Release 56
(Apr 24, 2025)

QTL 56300 Description:

 Trait Information
Trait name: Sperm counts Vertebrate Trait Ontology: Sperm quantity
Reported name: (n/a) Product Trait Ontology: n/a
Symbol: SEMENQ Clinical Measurement Ontology: Sperm count
 QTL Map Information
Chromosome:X
QTL Peak Location:4.07 (cM)
QTL Span:4.07-4.07 (cM)
4.3-4.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs29010277
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Significant
P_values0.00711
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Polish Holstein-Friesian bulls.
     Breeds associated:
    Design:Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for semen production traits. A total of 45,678 SNPs were used for analysis.
    Analysis:A mixed model was used.
    Software:ASReml
    Notes: 
    Links:Edit

     Reference
    Authors:Suchocki T, Szyda J
    Affiliation:Wroclaw University of Environmental and Life Sciences, Department of Genetics, Biostatistics Group, Kozuchowska 7, 51-631 Wroclaw, Poland
    Title:Genome-wide association study for semen production traits in Holstein-Friesian bulls
    Journal:Journal of dairy science, 2015, 98(8):5774-80
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Per ejaculate
    User inputs on reference #26051317
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  • Cite this Data:

    Animal QTLdb: QTL56300 was published in 2015, and was curated into QTLdb on 2015-07-01. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:56300

     

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