| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 83.08 (cM) |
| QTL Span: | 83.08-83.08 (cM)
71.2-71.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109165576 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #42109
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for 31 production, health, reproduction, and conformation traits. A total of 45,878 SNPs were used for analysis. |
| Analysis: | Least-squares regression was used. |
| Software: | epiSNP, R software, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Cole JB, Wiggans GR, Ma L, Sonstegard TS, Lawlor TJ Jr, Crooker BA, Van Tassell CP, Yang J, Wang S, Matukumalli LK, Da Y |
| Affiliation: | Department of Animal Science, University of Minnesota, St. Paul, Minnesota, USA |
| Title: | Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows |
| Journal: | BMC Genomics, 2011, 12:408 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Predicted transmitting ability |
User inputs on reference #21831322
Add your comments
Note similar findings
Note contradictions
|
