A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
WAC   ENSSSCG00000011013 10:38113075-38150404   CU570822,CH242-194F17,10:38066387-38182227
(Clone quality: bE194F17 on chr=10; Num_of_Contigs=3; )
WAPAL   ENSSSCG00000010357 14:91185345-91349827    
WAP_PIG   ENSSSCG00000016731 18:48823441-48825425    
WASF1 ENSSSCG00000004404 1:79895633-79917595    
WASF1 location ⇒ 1:79895902-79895632   CU915312,CH242-178O17,1:79895530-79904467
(Clone quality: bE178O17 on chr=1; Num_of_Contigs=6; )
WASF2 ENSSSCG00000003577 6:58292894-58403944    
WASF2 location ⇒ 6:58292580-58292310   CU466983,CH242-5M3,6:58217448-58296419
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
WASF2 location ⇒ 6:58296903-58296734   CU466983,CH242-5M3,6:58296520-58303757
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
WASF2 location ⇒ 6:58298817-58298661   CU466983,CH242-5M3,6:58296520-58303757
(Clone quality: bE5M3 on chr=6; Num_of_Contigs=5; )
WASF2 location ⇒ 6:58314708-58314532   CU469239,CH242-509G5,6:58311705-58318431
(Clone quality: bE509G5 on chr=6; Num_of_Contigs=22; )
WASF3 ENSSSCG00000009300 11:3400494-3425880   CU856270,CH242-441I10,11:3390529-3426554
(Clone quality: bE441I10 on chr=11; Num_of_Contigs=13; )
WASF3 location ⇒ 11:3400492-3400877   CU856270,CH242-441I10,11:3390529-3426554
(Clone quality: bE441I10 on chr=11; Num_of_Contigs=13; )
WASL ENSSSCG00000017479 12:20006236-20047678    
WASL ENSSSCG00000016685 18:41399669-41461014    
WASL ENSSSCG00000016604 18:21875330-21940575 CU442752,CH242-52J8,18:21802381-21975792
(Clone quality: bE52J8 on chr=18; Num_of_Contigs=4; ) 		 
WASL location ⇒ 18:21874829-21875221 CU442752,CH242-52J8,18:21802381-21975792
(Clone quality: bE52J8 on chr=18; Num_of_Contigs=4; ) 		 
WASL location ⇒ 18:21875283-21875788 CU442752,CH242-52J8,18:21802381-21975792
(Clone quality: bE52J8 on chr=18; Num_of_Contigs=4; ) 		 
WASL location ⇒ 18:21906899-21907035 CU442752,CH242-52J8,18:21802381-21975792
(Clone quality: bE52J8 on chr=18; Num_of_Contigs=4; ) 		 
WASL location ⇒ 18:21921297-21921396 CU442752,CH242-52J8,18:21802381-21975792
(Clone quality: bE52J8 on chr=18; Num_of_Contigs=4; ) 		 
WASPIP location ⇒ 15:75465288-75464646   CU463892,CH242-430I1,15:75462195-75465554
(Clone quality: bE430I1 on chr=15; Num_of_Contigs=9; )
WBP1   ENSSSCG00000008273 3:62943311-63274789    
WBP11   ENSSSCG00000000611 5:55056963-55063481   CU463008,CH242-511E2,5:55026707-55063558
(Clone quality: bE511E2 on chr=5; Num_of_Contigs=3; )
WBP2 ENSSSCG00000000041 5:2939972-2963636 BX296515,PigE-121D21,5:2907737-3087427
(Clone quality: bT121D21 on chr=5; Num_of_Contigs=8; ) 		 
WBP2 location ⇒ 12:3922370-3922504   CU928029,CH242-304M1,12:3894544-3957078
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
WBP2 location ⇒ 12:3922713-3922836   CU928029,CH242-304M1,12:3894544-3957078
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
WBP2 location ⇒ 12:3923408-3923466   CU928029,CH242-304M1,12:3894544-3957078
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
WBP2 location ⇒ 12:3924312-3924457   CU928029,CH242-304M1,12:3894544-3957078
(Clone quality: bE304M1 on chr=12; Num_of_Contigs=9; )
WBP4   ENSSSCG00000009439 11:24722931-24759677   CU651642,CH242-143O9,11:24711350-24769978
(Clone quality: bE143O9 on chr=11; Num_of_Contigs=5; )
WBP5   ENSSSCG00000012527 X:81947425-81947739   FP101968,CH242-59P14,X:81832034-81955406
(Clone quality: bE59P14 on chr=X; Num_of_Contigs=3; )
WBSCR16   ENSSSCG00000007724 3:10027062-10032253    
WBSCR17   ENSSSCG00000007728 3:13647572-13908551    
WBSCR22   ENSSSCG00000007713 3:9280981-9294062   CU655977,CH242-166N19,3:9275764-9314897
(Clone quality: bE166N19 on chr=3; Num_of_Contigs=8; )
WBSCR27   ENSSSCG00000007717 3:9378284-9381257    
WBSCR28   ENSSSCG00000007716 3:9357603-9359945   CU915481,CH242-313A3,3:9356293-9367173
(Clone quality: bE313A3 on chr=3; Num_of_Contigs=10; )
WDFY3   ENSSSCG00000009230 8:114890629-115137885    
WDFY4   ENSSSCG00000010383 14:93192845-93453553    
WDHD1   ENSSSCG00000005052 1:192872559-192933560   CU480474,CH242-104E15,1:192795606-192935257
(Clone quality: bE104E15 on chr=1; Num_of_Contigs=4; )
WDR12   ENSSSCG00000016116 15:99968826-99993305    
WDR16   ENSSSCG00000017994 12:51608482-51628321    
WDR17   ENSSSCG00000015766 15:35611028-35659232   CU929806,CH242-45C6,15:35610411-35680760
(Clone quality: bE45C6 on chr=15; Num_of_Contigs=7; )
WDR18   ENSSSCG00000013423 2:46257013-46262889   FP015903,CH242-504E7,2:46250044-46271318
(Clone quality: bE504E7 on chr=2; Num_of_Contigs=12; )
WDR19   ENSSSCG00000008789 8:26034780-26075001    
WDR20 ENSSSCG00000002533 7:131696410-131752959    
WDR20 location ⇒ 7:131697687-131695768   CU915721,CH242-9K5,7:131688899-131745393
(Clone quality: bE9K5 on chr=7; Num_of_Contigs=5; )
WDR20 location ⇒ 7:131708507-131708323   CU915721,CH242-9K5,7:131688899-131745393
(Clone quality: bE9K5 on chr=7; Num_of_Contigs=5; )
WDR20 location ⇒ 7:131752907-131752628   CU633632,CH242-139M12,7:131745394-131763343
(Clone quality: bE139M12 on chr=7; Num_of_Contigs=22; )
WDR23   ENSSSCG00000002008 7:81512763-81521299   CT961055,CH242-32K2,7:81442434-81553552
(Clone quality: bE32K2 on chr=7; Num_of_Contigs=2; )
WDR24   ENSSSCG00000008007 3:35745182-35749713   FP016225,CH242-86N4,3:35744365-35749774
(Clone quality: bE86N4 on chr=3; Num_of_Contigs=9; )
WDR25   ENSSSCG00000002517 7:130571055-130571873   CU896696,CH242-232N15,7:130555674-130578106
(Clone quality: bE232N15 on chr=7; Num_of_Contigs=5; )
Go to records:
1-49, 50-100, 101-150, 151-200

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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