Release 56
(Apr 24, 2025)
Gene search results:
Gene centric view
Trait centric view
Search:
Trait name:
Longissimus muscle depth
Ontology terms:
VT:1000575
28 genes are associated with this trait, with QTL/association found
ABCD4: ATP binding cassette subfamily D member 4
evidenced by:
QTL:172686
;
QTL:172688
;
QTL:172690
;
ADIPOQ: Adiponectin, C1Q and collagen domain containing
evidenced by:
QTL:30914
;
AGPAT5: 1-acylglycerol-3-phosphate O-acyltransferase 5
evidenced by:
QTL:261626
;
ANKS1A: Ankyrin repeat and sterile alpha motif domain containing 1A
evidenced by:
QTL:172680
;
QTL:172682
;
QTL:172716
;
ARHGAP15: Rho GTPase activating protein 15
evidenced by:
QTL:259503
;
EHMT2: Euchromatic histone-lysine N-methyltransferase 2
evidenced by:
QTL:172711
;
FAM83B: Family with sequence similarity 83 member B
evidenced by:
QTL:172625
;
FTO: Fat mass and obesity associated
evidenced by:
QTL:32788
;
HSF5: Heat shock transcription factor family member 5
evidenced by:
QTL:216310
;
INPPL1: Inositol polyphosphate phosphatase-like 1
evidenced by:
QTL:18531
;
ITGA8: Integrin subunit alpha 8
evidenced by:
QTL:216312
;
KHDRBS2: KH domain containing, RNA binding, signal transduction associated 2
evidenced by:
QTL:172672
;
QTL:172674
;
LEPR: Leptin receptor
evidenced by:
QTL:296736
;
LHPP: Phospholysine phosphohistidine inorganic pyrophosphate phosphatase
evidenced by:
QTL:259500
;
LOC100153159: Tubulointerstitial nephritis antigen-like
evidenced by:
QTL:172623
;
NME1: NME/NM23 nucleoside diphosphate kinase 1
evidenced by:
QTL:12116
;
NUDT3: Nudix (nucleoside diphosphate linked moiety X)-type motif 3
evidenced by:
QTL:172617
;
QTL:172698
;
PACSIN1: Protein kinase C and casein kinase substrate in neurons 1
evidenced by:
QTL:172619
;
QTL:172620
;
QTL:172700
;
QTL:172702
;
PGBD1: N/piBac transposable element derived 1
evidenced by:
QTL:172709
;
PID1: Phosphotyrosine interaction domain containing 1
evidenced by:
QTL:286834
;
SCGN: Secretagogin, EF-hand calcium binding protein
evidenced by:
QTL:172707
;
SERPINE1: Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
evidenced by:
QTL:65877
;
QTL:65878
;
SNRPC: Small nuclear ribonucleoprotein polypeptide C
evidenced by:
QTL:172614
;
QTL:172717
;
TCAP: Titin-cap (telethonin)
evidenced by:
QTL:28233
;
VRTN: Vertebrae development homolog (pig)
evidenced by:
QTL:172692
;
QTL:259481
;
ZNF165: Zinc finger protein 165
evidenced by:
QTL:172624
;
ZSCAN12: Zinc finger and SCAN domain containing 12
evidenced by:
QTL:172666
;
ZSCAN26: Zinc finger and SCAN domain containing 26
evidenced by:
QTL:172662
;
418 correlations are found involving
Longissimus muscle depth
Map them by chromosomes:
Chr.3
,
Chr.6
,
Chr.7
,
Chr.9
,
Chr.10
,
Chr.12
,
Chr.13
,
Chr.14
,
Chr.15
.
Download
to download the data displayed on this page in a tabulated .csv format.
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USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications
.
Contact:
Bioinformatics Team