| QTL Map Information |
|---|
| Chromosome: | 11 |
| QTL Peak Location: | n/a |
| QTL Span: | 2819.41-2819.42 (cM)
49.9-49.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs68887600 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 2.28E-5 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Thoroughbred, American Saddlebred, Standardbred, and Quarter Horses. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina EquineSNP50 BeadChip and the Sequenom MassARRAY system and analyzed for susceptibility to equine arteritis virus. A total of 42,506 SNPs were evaluated. |
| Analysis: | Association (chi-square) in the additive model and linkage disequilibrium were used. |
| Software: | |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Go YY, Bailey E, Cook DG, Coleman SJ, Macleod JN, Chen KC, Timoney PJ, Balasuriya UB |
| Affiliation: | Maxwell H. Gluck Equine Research Center, Department of Veterinary Science, University of Kentucky, Lexington, KY 40546-0099, USA |
| Title: | Genome-wide association study among four horse breeds identifies a common haplotype associated with in vitro CD3+ T cell susceptibility/resistance to equine arteritis virus infection |
| Journal: | Journal of virology, 2011, 85(24): 13174-84 |
| Links: |
PubMed | Abstract | List all data
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