A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IL17F ENSSSCG00000001749 7:53194112-53195334   CT737387,CH242-301B9,7:53164546-53326569
(Clone quality: bE301B9 on chr=7; Num_of_Contigs=2; )
IL17F location ⇒ 7:53151447-53151497   CT842532,CH242-280I14,7:53095919-53164545
(Clone quality: bE280I14 on chr=7; Num_of_Contigs=4; )
IL17F location ⇒ 7:53194279-53194151   CT737387,CH242-301B9,7:53164546-53326569
(Clone quality: bE301B9 on chr=7; Num_of_Contigs=2; )
IL17RA ENSSSCG00000000765 5:65217498-65222396   CU467896,CH242-34G22,5:65212731-65224619
(Clone quality: bE34G22 on chr=5; Num_of_Contigs=20; )
IL17RA location ⇒ 5:65224720-65225525    
IL17RB ENSSSCG00000011457 13:30185246-30199813    
IL17RB location ⇒ 13:30185284-30185369   CU466421,CH242-96K10,13:30111067-30195183
(Clone quality: bE96K10 on chr=13; Num_of_Contigs=2; )
IL17RB location ⇒ 13:30188176-30188317   CU466421,CH242-96K10,13:30111067-30195183
(Clone quality: bE96K10 on chr=13; Num_of_Contigs=2; )
IL17RB location ⇒ 13:30190014-30190142   CU466421,CH242-96K10,13:30111067-30195183
(Clone quality: bE96K10 on chr=13; Num_of_Contigs=2; )
IL17RB location ⇒ 13:30190546-30190673   CU466421,CH242-96K10,13:30111067-30195183
(Clone quality: bE96K10 on chr=13; Num_of_Contigs=2; )
IL17RC ENSSSCG00000011559 13:55366120-55381913   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17RC location ⇒ 13:55366181-55366447   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17RC location ⇒ 13:55366968-55367122   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17RC location ⇒ 13:55367504-55367615   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17RC location ⇒ 13:55368841-55368930   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17RD ENSSSCG00000011463 13:32591562-32693479    
IL17RD location ⇒ 13:1004139-1004046   CU633332,CH242-130E2,13:950202-1062148
(Clone quality: bE130E2 on chr=13; Num_of_Contigs=3; )
IL17RD location ⇒ 13:1043465-1043331   CU633332,CH242-130E2,13:950202-1062148
(Clone quality: bE130E2 on chr=13; Num_of_Contigs=3; )
IL17RD location ⇒ 13:2114743-2114626   CU915680,CH242-245B17,13:2056801-2127030
(Clone quality: bE245B17 on chr=13; Num_of_Contigs=5; )
IL17RD location ⇒ 13:857218-857153   CU469190,CH242-174L4,13:848940-859496
(Clone quality: bE174L4 on chr=13; Num_of_Contigs=3; )
IL17RE ENSSSCG00000011556 13:55321269-55364966    
IL17RE location ⇒ 13:55357670-55357742   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17RE location ⇒ 13:55358960-55359028   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17RE location ⇒ 13:55360335-55360556   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17REL   ENSSSCG00000000983 5:100088314-100091259   FP102108,CH242-165O15,5:100082057-100094321
(Clone quality: bE165O15 on chr=5; Num_of_Contigs=15; )
IL18 ENSSSCG00000015037 9:38791272-38812597   CU657951,CH242-322L21,9:38781851-38831276
(Clone quality: bE322L21 on chr=9; Num_of_Contigs=9; )
IL18 location ⇒ 9:38791606-38791297   CU657951,CH242-322L21,9:38781851-38831276
(Clone quality: bE322L21 on chr=9; Num_of_Contigs=9; )
IL18 location ⇒ 9:38794179-38794040   CU657951,CH242-322L21,9:38781851-38831276
(Clone quality: bE322L21 on chr=9; Num_of_Contigs=9; )
IL18 location ⇒ 9:38796083-38795948   CU657951,CH242-322L21,9:38781851-38831276
(Clone quality: bE322L21 on chr=9; Num_of_Contigs=9; )
IL18 location ⇒ 9:38801975-38801900   CU657951,CH242-322L21,9:38781851-38831276
(Clone quality: bE322L21 on chr=9; Num_of_Contigs=9; )
IL18BP location ⇒ 9:5996329-5996537   CU855587,CH242-289J23,9:5968658-6025382
(Clone quality: bE289J23 on chr=9; Num_of_Contigs=8; )
IL18BP location ⇒ 9:5997570-5997846   CU855587,CH242-289J23,9:5968658-6025382
(Clone quality: bE289J23 on chr=9; Num_of_Contigs=8; )
IL18BP location ⇒ 9:6150568-6150292   FP102867,CH242-179D20,9:6147936-6163155
(Clone quality: bE179D20 on chr=9; Num_of_Contigs=3; )
IL18BP location ⇒ 9:6151809-6151601   FP102867,CH242-179D20,9:6147936-6163155
(Clone quality: bE179D20 on chr=9; Num_of_Contigs=3; )
IL18R1 ENSSSCG00000008158 3:47478525-47483065   FP102458,CH242-99M17,3:47400904-47486342
(Clone quality: bE99M17 on chr=3; Num_of_Contigs=2; )
IL18R1 location ⇒ 3:47478816-47478459   FP102458,CH242-99M17,3:47400904-47486342
(Clone quality: bE99M17 on chr=3; Num_of_Contigs=2; )
IL18R1 location ⇒ 3:47481957-47481797   FP102458,CH242-99M17,3:47400904-47486342
(Clone quality: bE99M17 on chr=3; Num_of_Contigs=2; )
IL18RAP ENSSSCG00000008157 3:47435344-47462772   FP102458,CH242-99M17,3:47400904-47486342
(Clone quality: bE99M17 on chr=3; Num_of_Contigs=2; )
IL18RAP location ⇒ 3:47462131-47461572   FP102458,CH242-99M17,3:47400904-47486342
(Clone quality: bE99M17 on chr=3; Num_of_Contigs=2; )
IL18RAP location ⇒ 3:47462772-47462599   FP102458,CH242-99M17,3:47400904-47486342
(Clone quality: bE99M17 on chr=3; Num_of_Contigs=2; )
IL19 ENSSSCG00000015653 9:132015434-132022474   CU655936,CH242-369P7,9:132005606-132069989
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL19 location ⇒ 9:132020587-132020661   CU655936,CH242-369P7,9:132005606-132069989
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL19 location ⇒ 9:132022379-132022443   CU655936,CH242-369P7,9:132005606-132069989
(Clone quality: bE369P7 on chr=9; Num_of_Contigs=10; )
IL1A ENSSSCG00000008090 3:39059355-39072049   CU855588,CH242-108K8,3:39033723-39081464
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1A location ⇒ 3:39060509-39059829   CU855588,CH242-108K8,3:39033723-39081464
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1A location ⇒ 3:39060509-39059829   CU855588,CH242-108K8,3:39033723-39081464
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1A location ⇒ 3:39068101-39067876   CU855588,CH242-108K8,3:39033723-39081464
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1A location ⇒ 3:39068101-39067876   CU855588,CH242-108K8,3:39033723-39081464
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1B ENSSSCG00000008088 3:38955442-38962433   CU855588,CH242-108K8,3:38948020-39033622
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
IL1B ENSSSCG00000008088 3:38955442-38962433   CU855588,CH242-108K8,3:38948020-39033622
(Clone quality: bE108K8 on chr=3; Num_of_Contigs=4; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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