A Wish List of Genes for Annotation (version 3.26)

(Matches to BACs by their Genome Locations Based on Pig Genome Build v.9 (Data Downloads as of Mar. 7, 2010 )
Info: HINTS:
  ( Go to genes whose symbol start with: 1, 5, 7, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z )
 Search results:
Show Finished BAC Show unFinished BAC
User Gene List Genome Location
(Chr.:start-end)
 Fell within Finished BACs
(Contig, BACname, Chr.:Start-End)
 Fell within Unfinished Clones
(SeqName, Chr.:Start-End)
Symbol Owner/ Status Ensembl Gene ID
5S_rRNA   ENSSSCG00000019468 10:52758138-52758242   CU855590,CH242-82O4,10:52674440-52818359
(Clone quality: bE82O4 on chr=10; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000018484 4:84259711-84259830   CU407291,CH242-513E17,4:84256607-84284155
(Clone quality: bE513E17 on chr=4; Num_of_Contigs=7; )
5S_rRNA   ENSSSCG00000019464 1:133905958-133906075   CU861634,CH242-463N18,1:133885270-133939793
(Clone quality: bE463N18 on chr=1; Num_of_Contigs=7; )
5S_rRNA   ENSSSCG00000018281 7:42326066-42326179 CT737369,CH242-217D23,7:42195308-42367650
(Clone quality: bE217D23 on chr=7; Num_of_Contigs=4; ) 		 
5S_rRNA   ENSSSCG00000018272 12:41234972-41235096   FP016089,CH242-119K20,12:41221943-41257556
(Clone quality: bE119K20 on chr=12; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000019577 8:71460851-71460963   CU914727,CH242-90H5,8:71438750-71470903
(Clone quality: bE90H5 on chr=8; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000019611 2:56542481-56542595   CU467894,CH242-250L18,2:56479706-56598628
(Clone quality: bE250L18 on chr=2; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018551 6:103769473-103769603   CU457759,CH242-261B4,6:103715670-103779620
(Clone quality: bE261B4 on chr=6; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000019623 16:57733714-57733820   CU571276,CH242-1N19,16:57713485-57750210
(Clone quality: bE1N19 on chr=16; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000019635 7:45876014-45876123 CT009542,CH242-272H8,7:45714746-45890644
(Clone quality: bE272H8 on chr=7; Num_of_Contigs=13; ) 		 
5S_rRNA   ENSSSCG00000018199 12:41347692-41347799   CU469262,CH242-13F24,12:41331851-41361647
(Clone quality: bE13F24 on chr=12; Num_of_Contigs=8; )
5S_rRNA   ENSSSCG00000018464 7:75954841-75954934 CT737415,CH242-158E1,7:75875163-76052284
(Clone quality: bE158E1 on chr=7; Num_of_Contigs=2; ) 		 
5S_rRNA   ENSSSCG00000018348 4:93028125-93028233   CU137698,CH242-71N12,4:93022736-93028805
(Clone quality: bE71N12 on chr=4; Num_of_Contigs=19; )
5S_rRNA   ENSSSCG00000018367 9:125694523-125694643   CU856114,CH242-415I14,9:125693351-125695512
(Clone quality: bE415I14 on chr=9; Num_of_Contigs=22; )
5S_rRNA   ENSSSCG00000019448 6:43268883-43269009   FP245399,CH242-395N22,6:43260358-43277571
(Clone quality: bE395N22 on chr=6; Num_of_Contigs=7; )
5S_rRNA   ENSSSCG00000019344 11:64386967-64387082   CU633813,CH242-267B4,11:64380989-64418055
(Clone quality: bE267B4 on chr=11; Num_of_Contigs=16; )
5S_rRNA   ENSSSCG00000019458 15:64378281-64378390   CU466543,CH242-517B13,15:64368328-64379674
(No clone quality info on )
5S_rRNA   ENSSSCG00000018405 2:81368236-81368349   CU855516,CH242-264F14,2:81296406-81478555
(Clone quality: bE264F14 on chr=2; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000019339 1:165676576-165676681   CU459053,CH242-153F11,1:165604492-165731324
(Clone quality: bE153F11 on chr=1; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000018411 1:203326467-203326587   CU606882,CH242-508F6,1:203324237-203331580
(Clone quality: bE508F6 on chr=1; Num_of_Contigs=17; )
5S_rRNA   ENSSSCG00000019326 5:85895064-85895170   CU407141,CH242-145D12,5:85876116-85904949
(Clone quality: bE145D12 on chr=5; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000019316 10:16860231-16860349   CU571186,CH242-132I12,10:16826399-16943184
(Clone quality: bE132I12 on chr=10; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018358 6:114504836-114504951   CU657962,CH242-239M20,6:114446586-114584701
(Clone quality: bE239M20 on chr=6; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000019636 3:91224478-91224597   CU896590,CH242-1M11,3:91219858-91226916
(Clone quality: bE1M11 on chr=3; Num_of_Contigs=19; )
5S_rRNA   ENSSSCG00000018189 4:107355866-107355963   FP085489,CH242-167A22,4:107354639-107361650
