A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
GNLY ENSSSCG00000008228 3:53909861-53914687   CU928286,CH242-219K12,3:53893300-53963482
(Clone quality: bE219K12 on chr=3; Num_of_Contigs=4; )
GNLY location ⇒ 3:53910947-53911056   CU928286,CH242-219K12,3:53893300-53963482
(Clone quality: bE219K12 on chr=3; Num_of_Contigs=4; )
GNLY location ⇒ 3:53911515-53911620   CU928286,CH242-219K12,3:53893300-53963482
(Clone quality: bE219K12 on chr=3; Num_of_Contigs=4; )
GNLY location ⇒ 3:53913118-53913290   CU928286,CH242-219K12,3:53893300-53963482
(Clone quality: bE219K12 on chr=3; Num_of_Contigs=4; )
GNLY location ⇒ 3:53914511-53914680   CU928286,CH242-219K12,3:53893300-53963482
(Clone quality: bE219K12 on chr=3; Num_of_Contigs=4; )
GNMT   ENSSSCG00000001652 7:43885306-43888344 CR956379,CH242-196P11,7:43779717-43958428
(No clone quality info on bE196P11) 		 
GNPAT   ENSSSCG00000010175 14:61535896-61568511    
GNPDA1   ENSSSCG00000014393 2:130410117-130420899   FP102264,CH242-59H11,2:130351429-130495395
(Clone quality: bE59H11 on chr=2; Num_of_Contigs=3; )
GNPDA2   ENSSSCG00000008808 8:30051046-30076258    
GNPNAT1 ENSSSCG00000005040 1:190877954-190890556   CU407115,CH242-342H5,1:190778660-191001332
(Clone quality: bE342H5 on chr=1; Num_of_Contigs=1; )
GNPNAT1 location ⇒ 15:123617866-123618883   CU683888,CH242-406J22,15:123588967-123625012
(Clone quality: bE406J22 on chr=15; Num_of_Contigs=8; )
GNPTAB   ENSSSCG00000000862 5:77812203-77836048   CU928944,CH242-147F20,5:77802229-77841232
(Clone quality: bE147F20 on chr=5; Num_of_Contigs=9; )
GNPTG   ENSSSCG00000008031 3:36242649-36244181   CU467714,CH242-272G6,3:36227225-36246534
(Clone quality: bE272G6 on chr=3; Num_of_Contigs=16; )
GNRH1 ENSSSCG00000009651 14:9550047-9565298    
GNRH1 location ⇒ 14:9560909-9560745   CU639434,CH242-499F19,14:9550407-9599146
(Clone quality: bE499F19 on chr=14; Num_of_Contigs=9; )
GNRH1 location ⇒ 14:9563323-9563225   CU639434,CH242-499F19,14:9550407-9599146
(Clone quality: bE499F19 on chr=14; Num_of_Contigs=9; )
GNRH1 location ⇒ 14:9565298-9565158   CU639434,CH242-499F19,14:9550407-9599146
(Clone quality: bE499F19 on chr=14; Num_of_Contigs=9; )
GNRH2   ENSSSCG00000007159 17:34047064-34206128    
GNRHR ENSSSCG00000008925 8:56428769-56438964   CU693386,CH242-147H8,8:56356823-56535114
(Clone quality: bE147H8 on chr=8; Num_of_Contigs=1; )
GNRHR2   ENSSSCG00000006685 4:103495413-103499753    
GOLGA1   ENSSSCG00000005597 1:280493609-280542993    
GOLGA3   ENSSSCG00000009733 14:22428405-22472182   CU468405,CH242-25J16,14:22359876-22472183
(Clone quality: bE25J16 on chr=14; Num_of_Contigs=2; )
GOLGA4 ENSSSCG00000011243 13:18265992-18370560    
GOLGA5   ENSSSCG00000002455 7:122379060-122412679   CU468886,CH242-145B2,7:122356408-122435919
(Clone quality: bE145B2 on chr=7; Num_of_Contigs=2; )
GOLGA7   ENSSSCG00000007015 17:10621404-10636532    
GOLGB1   ENSSSCG00000011882 13:104289968-104381181    
