| QTL Map Information |
|---|
| Chromosome: | 26 |
| QTL Peak Location: | 49.90 (cM) |
| QTL Span: | 49.90-49.90 (cM)
33.4-33.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69407496 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Fell and Dales ponies. |
| Breeds associated:
|
| Design: | Animals were genotyped for a panel of 228 microsatellite markers and with the Illumina EquineSNP50 Infinium BeadChip and analyzed for incidence of foal immunodeficiency syndrome. |
| Analysis: | A parametric linkage analysis and basic case-control association analysis were performed. |
| Software: | SUPERLINK, ARLEQUIN, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Fox-Clipsham LY, Carter SD, Goodhead I, Hall N, Knottenbelt DC, May PD, Ollier WE, Swinburne JE |
| Affiliation: | Animal Health Trust, Newmarket, UK |
| Title: | Identification of a mutation associated with fatal Foal Immunodeficiency Syndrome in the Fell and Dales pony |
| Journal: | PLoS genetics, 2011, 7(7): e1002133 |
| Links: |
PubMed | Abstract | List all data
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