A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
HNT location ⇒ 9:57276350-57276219   CU464171,CH242-497F1,9:57253475-57327229
(Clone quality: bE497F1 on chr=9; Num_of_Contigs=5; )
HNT location ⇒ 9:57635282-57635500   CU928985,CH242-36C17,9:57624452-57658792
(Clone quality: bE36C17 on chr=9; Num_of_Contigs=8; )
HOMER1   ENSSSCG00000014113 2:77282786-77355575    
HOMER2   ENSSSCG00000001804 7:58045433-58139101 CT943649,CH242-264A9,7:58033289-58209667
(Clone quality: bE264A9 on chr=7; Num_of_Contigs=4; ) 		 
HOMER3   ENSSSCG00000013925 2:63097557-63106025   CU640483,CH242-64G8,2:63053243-63184458
(Clone quality: bE64G8 on chr=2; Num_of_Contigs=8; )
HOOK1   ENSSSCG00000003826 6:107855469-107927017   CU928388,CH242-18L17,6:107790494-107938282
(Clone quality: bE18L17 on chr=6; Num_of_Contigs=3; )
HOOK2   ENSSSCG00000013734 2:56034478-56046548   CU914382,CH242-275M24,2:56025074-56111468
(Clone quality: bE275M24 on chr=2; Num_of_Contigs=7; )
HOPX   ENSSSCG00000008898 8:46997795-47003296   CU655892,CH242-128A5,8:46995478-47016127
(Clone quality: bE128A5 on chr=8; Num_of_Contigs=5; )
HORMAD1   ENSSSCG00000006649 4:102400222-102419707   CU655899,CH242-160A10,4:102356903-102440553
(Clone quality: bE160A10 on chr=4; Num_of_Contigs=7; )
HORMAD2   ENSSSCG00000009995 14:47853415-47876819   CT943654,CH242-315D3,14:47773841-47931257
(Clone quality: bE315D3 on chr=14; Num_of_Contigs=1; )
HOXA1 ENSSSCG00000016707 18:44279144-44280635   CU570959,CH242-5D15,18:44261153-44388224
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA10 ENSSSCG00000016699 18:44203158-44203439   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA10 location ⇒ 18:44177111-44177411   CU480612,CH242-239C23,18:44175678-44192293
(Clone quality: bE239C23 on chr=18; Num_of_Contigs=6; )
HOXA10 location ⇒ 18:44178392-44178749   CU480612,CH242-239C23,18:44175678-44192293
(Clone quality: bE239C23 on chr=18; Num_of_Contigs=6; )
HOXA10 location ⇒ 18:44203163-44203463   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA10 location ⇒ 18:44204444-44204801   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA11   ENSSSCG00000016698 18:44173309-44192477    
HOXA13 ENSSSCG00000016697 18:44158353-44159961   CU480612,CH242-239C23,18:44158152-44163182
(Clone quality: bE239C23 on chr=18; Num_of_Contigs=6; )
HOXA2   ENSSSCG00000016706 18:44272543-44274358   CU570959,CH242-5D15,18:44261153-44388224
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA3 ENSSSCG00000016705 18:44264398-44267091   CU570959,CH242-5D15,18:44261153-44388224
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA4 ENSSSCG00000016704 18:44244938-44246486   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA4 location ⇒ 18:44220418-44220277   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA4 location ⇒ 18:44229744-44229612   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA4 location ⇒ 18:44245574-44245426   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA4 location ⇒ 18:44246423-44246126   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA5 ENSSSCG00000016703 18:44231847-44233815   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA5 location ⇒ 18:44233957-44233704   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA5 location ⇒ 18:44234358-44233992   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA6   ENSSSCG00000016702 18:44227757-44229811   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA7   ENSSSCG00000016701 18:44218811-44220665   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXA9 ENSSSCG00000016700 18:44209962-44212217   CU570959,CH242-5D15,18:44192294-44261052
(Clone quality: bE5D15 on chr=18; Num_of_Contigs=2; )
HOXB1   ENSSSCG00000017532 12:22340487-22341912    
HOXB13   ENSSSCG00000017541 12:22502214-22504163   CU856160,CH242-281F13,12:22486827-22540378
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB2   ENSSSCG00000017533 12:22352842-22354718   CU856160,CH242-281F13,12:22349854-22360922
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB3 ENSSSCG00000017534 12:22360263-22362548    
HOXB4 ENSSSCG00000017535 12:22386313-22387898   CU856160,CH242-281F13,12:22361023-22389804
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB5   ENSSSCG00000017540 12:22473565-22475071   CU856160,CH242-281F13,12:22470499-22486726
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB6 ENSSSCG00000017539 12:22469246-22470904    
HOXB6 location ⇒ 12:22468895-22469422   CU856160,CH242-281F13,12:22389905-22470398
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB6 location ⇒ 12:22469483-22469669   CU856160,CH242-281F13,12:22389905-22470398
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB7 ENSSSCG00000017538 12:22456713-22460172   CU856160,CH242-281F13,12:22389905-22470398
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB8   ENSSSCG00000017537 12:22452717-22454480   CU856160,CH242-281F13,12:22389905-22470398
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXB9   ENSSSCG00000017536 12:22441194-22444602   CU856160,CH242-281F13,12:22389905-22470398
(Clone quality: bE281F13 on chr=12; Num_of_Contigs=6; )
HOXC12   ENSSSCG00000000281 5:17543863-17545482   CU861633,CH242-441M17,5:17539591-17546659
(Clone quality: bE441M17 on chr=5; Num_of_Contigs=11; )
HOXC4 ENSSSCG00000000285 5:17912668-17913955   CU633419,CH242-45O15,5:17888388-17919531
(Clone quality: bE45O15 on chr=5; Num_of_Contigs=9; )
HOXC5   ENSSSCG00000000286 5:17932916-17934404   CU633419,CH242-45O15,5:17919632-17935223
(Clone quality: bE45O15 on chr=5; Num_of_Contigs=9; )
HOXD1   ENSSSCG00000015986 15:77097042-77098346   CU570829,CH242-243K13,15:77040738-77185013
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
HOXD10   ENSSSCG00000015981 15:77026997-77029400   CU570829,CH242-243K13,15:77017989-77040637
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
HOXD11   ENSSSCG00000015978 15:76952831-77019544    
HOXD12   ENSSSCG00000015980 15:77010069-77011031   CU570829,CH242-243K13,15:76998439-77017888
(Clone quality: bE243K13 on chr=15; Num_of_Contigs=3; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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