(Clone quality: bE167A22 on chr=4; Num_of_Contigs=11; )
5S_rRNA   ENSSSCG00000019072 5:15722946-15723061   CU914420,CH242-302G7,5:15715050-15727591
(Clone quality: bE302G7 on chr=5; Num_of_Contigs=10; )
5S_rRNA   ENSSSCG00000018242 9:125684749-125684869   CU481895,CH242-502F19,9:125682992-125685561
(Clone quality: bE502F19 on chr=9; Num_of_Contigs=35; )
5S_rRNA   ENSSSCG00000019179 X:97099777-97099893 CU928929,CH242-445E7,X:97050124-97103584
(Clone quality: bE445E7 on chr=X; Num_of_Contigs=7; ) 		 
5S_rRNA   ENSSSCG00000019160 1:254393457-254393567   CU606996,CH242-125C18,1:254382935-254394908
(Clone quality: bE125C18 on chr=1; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000018537 4:107241806-107241903   CU469418,CH242-264L10,4:107154030-107294999
(Clone quality: bE264L10 on chr=4; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000018750 5:82216484-82216601   CU896549,CH242-102O23,5:82171838-82216702
(Clone quality: bE102O23 on chr=5; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000018226 16:70852440-70852536   CU570717,CH242-191P3,16:70847544-70921707
(Clone quality: bE191P3 on chr=16; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000019117 9:36313849-36313965   CU930036,CH242-311K23,9:36304876-36326286
(Clone quality: bE311K23 on chr=9; Num_of_Contigs=16; )
5S_rRNA   ENSSSCG00000019116 17:10042677-10042783   CU856669,CH242-396I7,17:10042347-10046672
(Clone quality: bE396I7 on chr=17; Num_of_Contigs=9; )
5S_rRNA   ENSSSCG00000018224 14:140475879-140475992   CU633392,CH242-29E19,14:140462349-140518864
(Clone quality: bE29E19 on chr=14; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000018223 1:220734475-220734594   CU468068,CH242-365H21,1:220716916-220741234
(Clone quality: bE365H21 on chr=1; Num_of_Contigs=16; )
5S_rRNA   ENSSSCG00000018521 1:137931466-137931581   CU062472,CH242-35N5,1:137912426-138069305
(Clone quality: bE35N5 on chr=1; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018267 1:276171547-276171651   CU041257,CH242-395C13,1:276166981-276180113
(Clone quality: bE395C13 on chr=1; Num_of_Contigs=10; )
5S_rRNA   ENSSSCG00000019665 4:13473126-13473243   CU469059,CH242-75N15,4:13464275-13477137
(Clone quality: bE75N15 on chr=4; Num_of_Contigs=3; )
5S_rRNA   ENSSSCG00000018150 16:45030080-45030198   FP103012,CH242-101B11,16:45024660-45033162
(Clone quality: bE101B11 on chr=16; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018119 1:97528140-97528248   FP102323,CH242-235J13,1:97526792-97569279
(Clone quality: bE235J13 on chr=1; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000019670 13:76450702-76450815   CU914809,CH242-61A24,13:76439987-76459488
(Clone quality: bE61A24 on chr=13; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000019023 6:57549980-57550089   FP236394,CH242-241E3,6:57543304-57556128
(Clone quality: bE241E3 on chr=6; Num_of_Contigs=13; )
5S_rRNA   ENSSSCG00000019017 14:44026909-44027028   CT827877,CH242-282M5,14:43927031-44041155
(Clone quality: bE282M5 on chr=14; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018219 8:32545195-32545287   FP016039,CH242-161I20,8:32538330-32551779
(Clone quality: bE161I20 on chr=8; Num_of_Contigs=4; )
5S_rRNA   ENSSSCG00000018222 15:108516339-108516445   CU463825,CH242-27H3,15:108507390-108518536
(Clone quality: bE27H3 on chr=15; Num_of_Contigs=2; )
5S_rRNA   ENSSSCG00000018509 7:79508320-79508445   CT826379,CH242-47O3,7:79498658-79689438
(Clone quality: bE47O3 on chr=7; Num_of_Contigs=1; )
5S_rRNA   ENSSSCG00000019187 14:44064499-44064618   CU407050,CH242-231C9,14:44041156-44092712
(Clone quality: bE231C9 on chr=14; Num_of_Contigs=5; )
5S_rRNA   ENSSSCG00000019015 1:10978041-10978159   CU570845,CH242-32I8,1:10963487-10980136
(Clone quality: bE32I8 on chr=1; Num_of_Contigs=10; )
Go to records:
1-49, 50-100, 101-12

Report problems to zhuiastate.edu $version: 3.26; Updates: Mar. 6, 2010; Apr. 20, 2010; Aug 21, 2010
Related publications:
Martien Groenen, Alan Archibald, Hirohide Uenishi, Christopher Tuggle, Yasuhiro Takeuchi, Max Rothschild, Claire Rogel-Gaillard, ... Denis Milan, Hendrik-Jan Megens, ... Zhi-Liang Hu, Sean J. Humphray, ... James M. Reecy, ..., Gary A. Rohrer, ... Shuhong Zhao, Jane Rogers, Carol Churcher & Lawrence B. Schook. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491, 393-398 (15 November 2012).

 

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