; )
GPLD1   ENSSSCG00000001089 7:20300865-20353553    
GPM6A   ENSSSCG00000015763 15:35223860-35264484    
GPM6B   ENSSSCG00000012126 X:9548279-9698322    
GPN1   ENSSSCG00000008546 3:104166217-104189679   CU972435,CH242-399O12,3:104165318-104194695
(Clone quality: bE399O12 on chr=3; Num_of_Contigs=8; )
GPN2 ENSSSCG00000003563 6:57869236-57878185   FP015947,CH242-485K18,6:57822585-57995160
(Clone quality: bE485K18 on chr=6; Num_of_Contigs=2; )
GPN2 location ⇒ 6:277308-277202   FP102614,CH242-198I21,6:276564-280310
(Clone quality: bE198I21 on chr=6; Num_of_Contigs=22; )
GPN2 location ⇒ 6:360987-361048   FP102571,CH242-151H1,6:358211-365095
(Clone quality: bE151H1 on chr=6; Num_of_Contigs=15; )
GPN2 location ⇒ 6:773986-774059   FP236784,CH242-96O7,6:743672-794744
(Clone quality: bE96O7 on chr=6; Num_of_Contigs=5; )
GPN2 location ⇒ 6:797540-797617   FP236784,CH242-96O7,6:794845-824903
(Clone quality: bE96O7 on chr=6; Num_of_Contigs=5; )
GPN3   ENSSSCG00000009820 14:31836321-31841814   CU467926,CH242-205M8,14:31834522-31850494
(Clone quality: bE205M8 on chr=14; Num_of_Contigs=11; )
GPR1   ENSSSCG00000016129 15:102237353-102238420   CU672272,CH242-171L9,15:102228790-102301997
(Clone quality: bE171L9 on chr=15; Num_of_Contigs=5; )
GPR100 ENSSSCG00000006503 4:98030467-98031588   CU151868,CH242-286M6,4:97945564-98074701
(Clone quality: bE286M6 on chr=4; Num_of_Contigs=4; )
GPR100 location ⇒ 4:98031588-98030467   CU151868,CH242-286M6,4:97945564-98074701
(Clone quality: bE286M6 on chr=4; Num_of_Contigs=4; )
GPR101   ENSSSCG00000012704 X:110002045-110003385   CU210850,CH242-390L19,X:109991584-110005828
(Clone quality: bE390L19 on chr=X; Num_of_Contigs=8; )
GPR107   ENSSSCG00000005697 1:285266142-285277225    
GPR108   ENSSSCG00000013552 2:50134152-50136720   CU681822,CH242-171H11,2:50133981-50137384
(Clone quality: bE171H11 on chr=2; Num_of_Contigs=13; )
GPR109B location ⇒ 14:30193201-30193886    
GPR109B8843 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
GPR110   ENSSSCG00000001726 7:49207053-49254415    
GPR113   ENSSSCG00000008570 3:105214529-105224631   CU862067,CH242-491P23,3:105193552-105226573
(Clone quality: bE491P23 on chr=3; Num_of_Contigs=7; )
GPR114   ENSSSCG00000002816 6:20012319-20016350   CU467555,CH242-299M23,6:20009027-20016744
(Clone quality: bE299M23 on chr=6; Num_of_Contigs=20; )
GPR116   ENSSSCG00000001725 7:49043495-49131212    
GPR119   ENSSSCG00000012661 X:105040566-105041573 FP015904,CH242-51N1,X:105017913-105050387
(Clone quality: bE51N1 on chr=X; Num_of_Contigs=2; ) 		 
GPR12   ENSSSCG00000009301 11:3484879-3485883   CU468407,CH242-264E7,11:3474563-3486784
(Clone quality: bE264E7 on chr=11; Num_of_Contigs=18; )
GPR120   ENSSSCG00000010478 14:110277009-110298541   CT954211,CH242-292E3,14:110255168-110336880
(Clone quality: bE292E3 on chr=14; Num_of_Contigs=2; )
GPR123   ENSSSCG00000010769 14:147821963-147837179    
GPR124 ENSSSCG00000015825 15:46072066-46108134   FP236525,CH242-315C20,15:46063691-46179411
(Clone quality: bE315C20 on chr=15; Num_of_Contigs=4; )
GPR125 ENSSSCG00000008753 8:13582679-13587709   FP015945,CH242-430H22,8:13582659-13599630
(Clone quality: bE430H22 on chr=8; Num_of_Contigs=7; )
GPR126   ENSSSCG00000004139 1:23888766-23941019   CU457479,CH242-63I17,1:23882958-24030754
(Clone quality: bE63I17 on chr=1; Num_of_Contigs=1; )
GPR128   ENSSSCG00000011962 13:116406783-116443388    
GPR132   ENSSSCG00000002560 7:133251403-133252506   CU695123,CH242-103I13,7:133235091-133270393
(Clone quality: bE103I13 on chr=7; Num_of_Contigs=13; )
GPR133   ENSSSCG00000009745 14:23946093-24124116    
GPR137   ENSSSCG00000013032 2:6214482-6217508   CU861533,CH242-1H13,2:6206722-6217704
(Clone quality: bE1H13 on chr=2; Num_of_Contigs=14; )
GPR137B   ENSSSCG00000010149 14:56333518-56522519    
GPR137C   ENSSSCG00000005034 1:190540173-190726039    
GPR139   ENSSSCG00000007862 3:23412308-23413243   CU929747,CH242-265G8,3:23386030-23422187
(Clone quality: bE265G8 on chr=3; Num_of_Contigs=10; )
GPR141   ENSSSCG00000016655 18:35851780-35852691   CU466952,CH242-160D13,18:35781855-35933165
(Clone quality: bE160D13 on chr=18; Num_of_Contigs=5; )
GPR143   ENSSSCG00000012103 X:5205713-5239843    
GPR144   ENSSSCG00000005591 1:280100655-280118955   CU633730,CH242-82E3,1:280090425-280133791
(Clone quality: bE82E3 on chr=1; Num_of_Contigs=5; )
GPR146   ENSSSCG00000007551 3:454247-455110    
GPR15   ENSSSCG00000011979 13:118608114-118609190   CU467089,CH242-73L22,13:118570025-118679109
(Clone quality: bE73L22 on chr=13; Num_of_Contigs=3; )
GPR150   ENSSSCG00000014140 2:82810621-82811916   FP016071,CH242-117B6,2:82778329-82845213
(Clone quality: bE117B6 on chr=2; Num_of_Contigs=5; )
GPR151   ENSSSCG00000014415 2:134023979-134025238   CU462939,CH242-319A3,2:133966245-134062926
(Clone quality: bE319A3 on chr=2; Num_of_Contigs=3; )
GPR152   ENSSSCG00000012907 2:3456129-3456956   CU633429,CH242-6G2,2:3456127-3461689
(Clone quality: bE6G2 on chr=2; Num_of_Contigs=8; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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