Release 56
(Apr 24, 2025)

QTL 15136 Description:

 Trait Information
Trait name: IPN virus survival rate Vertebrate Trait Ontology: Response to viral infection trait
Reported name: IPN virus survival rate Product Trait Ontology: n/a
Symbol: IPNSR Clinical Measurement Ontology: Disease process measurement
 QTL Map Information
Chromosome:16
QTL Peak Location:45.8 (cM)
QTL Span:n/a
32.9-33.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:OmyOGT4TUF
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:Microsatellites
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
LikelihoodR10.4
P_values0.00125
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Rainbow trout were from a cross between an IPN virus-resistant strain and an IPN virus-susceptible strain.
     Breeds associated:
    n/a
    Design:Backcross progeny were genotyped at 51 loci throughout the genome and analyzed for susceptibility to IPN virus.
    Analysis:A chi-squared analysis was used.
    Software:Map Manager QT28b
    Notes: 
    Links:Edit

     Reference
    Authors:Ozaki, A; Sakamoto, T; Khoo, S; Nakamura, K; Coimbra, M R; Akutsu, T; Okamoto, N
    Affiliation:Department of Aquatic Biosciences, Tokyo University of Fisheries, Konan 4, Minato, Tokyo 108-8477, Japan
    Title:Quantitative trait loci (QTLs) associated with resistance/susceptibility to infectious pancreatic necrosis virus (IPNV) in rainbow trout (Oncorhynchus mykiss).
    Journal:Molecular genetics and genomics : MGG, 2001, 265(1): 23-31
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #11370869
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  • Cite this Data:

    Animal QTLdb: QTL15136 was published in 2001, and was curated into QTLdb on 2011-12-22. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:15136

     

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