A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
H1F0   ENSSSCG00000000123 5:6584621-6585177    
H1FNT   ENSSSCG00000000820 5:73913389-73914105   CU694689,CH242-229I7,5:73898843-73928932
(Clone quality: bE229I7 on chr=5; Num_of_Contigs=8; )
H1FOO   ENSSSCG00000011591 13:57430882-57433338   CU463955,CH242-210P17,13:57404193-57472210
(Clone quality: bE210P17 on chr=13; Num_of_Contigs=5; )
H1FX   ENSSSCG00000011613 13:59249206-59249850   CU928115,CH242-63I22,13:59241535-59249898
(Clone quality: bE63I22 on chr=13; Num_of_Contigs=9; )
H1T_PIG   ENSSSCG00000001122 7:21963940-21964578   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
H1T_PIG   ENSSSCG00000001144 7:22188480-22189118   CU466447,CH242-214G3,7:22164394-22211337
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
H2AFJ location ⇒ 7:21977918-21978246   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
H2AFJ location ⇒ 7:22202461-22202789   CU466447,CH242-214G3,7:22164394-22211337
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
H2AFJ location ⇒ 7:22898253-22898623   CU407097,CH242-5B5,7:22886090-22899889
(Clone quality: bE5B5 on chr=7; Num_of_Contigs=4; )
H2AFJ location ⇒ 7:22912007-22911637   CU407097,CH242-5B5,7:22905191-22930540
(Clone quality: bE5B5 on chr=7; Num_of_Contigs=4; )
H2AFV   ENSSSCG00000016738 18:49063850-49072442   CU855998,CH242-199O17,18:49044973-49077300
(Clone quality: bE199O17 on chr=18; Num_of_Contigs=20; )
H2AFY   ENSSSCG00000014307 2:124914988-124996032   CU467703,CH242-237A15,2:124911821-124999817
(Clone quality: bE237A15 on chr=2; Num_of_Contigs=4; )
H2AFY2   ENSSSCG00000010257 14:75942650-75995076    
H2AFZ   ENSSSCG00000009178 8:103369419-103370827   FP089503,CH242-496N9,8:103367625-103371003
(Clone quality: bE496N9 on chr=8; Num_of_Contigs=4; )
H3F3B   ENSSSCG00000017202 12:3983032-3986455 CU928968,CH242-19M24,12:3978819-4017836
(Clone quality: bE19M24 on chr=12; Num_of_Contigs=4; ) 		 
H4_PIG   ENSSSCG00000001177 7:22904244-22904555   CU407097,CH242-5B5,7:22899990-22905090
(Clone quality: bE5B5 on chr=7; Num_of_Contigs=4; )
H4_PIG   ENSSSCG00000001143 7:22186228-22186539   CU466447,CH242-214G3,7:22164394-22211337
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
H4_PIG   ENSSSCG00000006675 4:103217879-103218187   CU462833,CH242-167L20,4:103208937-103337851
(Clone quality: bE167L20 on chr=4; Num_of_Contigs=2; )
H4_PIG   ENSSSCG00000001113 7:21909496-21909807   CT797471,CH242-54M14,7:21795511-21989531
(Clone quality: bE54M14 on chr=7; Num_of_Contigs=1; )
H4_PIG   ENSSSCG00000001172 7:22878004-22878315   CU041316,CH242-47D17,7:22710800-22886089
(Clone quality: bE47D17 on chr=7; Num_of_Contigs=1; )
H4_PIG   ENSSSCG00000001168 7:22866145-22866456   CU041316,CH242-47D17,7:22710800-22886089
(Clone quality: bE47D17 on chr=7; Num_of_Contigs=1; )
H4_PIG   ENSSSCG00000001124 7:21995500-21995808   CU466447,CH242-214G3,7:21994532-22003775
(Clone quality: bE214G3 on chr=7; Num_of_Contigs=15; )
HAAO   ENSSSCG00000008463 3:91110164-91124472   CU466235,CH242-296E13,3:91108893-91127502
(Clone quality: bE296E13 on chr=3; Num_of_Contigs=12; )
HABP2 ENSSSCG00000010639 14:129765308-129799912   CU571297,CH242-430H6,14:129740766-129818795
