A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
IL12RB2 location ⇒ 6:102223508-102222763   CU442704,CH242-111N2,6:102164133-102241390
(Clone quality: bE111N2 on chr=6; Num_of_Contigs=4; )
IL12RB2 location ⇒ 6:102245118-102244916   CU442704,CH242-111N2,6:102241491-102258898
(Clone quality: bE111N2 on chr=6; Num_of_Contigs=4; )
IL12RB2 location ⇒ 6:102253798-102253576   CU442704,CH242-111N2,6:102241491-102258898
(Clone quality: bE111N2 on chr=6; Num_of_Contigs=4; )
IL12RB2 location ⇒ 6:102286446-102286157   CU657931,CH242-314C21,6:102284031-102380313
(Clone quality: bE314C21 on chr=6; Num_of_Contigs=3; )
IL12RB23595 location ⇒ 6:33557577-33557617   FP102369,CH242-128M4,6:33522006-33560344
(Clone quality: bE128M4 on chr=6; Num_of_Contigs=3; )
IL13 ENSSSCG00000014281 2:122882661-122885131 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL13 location ⇒ 2:122882661-122882844 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL13 location ⇒ 2:122883888-122883943 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL13 location ⇒ 2:122884203-122884311 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL13 location ⇒ 2:122884685-122885131 CU468216,CH242-85C7,2:122831928-123020434
(Clone quality: bE85C7 on chr=2; Num_of_Contigs=1; ) 		 
IL13RA1 ENSSSCG00000012633 X:97193929-97240532   CU856501,CH242-141A6,X:97168964-97240549
(Clone quality: bE141A6 on chr=X; Num_of_Contigs=8; )
IL13RA1 location ⇒ X:97215061-97214925   CU856501,CH242-141A6,X:97168964-97240549
(Clone quality: bE141A6 on chr=X; Num_of_Contigs=8; )
IL13RA1 location ⇒ X:97221826-97221672   CU856501,CH242-141A6,X:97168964-97240549
(Clone quality: bE141A6 on chr=X; Num_of_Contigs=8; )
IL13RA1 location ⇒ X:97224499-97224314   CU856501,CH242-141A6,X:97168964-97240549
(Clone quality: bE141A6 on chr=X; Num_of_Contigs=8; )
IL13RA1 location ⇒ X:97234031-97233889   CU856501,CH242-141A6,X:97168964-97240549
(Clone quality: bE141A6 on chr=X; Num_of_Contigs=8; )
IL13RA2 ENSSSCG00000012594 X:92327870-92364246 CU468335,CH242-247D14,X:92311862-92443789
(Clone quality: bE247D14 on chr=X; Num_of_Contigs=4; ) 		 
IL13RA2 location ⇒ X:92338602-92338456 CU468335,CH242-247D14,X:92311862-92443789
(Clone quality: bE247D14 on chr=X; Num_of_Contigs=4; ) 		 
IL13RA2 location ⇒ X:92340324-92340171 CU468335,CH242-247D14,X:92311862-92443789
(Clone quality: bE247D14 on chr=X; Num_of_Contigs=4; ) 		 
IL13RA2 location ⇒ X:92342131-92342003 CU468335,CH242-247D14,X:92311862-92443789
(Clone quality: bE247D14 on chr=X; Num_of_Contigs=4; ) 		 
IL13RA2 location ⇒ X:92359419-92359328 CU468335,CH242-247D14,X:92311862-92443789
(Clone quality: bE247D14 on chr=X; Num_of_Contigs=4; ) 		 
IL14 location ⇒ 6:60914156-60914255   FP102820,CH242-217B19,6:60911863-60914597
(Clone quality: bE217B19 on chr=6; Num_of_Contigs=18; )
IL14 location ⇒ 6:60914762-60914970   FP102820,CH242-217B19,6:60914698-60934755
(Clone quality: bE217B19 on chr=6; Num_of_Contigs=18; )
IL14 location ⇒ 6:60915799-60916249   FP102820,CH242-217B19,6:60914698-60934755
(Clone quality: bE217B19 on chr=6; Num_of_Contigs=18; )
IL15 ENSSSCG00000009051 8:73715093-73846212    
IL15 location ⇒ 8:73715499-73715387   FP016048,CH242-99F8,8:73688960-73727936
(Clone quality: bE99F8 on chr=8; Num_of_Contigs=1; )
IL15 location ⇒ 8:73717114-73716977   FP016048,CH242-99F8,8:73688960-73727936
