| QTL Map Information |
|---|
| Chromosome: | 25 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
29.9-29.9 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs69348671 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | - |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were horses that presented to equine veterinarians for overall poor performance or back soreness, the majority of which were American Quarter Horses and Warmblood horses. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina Equine SNP70 array and GWAS was performed for "kissing spines" grade, based on radiographical assessment of severity of impingement and overriding of spinous processes. A total of 61,229 SNPs were used for analysis. |
| Analysis: | A linear model was used. |
| Software: | PLINK v1.90b6.24, SAS JMP Pro V15 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Patterson Rosa L, Whitaker B, Allen K, Peters D, Buchanan B, McClure S, Honnas C, Buchanan C, Martin K, Lundquist E, Vierra M, Foster G, Brooks SA, Lafayette C |
| Affiliation: | Etalon, Inc, Menlo Park, CA 94025, USA |
| Title: | Genomic loci associated with performance limiting equine overriding spinous processes (kissing spines) |
| Journal: | Research in veterinary science, 2022, 150: 65-71 |
| Links: |
PubMed | Abstract | List all data
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