(Clone quality: bE430H6 on chr=14; Num_of_Contigs=2; )
HABP2 location ⇒ 14:129793178-129793421   CU571297,CH242-430H6,14:129740766-129818795
(Clone quality: bE430H6 on chr=14; Num_of_Contigs=2; )
HABP2 location ⇒ 14:129794625-129794767   CU571297,CH242-430H6,14:129740766-129818795
(Clone quality: bE430H6 on chr=14; Num_of_Contigs=2; )
HABP2 location ⇒ 14:129795982-129796118   CU571297,CH242-430H6,14:129740766-129818795
(Clone quality: bE430H6 on chr=14; Num_of_Contigs=2; )
HABP2 location ⇒ 14:129797115-129797264   CU571297,CH242-430H6,14:129740766-129818795
(Clone quality: bE430H6 on chr=14; Num_of_Contigs=2; )
HABP4   ENSSSCG00000010934 10:25144094-25177987    
HACE1   ENSSSCG00000004364 1:74517062-74751296    
HACL1   ENSSSCG00000011192 13:2206844-2258213    
HADH   ENSSSCG00000009150 8:97786277-97839291   CU463204,CH242-487A14,8:97767700-97882787
(Clone quality: bE487A14 on chr=8; Num_of_Contigs=2; )
HADHA   ENSSSCG00000008571 3:105296674-105341814    
HADHB   ENSSSCG00000008569 3:105193660-105205889   CU862067,CH242-491P23,3:105193552-105226573
(Clone quality: bE491P23 on chr=3; Num_of_Contigs=7; )
HAGHL   ENSSSCG00000008003 3:35709347-35712386   FP016225,CH242-86N4,3:35707195-35730781
(Clone quality: bE86N4 on chr=3; Num_of_Contigs=9; )
HAL   ENSSSCG00000000892 5:82543142-82566764    
Hammerhead_1   ENSSSCG00000018976 5:58879000-58879044   CU928410,CH242-273D7,5:58872346-58901639
(Clone quality: bE273D7 on chr=5; Num_of_Contigs=2; )
HAMP ENSSSCG00000002886 6:30040194-30041642   CU694505,CH242-50N19,6:30028872-30044834
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
HAMP location ⇒ 6:30040196-30040337   CU694505,CH242-50N19,6:30028872-30044834
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
HAMP location ⇒ 6:30041293-30041355   CU694505,CH242-50N19,6:30028872-30044834
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
HAMP location ⇒ 6:30041441-30041638   CU694505,CH242-50N19,6:30028872-30044834
(Clone quality: bE50N19 on chr=6; Num_of_Contigs=14; )
HAND1   ENSSSCG00000017070 16:66028575-66029685   FP102668,CH242-292L19,16:66012621-66029767
(Clone quality: bE292L19 on chr=16; Num_of_Contigs=7; )
HAND2   ENSSSCG00000009703 14:16038129-16040277    
HAO2   ENSSSCG00000006720 4:105784928-105808848 CR938722,CH242-150C11,4:105730208-105905927
(No clone quality info on bE150C11) 		 
HAP1   ENSSSCG00000017427 12:18653375-18661915   CU928665,CH242-332K23,12:18640749-18703424
(Clone quality: bE332K23 on chr=12; Num_of_Contigs=7; )
HAPLN1 ENSSSCG00000014137 2:81267497-81303632    
HAPLN1 location ⇒ 2:81268022-81267505   CU463168,CH242-402A9,2:81126985-81296405
(Clone quality: bE402A9 on chr=2; Num_of_Contigs=1; )
HAPLN1 location ⇒ 2:81270312-81270007   CU463168,CH242-402A9,2:81126985-81296405
(Clone quality: bE402A9 on chr=2; Num_of_Contigs=1; )
HAPLN1 location ⇒ 2:81278107-81277732   CU463168,CH242-402A9,2:81126985-81296405
(Clone quality: bE402A9 on chr=2; Num_of_Contigs=1; )
Go to records:
1-49, 50-100, 101-150, 151-200, 201-250, 251-300, 301-350, 351-400, 401-450, 451-500, 501-550, 551-600, 601-650, 651-700, 701-32

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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