(Clone quality: bE99F8 on chr=8; Num_of_Contigs=1; )
IL15 location ⇒ 8:73773429-73773317   CU856106,CH242-345H15,8:73759198-73774772
(Clone quality: bE345H15 on chr=8; Num_of_Contigs=8; )
IL15 location ⇒ 8:73775220-73775083   CU856106,CH242-345H15,8:73774873-73796273
(Clone quality: bE345H15 on chr=8; Num_of_Contigs=8; )
IL16 ENSSSCG00000001787 7:56143279-56239320    
IL16 location ⇒ 7:56224630-56225742   CT954232,CH242-235B20,7:56145412-56302593
(Clone quality: bE235B20 on chr=7; Num_of_Contigs=2; )
IL16 location ⇒ 7:56227717-56227885   CT954232,CH242-235B20,7:56145412-56302593
(Clone quality: bE235B20 on chr=7; Num_of_Contigs=2; )
IL16 location ⇒ 7:56235751-56236010   CT954232,CH242-235B20,7:56145412-56302593
(Clone quality: bE235B20 on chr=7; Num_of_Contigs=2; )
IL16 location ⇒ 7:56238845-56239313   CT954232,CH242-235B20,7:56145412-56302593
(Clone quality: bE235B20 on chr=7; Num_of_Contigs=2; )
IL17 ENSSSCG00000011559 13:55366120-55381913   CU464019,CH242-82C2,13:55347452-55391174
(Clone quality: bE82C2 on chr=13; Num_of_Contigs=5; )
IL17 ENSSSCG00000001748 7:53148682-53152259   CT842532,CH242-280I14,7:53095919-53164545
(Clone quality: bE280I14 on chr=7; Num_of_Contigs=4; )
IL17 location ⇒ 7:53148682-53148764   CT842532,CH242-280I14,7:53095919-53164545
(Clone quality: bE280I14 on chr=7; Num_of_Contigs=4; )
IL17 location ⇒ 7:53149879-53150076   CT842532,CH242-280I14,7:53095919-53164545
(Clone quality: bE280I14 on chr=7; Num_of_Contigs=4; )
IL17 location ⇒ 7:53151351-53152255   CT842532,CH242-280I14,7:53095919-53164545
(Clone quality: bE280I14 on chr=7; Num_of_Contigs=4; )
IL17 location ⇒ 7:53194250-53194200   CT737387,CH242-301B9,7:53164546-53326569
(Clone quality: bE301B9 on chr=7; Num_of_Contigs=2; )
IL17A ENSSSCG00000001748 7:53148682-53152259   CT842532,CH242-280I14,7:53095919-53164545
(Clone quality: bE280I14 on chr=7; Num_of_Contigs=4; )
IL17A location ⇒ 3:36935827-36935755   CU929704,CH242-188G24,3:36929371-36944113
(Clone quality: bE188G24 on chr=3; Num_of_Contigs=20; )
IL17A location ⇒ 3:37140505-37140557   FP104556,CH242-225P24,3:37134187-37140672
(Clone quality: bE225P24 on chr=3; Note=un_improved;)
IL17B ENSSSCG00000014434 2:135993164-135997278   CU694929,CH242-55J13,2:135975430-136052686
(Clone quality: bE55J13 on chr=2; Num_of_Contigs=3; )
IL17B location ⇒ 2:135993389-135993164   CU694929,CH242-55J13,2:135975430-136052686
(Clone quality: bE55J13 on chr=2; Num_of_Contigs=3; )
IL17B location ⇒ 2:135993583-135993452   CU694929,CH242-55J13,2:135975430-136052686
(Clone quality: bE55J13 on chr=2; Num_of_Contigs=3; )
IL17B location ⇒ 2:135995142-135994933   CU694929,CH242-55J13,2:135975430-136052686
(Clone quality: bE55J13 on chr=2; Num_of_Contigs=3; )
IL17D ENSSSCG00000009272 11:176082-258484    
IL17D location ⇒ 11:258235-258684   CU633720,CH242-500J7,11:250608-261346
(No clone quality info on )
IL17E location ⇒ 7:82103040-82103384   CU633625,CH242-116C14,7:82041923-82116183
(Clone quality: bE116C14 on chr=7; Num_of_Contigs=8; )
IL17E location ⇒ 7:82203786-82203442   CU467584,CH242-430E12,7:82202532-82223278
(Clone quality: bE430E12 on chr=7; Num_of_Contigs=18; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-900, 901-950, 951-1000, 1001-1050, 1051-1100, 1101-33

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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