| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs69559050 |
| Peak: | |
| Lower, "Significant": | rs69585801 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | - |
| Test base: | - |
| Threshold significance level: | Significant |
 |
VARIANCE | 14.06% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Quarter Horses. |
| Breeds associated:
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| Design: | Animals were genotyped using either the Illumina Equine SNP50 BeadChip or SNP70 BeadChip. Following genotype imputation, GWAS were performed for position and number of hair whorls. A total of 53,828 SNPs were used for analysis. |
| Analysis: | Single-step GBLUP was used. |
| Software: | PEGSF90, THRGIBBS1F90, POSTGIBBSF90, POSTGSF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lima DFPA, da Cruz VAR, Pereira GL, Curi RA, Costa RB, de Camargo GMF |
| Affiliation: | Escola de Medicina Veterinária e Zootecnia, Universidade Federal da Bahia (UFBA), Salvador 40170-110, BA, Brazil |
| Title: | Genomic Regions Associated with the Position and Number of Hair Whorls in Horses |
| Journal: | Animals : an open access journal from MDPI, 2021, 11(10):2925 |
| Links: |
PubMed | Abstract | List all data
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