From listmaster animalgenome.org Wed Nov 6 11:18:58 2019
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From: "Hu, Zhiliang [AN S]" <zhu iastate.edu>
Subject: Re: Pseudoautosomal boundary (PAB) in Pig reference
genome
Postmaster: submission approved by list moderator
To: Members of AnGenMap <angenmap animalgenome.org>
Date: Wed, 06 Nov 2019 11:18:58 -0600
Amabel,
The closest description of pig PAR is found in Skinner et al. (2015)
"The pig X and Y Chromosomes: structure, sequence, and evolution"
https://genome.cshlp.org/...t/26/1/130.full.html
Zhiliang
On 11/06/2019, 10:57 AM, <amabel.tenghe gmail.com> wrote:
Dear all,
In cattle, the pseudoautosomal boundary (PAB) of the X chromosome has
been mapped to position ChrX: 133,300,518 (Johnson et al., 2019). This
information is important in treating the X chromosome appropriately in
genetic analysis that involve imputation and GWAS.
Does anyone know the position of PAB on the Pig reference genome or an
article that I can be referred to?
Best regards,
Amabel
Reference
Johnson, T. et al. (2019) ‘Short communication: Identification of the
pseudoautosomal region in the Hereford bovine reference genome assembly
ARS-UCD1.2’, Journal of Dairy Science. American Dairy Science
Association, 102(4), pp. 3254–3258. doi: 10.3168/jds.2018-15638.
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