GOLIM4 ENSSSCG00000011741 13:81852957-81889106   CU855540,CH242-517H8,13:81845733-81901022
(Clone quality: bE517H8 on chr=13; Num_of_Contigs=7; )
Golim4 ENSSSCG00000011741 13:81852957-81889106   CU855540,CH242-517H8,13:81845733-81901022
(Clone quality: bE517H8 on chr=13; Num_of_Contigs=7; )
Golim4 location ⇒ 13:81851720-81851420   CU855540,CH242-517H8,13:81845733-81901022
(Clone quality: bE517H8 on chr=13; Num_of_Contigs=7; )
Golim4 location ⇒ 13:81866514-81866455   CU855540,CH242-517H8,13:81845733-81901022
(Clone quality: bE517H8 on chr=13; Num_of_Contigs=7; )
Golim4 location ⇒ 13:81886249-81886195   CU855540,CH242-517H8,13:81845733-81901022
(Clone quality: bE517H8 on chr=13; Num_of_Contigs=7; )
Golim4 location ⇒ 13:81990574-81990766   CU855540,CH242-517H8,13:81976180-82020682
(Clone quality: bE517H8 on chr=13; Num_of_Contigs=7; )
GOLM1   ENSSSCG00000010955 10:27967370-28221966    
GOLPH3 ENSSSCG00000016807 16:15598433-15599711   CU633306,CH242-511N14,16:15583435-15602786
(Clone quality: bE511N14 on chr=16; Num_of_Contigs=10; )
GOLPH3 location ⇒ 16:15598775-15598318   CU633306,CH242-511N14,16:15583435-15602786
(Clone quality: bE511N14 on chr=16; Num_of_Contigs=10; )
GOLPH3 location ⇒ 16:16148327-16146413   CU914459,CH242-229A22,16:16143915-16157540
(Clone quality: bE229A22 on chr=16; Num_of_Contigs=24; )
GOLPH3 location ⇒ 16:16164577-16164714   CU914459,CH242-229A22,16:16162940-16170435
(Clone quality: bE229A22 on chr=16; Num_of_Contigs=24; )
GOLPH3 location ⇒ 16:16169493-16169915   CU914459,CH242-229A22,16:16162940-16170435
(Clone quality: bE229A22 on chr=16; Num_of_Contigs=24; )
GOLPH3L   ENSSSCG00000006650 4:102420842-102458855    
GOLT1A   ENSSSCG00000015279 9:62365363-62440832    
GOLT1B   ENSSSCG00000000579 5:49940350-49949971    
GOPC   ENSSSCG00000004253 1:46179458-46223177   CU694620,CH242-40E16,1:46176101-46306057
(Clone quality: bE40E16 on chr=1; Num_of_Contigs=3; )
GORAB   ENSSSCG00000006280 4:83628921-83642809   CU137739,CH242-82B23,4:83628920-83671619
(Clone quality: bE82B23 on chr=4; Num_of_Contigs=13; )
GORASP1   ENSSSCG00000011262 13:19712503-19722455   CU856480,CH242-203F12,13:19659552-19771103
(Clone quality: bE203F12 on chr=13; Num_of_Contigs=3; )
GORASP2   ENSSSCG00000015943 15:72286554-72301194   CU467507,CH242-13I7,15:72286336-72466164
(Clone quality: bE13I7 on chr=15; Num_of_Contigs=1; )
GOSR1   ENSSSCG00000017800 12:44477579-44529680   FP102529,CH242-9D9,12:44372175-44547741
(Clone quality: bE9D9 on chr=12; Num_of_Contigs=1; )
GOSR2   ENSSSCG00000017319 12:15638334-15657317   CU915446,CH242-121J19,12:15622934-15679633
(Clone quality: bE121J19 on chr=12; Num_of_Contigs=10; )
GOT1   ENSSSCG00000010537 14:115310483-115395994    
GOT1L1   ENSSSCG00000015822 15:45997228-46004106    
GOT2   ENSSSCG00000002797 6:19143874-19152786    
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-750, 751-800, 801-850, 851-25

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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